BAC Information

Click to search

BAC

Clone NameB6Ng01-260E12
Chromosome14 (Build37)
Map Location 22,923,920 - 22,925,038
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260E12.bB6Ng01-260E12.g
ACCGA065242GA065243
length8851,113
definitionB6Ng01-260E12.b B6Ng01-260E12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacaaaatccacctggccctggaaattttttagtagggggat
atctagttactgcttttattttattggttgttatggatctgtttaaatta
tttacttcatattaactttgataggctatatacatctagaaattcatcta
tttattttagattttccagtttgatgaaacatagctttctttcttttttt
tcccattttttattaggtatttagctcatttacatttccaatgctatacc
aaaagtcccccatacccacccacccccactcccctacccacccactcccc
ctttttggccctggcgttcccctgtactggggcatataaagtttgcgtgt
ccaatgggcctctctttgcagtgatggccgactaggccatcttttgatac
atatgcagctagagtcaagagctccggggtactggttagttcataatgtt
gttccacctatagggttgcagatccctttagctccttgggtactttctct
agctcctccattgggagccctgtgatccatccattagctgactgtgagca
tccacttctgtgtttgctaggccccggcatagtctcacaagagacagcta
catctgggtcctttcgataaaatcttgctagtgtatgcaatggtgtcagc
gtttggatgctgattatggggtggatccctggatatggcagtatctacat
ggtccatcctttcatctcaactccaaactttgtctctgtaactccttcca
tgggtgtttgttcccacttctaaggaggggcatagtgtccacacttcagt
cttcaattttcttgagtttcatgtgtttaggaattgtatcttaatatctt
ggggtatcctacgtttttgggctaataatccactt
gaattctcacgcaactttcccatcggtcaagacattgttattgttatttt
tcaaactaaaaaaaacaaaaaaacaaaacaaaaaacagacaagtatattt
tcactgtagaacattgagaaaatataaaatccactaagaggaagagataa
atactcagaatcatgctatcaggatcccccaaaaaatgtttttaaggagt
ttctttatttttaactatggatatgtatatctatgcatgaatgtacatga
gtgcaggtacctatggaggacagaagccttgggtccttggagctggggtt
acaagcagttatgagctgccatgtgggtactgggagcctttgcaagaaag
gcaaatgctcttaactctaagccatctcatcagctcaccacagtccattc
ttataacttccatcaaatgatgttactcatcttgtaatcttttcacttca
gggcttcaaggcaacagaaggctcgtggactctacccagccactcttact
tcaaagtctgtctgcatattatttaaaattcggaaatcaaccaataattc
actatggggattaaaacaataaaaagcactggaaagcaaaccctaccatc
caggctcatagtgtgaagttaggatttaaaattcatacttatatgcatac
atatataatgcatagttgtacttggtatatatcatattatgtacagtagc
atagaaaagaagagacaaccacactgtgcaatgagtagttgtggtcaggc
agtgcaggacatgaacatcaaaagaaatggatatagctgtggaaattata
aaaggctttggaataaacacagctgagtgaggcaggccctaaaaaggagg
attagtccagcaagttgggtcgagaatgagataaacacaagaaaacacaa
atacatttaggccaggattgggaagaccagctgggcaagtttatagtaac
ttatactacaggaggaaaagtggtctggggtcacatggcgaggggccgat
ttcccttctataaaggcttcaaatgcagttacactaaccccacaggcacc
atcagtgcagactgatccctaccacctgagcatttcacctttatctctag
atcaagggcccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22923920_22925038
seq2: B6Ng01-260E12.g_64_1176 (reverse)

seq1  TTGGGCCCTTGATCTAGAGATAAAGGTGAAAATGCTCAGGTGGTTAGGGA  50
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  TTGGGCCCTTGATCTAGAGATAAAGGTG-AAATGCTCAGGTGG-TAGGGA  48

seq1  TCAGTCTGGCACTGATGGTGCCTGGTGGGGTTAGTGTAACTGCATTTTGA  100
      ||||||| ||||||||||||||| |||||||||||||||||||| |||||
seq2  TCAGTCT-GCACTGATGGTGCCT-GTGGGGTTAGTGTAACTGCA-TTTGA  95

seq1  AGCCTTTATAGAAGGGAAAATCGGCCCCTCGCCATGTGACCCCAGACCAC  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGCCTTTATAGAAGGG-AAATCGGCCCCTCGCCATGTGACCCCAGACCAC  144

seq1  TTTTCCTCCCTGTAGTATAAGTTACTATAAACTTGCCCAGCTGGTC-TCC  199
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTCCT-CCTGTAGTATAAGTTACTATAAACTTGCCCAGCTGGTCTTCC  193

seq1  CAATCCTGGCCTAAATGTATTTGTGTTTTCTTGTGTTTATCTCATTCTCG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGGCCTAAATGTATTTGTGTTTTCTTGTGTTTATCTCATTCTCG  243

seq1  ACCCAACTTGCTGGACTAATCCTCCTTTTTAGGGCCTGCCTCACTCAGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACTTGCTGGACTAATCCTCCTTTTTAGGGCCTGCCTCACTCAGCT  293

seq1  GTGTTTATTCCAAAGCCTTTTATAATTTCCACAGCTATATCCATTTCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATTCCAAAGCCTTTTATAATTTCCACAGCTATATCCATTTCTTT  343

seq1  TGATGTTCATGTCCTGCACTGCCTGACCACAACTACTCATTGCACAGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCATGTCCTGCACTGCCTGACCACAACTACTCATTGCACAGTGT  393

seq1  GGTTGTCTCTTCTTTTCTATGCTACTGTACATAATATGATATATACCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTCTTCTTTTCTATGCTACTGTACATAATATGATATATACCAAG  443

seq1  TACAACTATGCATTATATATGTATGCATATAAGTATGAATTTTAAATCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTATGCATTATATATGTATGCATATAAGTATGAATTTTAAATCCT  493

seq1  AACTTCACACTATGAGCCTGGATGGTAGGGTTTGCTTTCCAGTGCTTTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACACTATGAGCCTGGATGGTAGGGTTTGCTTTCCAGTGCTTTTT  543

seq1  ATTGTTTTAATCCCCATAGTGAATTATTGGTTGATTTCCGAATTTTAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTAATCCCCATAGTGAATTATTGGTTGATTTCCGAATTTTAAAT  593

seq1  AATATGCAGACAGACTTTGAAGTAAGAGTGGCTGGGTAGAGTCCACGAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCAGACAGACTTTGAAGTAAGAGTGGCTGGGTAGAGTCCACGAGC  643

seq1  CTTCTGTTGCCTTGAAGCCCTGAAGTGAAAAGATTACAAGATGAGTAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTGCCTTGAAGCCCTGAAGTGAAAAGATTACAAGATGAGTAACA  693

seq1  TCATTTGATGGAAGTTATAAGAATGGACTGTGGTGAGCTGATGAGATGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGATGGAAGTTATAAGAATGGACTGTGGTGAGCTGATGAGATGGC  743

seq1  TTAGAGTTAAGAGCATTTGCCTTTCTTGCAAAGGCTCCCAGTACCCACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTTAAGAGCATTTGCCTTTCTTGCAAAGGCTCCCAGTACCCACAT  793

seq1  GGCAGCTCATAACTGCTTGTAACCCCAGCTCCAAGGACCCAAGGCTTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCATAACTGCTTGTAACCCCAGCTCCAAGGACCCAAGGCTTCTG  843

seq1  TCCTCCATAGGTACCTGCACTCATGTACATTCATGCATAGATATACATAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATAGGTACCTGCACTCATGTACATTCATGCATAGATATACATAT  893

seq1  CCATAGTTAAAAATAAAGAAACTCCTTAAAAACATTTTTTGGGGGATCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTTAAAAATAAAGAAACTCCTTAAAAACATTTTTTGGGGGATCCT  943

seq1  GATAGCATGATTCTGAGTATTTATCTCTTCCTCTTAGTGGATTTTATATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCATGATTCTGAGTATTTATCTCTTCCTCTTAGTGGATTTTATATT  993

seq1  TTCTCAATGTTCTACAGTGAAAATATACTTGTCTGTTTTTTGTTTTGTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATGTTCTACAGTGAAAATATACTTGTCTGTTTTTTGTTTTGTTT  1043

seq1  TTTTGTTTTTTTTAGTTTGAAAAATAACAATAACAATGTCTTGACCGATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTAGTTTGAAAAATAACAATAACAATGTCTTGACCGATG  1093

seq1  GGAAAGTTGCGTGAGAATTC  1119
      ||||||||||||||||||||
seq2  GGAAAGTTGCGTGAGAATTC  1113