BAC Information

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BAC

Clone NameB6Ng01-261D17
Chromosome14 (Build37)
Map Location 108,879,954 - 108,881,109
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261D17.bB6Ng01-261D17.g
ACCGA065953GA065954
length1,1631,152
definitionB6Ng01-261D17.b B6Ng01-261D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatggaaggactgagaagcacttgaaaaaatg
ttcaacatctttaatcatgagggaaatgcaaatcaaaacaaccctgagat
ttcacctctaccagtcagaatggctagggtcaaaaattcaggtgacagca
gatgctggtgaggatatggaggaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctgcaaatcaatctggcagttcctcag
aaaactggacatagtagtacaggaagatccaacaatacctatcatgggca
tatacccagaatgttccaactggtaataaggacacatgttccactatgtt
catagcagccttatttgtaatagccagaagctggaaagatcccagatgcc
cctcaacagaggaatggatacagaaattgtgatacatttatacaatggtg
tactactcagctattaaaaacaatgaatttatgaaattcttaggcaaatg
gatatatctgcaggatatcatcctgagtgaggcaacccaatcacaaaaga
agtcacttgatatgcactcactgataagtggatattagcccagaaaccta
gaacacccaagatacaatttgcaaaacacaagaaaatcaagaagaccaat
gcatggatacttcattcctccctagaacagggaacaaaatacccatggaa
ggagttacagggaaaacgtttggagctaagaggaatggatggaccatcca
gagactgccccacccagggatacatcccatagtcagccaccaaaggcaga
cactatttcatatgccagcaagattttgctgaaaggaccctgatatagct
gtctcatatgaggctatgccggtgcctggcaaatacagaagtggatgttc
acagtcatctattggatggaacacaggtccccagtggaggagctagagaa
agtaccaaaggagctgaaggggtctgcaatcctattgctggaaaaacata
tgacctaatcagtaccccagagctcgtgtctctagctgcatatgtagtag
aagaatgctagtcagcataatgagagagagccccttgtctgccaaccttt
atatgtcccagtaagggtatgccagggtccagagtgggaatggggggggc
catgtaggggacc

gaattcagtgaattaactacaatgttctgaggcttcttcgtattaaccag
atggactgaactaatggcaaccttgcagtagcaattacattttatttcct
atgtagcttagagcaagtacagatatattaacccaggaaaattcaggatg
atgagagaggaacagcattcaagcatgatttgaaaaacatatggcttttg
tttaaacttctgagccatacaaactattcattacaattgaagaaacagta
aagcagaagagccaagcaagagagaaatagaaaacttatgttagttaact
aaaatctaaaatatttacttagaacatttgttaagttaaggagaaggaag
acaggatgatagggagacaattttattctttgtaattttgcagcagaatt
ataaagataaaaacacagatacgactatgttaccaagatagttctgaaca
aatgcttacaaaaattttacaatgaacttttgtgagttatgtgcagagac
tagggagtaaagaatccattgaatatgtttaaaactaatttgttttcatt
tatattttcagtcttccatagtagaaactgaatctcagcagagtgctaag
tcatgtgctagttccctgatctattccttagaaatatactttctgtcacg
agcatatgtttggatgaatatatagatttttcactttttgctcatggtct
aattataaagggcagcaaatgtaattttaatataaatgtattcagtaaat
taatatagtccctgttgttttcatcctagctaattccccaataacgacac
aaaaagttcaacatttatttgaagtatattaccttaatacttgggcagtc
aattgatctattttaatcctctaagctaatttggggacaccttcagccaa
aatctcagtaatacttggcatttaaagcctttccattctccagctgaact
cttatgatgtctactctcctcctttggctcatctgctttactcttctctc
tcttcactttaaaaacattattattgtgggggtttactgtccatgttttc
ttttctgcattctgatcattggaatttctccccaatactgtaataacttc
acaacacatataggctgtctcacttgaacttctatgttcccttctaaatt
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108879954_108881109
seq2: B6Ng01-261D17.g_66_1217

seq1  GAATTCAGTGAATTAACTACAATGTTCTGAGGCTTCTTCGTATTAACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAATTAACTACAATGTTCTGAGGCTTCTTCGTATTAACCAG  50

seq1  ATGGACTGAACTAATGGCAACCTTGCAGTAGCAATTACATTTTATTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTGAACTAATGGCAACCTTGCAGTAGCAATTACATTTTATTTCCT  100

seq1  ATGTAGCTTAGAGCAAGTACAGATATATTAACCCAGGAAAATTCAGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTTAGAGCAAGTACAGATATATTAACCCAGGAAAATTCAGGATG  150

seq1  ATGAGAGAGGAACAGCATTCAAGCATGATTTGAAAAACATATGGCTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGGAACAGCATTCAAGCATGATTTGAAAAACATATGGCTTTTG  200

seq1  TTTAAACTTCTGAGCCATACAAACTATTCATTACAATTGAAGAAACAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTCTGAGCCATACAAACTATTCATTACAATTGAAGAAACAGTA  250

seq1  AAGCAGAAGAGCCAAGCAAGAGAGAAATAGAAAACTTATGTTAGTTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAGAGCCAAGCAAGAGAGAAATAGAAAACTTATGTTAGTTAACT  300

seq1  AAAATCTAAAATATTTACTTAGAACATTTGTTAAGTTAAGGAGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTAAAATATTTACTTAGAACATTTGTTAAGTTAAGGAGAAGGAAG  350

seq1  ACAGGATGATAGGGAGACAATTTTATTCTTTGTAATTTTGCAGCAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATGATAGGGAGACAATTTTATTCTTTGTAATTTTGCAGCAGAATT  400

seq1  ATAAAGATAAAAACACAGATACGACTATGTTACCAAGATAGTTCTGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATAAAAACACAGATACGACTATGTTACCAAGATAGTTCTGAACA  450

seq1  AATGCTTACAAAAATTTTACAATGAACTTTTGTGAGTTATGTGCAGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTACAAAAATTTTACAATGAACTTTTGTGAGTTATGTGCAGAGAC  500

seq1  TAGGGAGTAAAGAATCCATTGAATATGTTTAAAACTAATTTGTTTTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTAAAGAATCCATTGAATATGTTTAAAACTAATTTGTTTTCATT  550

seq1  TATATTTTCAGTCTTCCATAGTAGAAACTGAATCTCAGCAGAGTGCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCAGTCTTCCATAGTAGAAACTGAATCTCAGCAGAGTGCTAAG  600

seq1  TCATGTGCTAGTTCCCTGATCTATTCCTTAGAAATATACTTTCTGTCACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCTAGTTCCCTGATCTATTCCTTAGAAATATACTTTCTGTCACG  650

seq1  AGCATATGTTTGGATGAATATATAGATTTTTCACTTTTTGCTCATGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGTTTGGATGAATATATAGATTTTTCACTTTTTGCTCATGGTCT  700

seq1  AATTATAAAGGGCAGCAAATGTAATTTTAATATAAATGTATTCAGTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAAGGGCAGCAAATGTAATTTTAATATAAATGTATTCAGTAAAT  750

seq1  TAATATAGTCCCTGTTGTTTTCATCCTAGCTAATTCCCCAATAACGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAGTCCCTGTTGTTTTCATCCTAGCTAATTCCCCAATAACGACAC  800

seq1  AAAAAGTTCAACATTTATTTGAAGTATATTACCTTAATACTTGGGCAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTCAACATTTATTTGAAGTATATTACCTTAATACTTGGGCAGTC  850

seq1  AATTGATCTATTTTAATCCTCTAAGCTAATTTGGGGACACCTTCAGCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATCTATTTTAATCCTCTAAGCTAATTTGGGGACACCTTCAGCCAA  900

seq1  AATCTCAGTAATACTTGGCATTTAAAGCC-TTCCATTCTCCAGCTGAACT  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATCTCAGTAATACTTGGCATTTAAAGCCTTTCCATTCTCCAGCTGAACT  950

seq1  CTTATGATGTCTACTCTCCTCCTTTGGCTCAATCTGCTTTACTCTTCTCT  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTATGATGTCTACTCTCCTCCTTTGGCTC-ATCTGCTTTACTCTTCTCT  999

seq1  CTCTTCACTTTAAAAAACATTATTATTGTGGGGTTTTACTGTCCATGTTT  1049
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  CTCTTCACTTT-AAAAACATTATTATTGTGGGGGTTTACTGTCCATGTTT  1048

seq1  --CTTTCTGCATTCTGATCATTTGAATTTCTCCCCAAATTACCTGTTAAT  1097
         ||||||||||||||||||| ||||||||||||||  || ||| ||||
seq2  TCTTTTCTGCATTCTGATCATTGGAATTTCTCCCCAA--TA-CTG-TAAT  1094

seq1  AACTTCAC-ACACATATTAGGCTGGGTCTCACTTGAACTCCTATG-TCCC  1145
      |||||||| ||||||| ||||||  |||||||||||||| ||||| ||||
seq2  AACTTCACAACACATA-TAGGCT--GTCTCACTTGAACTTCTATGTTCCC  1141

seq1  TTCTAAATTGC  1156
      |||||||||||
seq2  TTCTAAATTGC  1152


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