BAC Information

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BAC

Clone NameB6Ng01-261O01
Chromosome14 (Build37)
Map Location 39,726,857 - 39,727,771
singlet/doubletsinglet
Overlap geneNrg3
Upstream geneLOC100041521
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261O01.bB6Ng01-261O01.g
ACCGA066439GA066440
length1,186915
definitionB6Ng01-261O01.b B6Ng01-261O01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccattttcaatagctgagtagtactccattgtgcaaatgtacc
acattttctgtatccattcctttgttgaaggacatctgggatctttccag
caccaggctattataaataaggctgcaatgaacataatggggcatgtgtc
cttattgcatgttggagcatcttctgggtatgtgccaaagagtggtatag
ctgggtcctcaggtagtactatgtccaatttttaaaactgccaaactaat
ttccagagtggttgtacagcttgcaattctaccaataatggagtagtgtt
cctctttccccacatcctctccagcacctgccatcacctgagtttttgat
tttagccattcagactggtgtgaggcggaatctcagggttgttttgattt
gcatttccctgataactaaggatgttgaacatttctttaagtgcttctgg
gccatttgatattcctgagttgaaattctctgtttagctctgtacctcac
ttttaatagggttatttgagtctctggagtctaacttctttaattctttg
tatatattggatattagccgtctatcagatgtaggattggcaaagatatt
tgcccaatctgttggttgcctttatgtcctgttacattttgacagtgtcc
ttttcctcacagaacttttgcaattttaaaattgttttccagcttttaac
tctggggtagtgtctgtctttgtcactgaggtgcatttcctgtatgtagc
aaatgtcaggtcctccttacatatccagtctgttagtctatgtcttttta
ttggggaattcagttcactgatgttaagagttattaaataaaagtgattg
ttacttcctgttatttttgttgttagaggtggaattatgtctctgtggct
atcttcctttaggtttgttgaaagattactttcttgctttttctagggtg
tagtttccctccttgtgttagtgttttctatctattgccctttgtagggc
tggttttgtagaaagatgtgaattggttttgccatggatatcttgttttc
tctctccatggtaattgaagagtttgcttgggtgtagttgtctgagctgg
gtgtaatgttcacttgggtctgatgcactctgaacagatctctagcttca
tgctcctggtggaatgtcggggtaaattcggatgag

gaattcattaacatcctgcagacttttactttaaaagcatgctcttcaaa
ccttgagagactcatacacttagtgagtattttgttgttgttgttttgtt
ttgttttcatagtttgctgtggtttgattcttttacttttattgttgaaa
atggcaaggctgcttctagattctcaatagaagtaagactgcttcactga
ctacagaatcttcactgaagagaggggtgggatgcagacattataaggaa
tgacattcatttttctttttggttgatgtacagcatctgctgcaattttc
aaaagcagctgactaacataacaatacagcaatttcaacagaaatcattg
tgggctttttacgaacacacccaactgttgacatacattctgagtcaatg
cagtgactgtacagccaggaaaatattggtgttattcacagtataacgct
gtatggtgcctgtctaccttagaatgttgtctataccattcatttatcaa
gctacaagcacacccttatttggaggcattgcactatattttcctagatg
gagaaaggagcttctggcttcccttgaagagttcatgccactaattatta
tgagaagcagaagataaatagacgtttatatatgaacaaactgaggatat
cttcttagaaatcaaatttagtgaaaaaaaaagtattgaattattacgct
cactagtcctcagttgagcaatgtgtggatacattcaggagtacagaggg
ataacctgacaggacaggtcatcttagatttgaactctgtatgaaaatga
aaattgaataaatgaacagaacctaagaggctcatggaccttcattagct
gtatatatatatatatatatatatatatatatatatatatatatatatat
atatatatagatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_39726857_39727771
seq2: B6Ng01-261O01.g_68_982 (reverse)

seq1  TATATATATATATATATATATATATATATATATATATATATATATATATA  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTATATATATATATATATATATATATATATATATATATATATATA  50

seq1  TATATATATATATACAGCTAATGAAGGTCCATGAGCCTCTTAGGTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATACAGCTAATGAAGGTCCATGAGCCTCTTAGGTTCTGT  100

seq1  TCATTTATTCAATTTTCATTTTCATACAGAGTTCAAATCTAAGATGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTCAATTTTCATTTTCATACAGAGTTCAAATCTAAGATGACCT  150

seq1  GTCCTGTCAGGTTATCCCTCTGTACTCCTGAATGTATCCACACATTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTCAGGTTATCCCTCTGTACTCCTGAATGTATCCACACATTGCTC  200

seq1  AACTGAGGACTAGTGAGCGTAATAATTCAATACTTTTTTTTTCACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGGACTAGTGAGCGTAATAATTCAATACTTTTTTTTTCACTAAAT  250

seq1  TTGATTTCTAAGAAGATATCCTCAGTTTGTTCATATATAAACGTCTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTAAGAAGATATCCTCAGTTTGTTCATATATAAACGTCTATTT  300

seq1  ATCTTCTGCTTCTCATAATAATTAGTGGCATGAACTCTTCAAGGGAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGCTTCTCATAATAATTAGTGGCATGAACTCTTCAAGGGAAGCC  350

seq1  AGAAGCTCCTTTCTCCATCTAGGAAAATATAGTGCAATGCCTCCAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCCTTTCTCCATCTAGGAAAATATAGTGCAATGCCTCCAAATAA  400

seq1  GGGTGTGCTTGTAGCTTGATAAATGAATGGTATAGACAACATTCTAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGCTTGTAGCTTGATAAATGAATGGTATAGACAACATTCTAAGGT  450

seq1  AGACAGGCACCATACAGCGTTATACTGTGAATAACACCAATATTTTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCACCATACAGCGTTATACTGTGAATAACACCAATATTTTCCTG  500

seq1  GCTGTACAGTCACTGCATTGACTCAGAATGTATGTCAACAGTTGGGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACAGTCACTGCATTGACTCAGAATGTATGTCAACAGTTGGGTGTG  550

seq1  TTCGTAAAAAGCCCACAATGATTTCTGTTGAAATTGCTGTATTGTTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAAAAAGCCCACAATGATTTCTGTTGAAATTGCTGTATTGTTATGT  600

seq1  TAGTCAGCTGCTTTTGAAAATTGCAGCAGATGCTGTACATCAACCAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGCTGCTTTTGAAAATTGCAGCAGATGCTGTACATCAACCAAAAA  650

seq1  GAAAAATGAATGTCATTCCTTATAATGTCTGCATCCCACCCCTCTCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGAATGTCATTCCTTATAATGTCTGCATCCCACCCCTCTCTTCA  700

seq1  GTGAAGATTCTGTAGTCAGTGAAGCAGTCTTACTTCTATTGAGAATCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATTCTGTAGTCAGTGAAGCAGTCTTACTTCTATTGAGAATCTAG  750

seq1  AAGCAGCCTTGCCATTTTCAACAATAAAAGTAAAAGAATCAAACCACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCTTGCCATTTTCAACAATAAAAGTAAAAGAATCAAACCACAGC  800

seq1  AAACTATGAAAACAAAACAAAACAACAACAACAAAATACTCACTAAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGAAAACAAAACAAAACAACAACAACAAAATACTCACTAAGTGT  850

seq1  ATGAGTCTCTCAAGGTTTGAAGAGCATGCTTTTAAAGTAAAAGTCTGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTCTCAAGGTTTGAAGAGCATGCTTTTAAAGTAAAAGTCTGCAG  900

seq1  GATGTTAATGAATTC  915
      |||||||||||||||
seq2  GATGTTAATGAATTC  915


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