BAC Information

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BAC

Clone NameB6Ng01-261O20
Chromosome14 (Build37)
Map Location 12,014,422 - 12,015,565
singlet/doubletsinglet
Overlap genenone
Upstream geneFhit, LOC100041974, LOC667030
Downstream geneEG382843, LOC100042427, LOC667059, LOC100041996, Ptprg, LOC100042441
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261O20.bB6Ng01-261O20.g
ACCGA066477GA066478
length4941,137
definitionB6Ng01-261O20.b B6Ng01-261O20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgttcagctctgagccccattttttaatggggttatttgattttctgg
agtccaccttcctgagttctctatatatattggatattagtcccctatcc
gatttgggataggtaaagatcctttcccaagatggaccatctagtgattg
ccatatgcagggatccatcccataatcagcttccaaatgctgacaccatt
gcatacactagcaagattttactgaaaggacccagatatagctctctctt
atgagactatgctggggcctagcaaacacagaagtggatgatcacagtca
gctattggatgggtcacacggcccccaatggaggagctagagaaattacc
caaggagctaaagggaactgcaaccctataggtggaacaacaatatgaac
taaccagtaccccggagctcttgattctagctgcatatgtatcaaaagat
ggcctagttggccatcactgcaaagagaggcccattggacttgc

gaattcatttctttgtatgttctgaaattcttctaggctcttgcttttcc
tcatgattatgctttcaggagcagggctggaggtatatgggaggaaagct
gaacaaagggaaactgatctgaccctcagctgagactcacagaggaagga
ctgagccaagtggagtctctatggtcaaaatctctatatatcaaaaagta
cacagttataatcagagtgaaaaagtgaatacctgggaaagtctggaaag
tgaaaaatagccatgctcaaatagaaaagtccaatggcacgagtctggaa
aatactgaagttagttttatttgtttgtttgctctgattttgagctatag
tcttgctgtattatctaggctatattctcctgctctcagctctccagtct
cagcatccagagagctgggagtacgcttacctgagagaagtgttgtggtt
tcaaacccggttcttttcaaattgacttaaatgtgacatgtagagagaca
gagaatgagcaaaagtggtttgaagtgaaaaatgtatgcaatttttaatc
tataaggacatggatattataaacaaaatgatgttaagaggcagatggag
caaagatatgaataatgaaaatggagacaccaacttctgctggggctgac
tccagcatattggcttttcctgcaatgctttcctctgcatgcaagagaag
cttgcctaggactttgtgggtctgttagcagagatttagtgcataaaggt
gtccagtgggaggtaagatctatttttgtggtggtaaagcattattgttg
gcatgcccctaattgtgtttgcagtaaaattgaaaggccattacaagagt
gggaaatcagctgaacgatcataaataattggtcaaatgagaggctgtgc
agcccagtcggcaacatcatttttgtggtcattggtacttagggagtgcc
tactgggtacctagcatgaaggaagcaaaggctggtgactgtgagagcat
ttacgcctgattcctcaggttgtatgtgctgctccgatactggttccttt
gtgttcactactatgcagaaaataaccttcagactacaggtccaactctg
caatcttgtcttttctctaggctatctgaagccaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12014422_12015565
seq2: B6Ng01-261O20.g_68_1204 (reverse)

seq1  GATTGGCTTTTCAGATAG-CTAGGGAGAAAAGAC-AGA-TGCAGAGGTGG  47
      |||||||  ||||||||| |||  |||||||||| ||| ||||||| |||
seq2  GATTGGC--TTCAGATAGCCTA--GAGAAAAGACAAGATTGCAGAGTTGG  46

seq1  ACCTGTAGTCTTGAAGGTTA-TTTCTGCAATAGTAGTGAACACAAAGGAA  96
      |||||||||| ||||||||| ||||||| |||||||||||||||||||||
seq2  ACCTGTAGTC-TGAAGGTTATTTTCTGC-ATAGTAGTGAACACAAAGGAA  94

seq1  CCAGGTATTCGGGAGCCAAGCACAATACAACCCTGAGGAAATCAGGCCTT  146
      ||| ||||   |||||  ||||| |||||| ||||||| |||||||| | 
seq2  CCA-GTAT--CGGAGC--AGCAC-ATACAA-CCTGAGG-AATCAGGCGTA  136

seq1  AATGCTCTCACAGTCA-CAGCCTTTGCTTCCTTCATGCTAGGTACCCAGT  195
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATGCTCTCACAGTCACCAGCCTTTGCTTCCTTCATGCTAGGTACCCAGT  186

seq1  AGGCACTCCCTAAGTACCAATGACCACAAAAATGATGTTGCCGACTGGGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTCCCTAAGTACCAATGACCACAAAAATGATGTTGCCGACTGGGC  236

seq1  TGCACAGCCTCTCATTTGACCAATTATTTATGATCGTTCAGCTGATTTCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGCCTCTCATTTGACCAATTATTTATGATCGTTCAGCTGATTTCC  286

seq1  CACTCTTGTAATGGCC-TTCAATTTTACTGCAAACACAATTA-GGGCATG  343
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  CACTCTTGTAATGGCCTTTCAATTTTACTGCAAACACAATTAGGGGCATG  336

seq1  CCAACAATAATGCTTTACCACCACAAAAATAGATCTTACCTCCCACTGGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAATAATGCTTTACCACCACAAAAATAGATCTTACCTCCCACTGGA  386

seq1  CACCTTTATGCACTAAATCTCTGCTAACAGACCCACAAAGTCCTAGGCAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTATGCACTAAATCTCTGCTAACAGACCCACAAAGTCCTAGGCAA  436

seq1  GCTTCTCTTGCATGCAGAGGAAAGCATTGCAGGAAAAGCCAATATGCTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTTGCATGCAGAGGAAAGCATTGCAGGAAAAGCCAATATGCTGG  486

seq1  AGTCAGCCCCAGCAGAAGTTGGTGTCTCCATTTTCATTATTCATATCTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCCCAGCAGAAGTTGGTGTCTCCATTTTCATTATTCATATCTTT  536

seq1  GCTCCATCTGCCTCTTAACATCATTTTGTTTATAATATCCATGTCCTTAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATCTGCCTCTTAACATCATTTTGTTTATAATATCCATGTCCTTAT  586

seq1  AGATTAAAAATTGCATACATTTTTCACTTCAAACCACTTTTGCTCATTCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAATTGCATACATTTTTCACTTCAAACCACTTTTGCTCATTCT  636

seq1  CTGTCTCTCTACATGTCACATTTAAGTCAATTTGAAAAGAACCGGGTTTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTACATGTCACATTTAAGTCAATTTGAAAAGAACCGGGTTTG  686

seq1  AAACCACAACACTTCTCTCAGGTAAGCGTACTCCCAGCTCTCTGGATGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAACACTTCTCTCAGGTAAGCGTACTCCCAGCTCTCTGGATGCT  736

seq1  GAGACTGGAGAGCTGAGAGCAGGAGAATATAGCCTAGATAATACAGCAAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGAGAGCTGAGAGCAGGAGAATATAGCCTAGATAATACAGCAAG  786

seq1  ACTATAGCTCAAAATCAGAGCAAACAAACAAATAAAACTAACTTCAGTAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGCTCAAAATCAGAGCAAACAAACAAATAAAACTAACTTCAGTAT  836

seq1  TTTCCAGACTCGTGCCATTGGACTTTTCTATTTGAGCATGGCTATTTTTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGACTCGTGCCATTGGACTTTTCTATTTGAGCATGGCTATTTTTC  886

seq1  ACTTTCCAGACTTTCCCAGGTATTCACTTTTTCACTCTGATTATAACTGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAGACTTTCCCAGGTATTCACTTTTTCACTCTGATTATAACTGT  936

seq1  GTACTTTTTGATATATAGAGATTTTGACCATAGAGACTCCACTTGGCTCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTTGATATATAGAGATTTTGACCATAGAGACTCCACTTGGCTCA  986

seq1  GTCCTTCCTCTGTGAGTCTCAGCTGAGGGTCAGATCAGTTTCCCTTTGTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTCTGTGAGTCTCAGCTGAGGGTCAGATCAGTTTCCCTTTGTT  1036

seq1  CAGCTTTCCTCCCATATACCTCCAGCCCTGCTCCTGAAAGCATAATCATG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCCTCCCATATACCTCCAGCCCTGCTCCTGAAAGCATAATCATG  1086

seq1  AGGAAAAGCAAGAGCCTAGAAGAATTTCAGAACATACAAAGAAATGAATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGCAAGAGCCTAGAAGAATTTCAGAACATACAAAGAAATGAATT  1136

seq1  C  1144
      |
seq2  C  1137


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