BAC Information

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BAC

Clone NameB6Ng01-262E19
Chromosome14 (Build37)
Map Location 17,078,324 - 17,078,861
singlet/doubletsinglet
Overlap geneOxsm
Upstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209, EG435389
Downstream geneNgly1, Top2b, Rarb, Tpi-rs9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262E19.bB6Ng01-262E19.g
ACCGA066753GA066754
length7761,211
definitionB6Ng01-262E19.b B6Ng01-262E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcatgaagatactgagagaataagagtcatgataggccatt
ttgtagagctgtgaaagggaagcttgggttccagtggagaccacaagatg
ttggagatatcaacgctatgagaaagctgccaaggaggtcaatagagaag
gaccagcctaagagagagatgcaggctactggcaggaaagctggaggtgt
ggagcccttaacagaagacacgaagctacaggatttggtgttttgtcctg
ctggattctagtcatagtttggtccattatgttcttattccccacttgga
ccttttgggatggcaatctgtgccatatattggaaatatgtgatttgcct
ttttattttactgaaggttgaattctgtgatgctttgcatcttagaagag
actttgggcttttaaacagtattaagactgtgaaagactccagggcatct
atgaagaccggggagtagagtgtggtggtttgaatggaaatatttcctac
aggctctagtatttgaactcatggtttccagtcagtagttcagtttggga
atagttaggtggcacatcttgctggaagaagtatgtcactgaaagtagta
gagaaaacacctttgtttgctctcttggcttcatgcttgtggtaaaggat
gtgaactttccatttcttcctatagccaccatgcttgctgtctgctgata
tgctgtcgccataaccttctggaaatatccctttgcctctgagccatttc
tcccacacctcatttttatttgtgtg

gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaattgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggtttgggatcttcct
gagaagcaagcaataaagctcttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataagtggcgccgaagaacccggg
aactgtcatcacaccggtgcaaggaagatccctcgttcgaggggcagaat
cagaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaattt
ctccagagttagaagcccttttgattgtttgcacggcgattacacttttc
ctttcggtttcattttatttccaccactggaactgctgactggttcttag
tcgcggtcaggcctggacagcggcagtatgggaatctcccattctatagt
agtggccttaagctcggtcctgaagcagtgtggcctaaaaatcgacacta
agaccttagagggatttgtcagagagatagaccatgtcgcactatggtat
gcttgctcagggtcattaactgtcgcctcttgggacaaactgaaaggaga
tctagttagggaacagcagaacggcaaacttaaagcagggattatgccgc
tatggaaattggtgaaatcgtgtttaacagatgaggattgtcagcaaatg
atagaagcggggcagaaagttctggacgaaattcaagaaagtctatcaga
gatagagcggggagagaaagtaaaagtagagaggaaacaaagtgcactga
aaaatttaggcctttccatgggccttgagctcgaggaaaagagatataag
ggaaagaatgcctttgggagagataagaaaaagagatggaaagggagaag
aagaagggagatcgagctggagaggcacataaggaaagagcctctacccg
tcactggttgaattagcagctagcctctagtagctcagaacagatgatga
gttagcgcctctgaagaaacagactcgggaggaggaaggagttcgttata
gggagaatgtaccagccagaataaaaatgtaggcctactcagtccagaaa
tgccataagccgctggaaaaagccaagacctggtgtggcttcgggccttc
cggaacactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_17078324_17078861
seq2: B6Ng01-262E19.b_284_821 (reverse)

seq1  CACACAAATAAAAATGAGGTGTGGGAGAAATGGCTCAGAGGCAAAGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATAAAAATGAGGTGTGGGAGAAATGGCTCAGAGGCAAAGGGAT  50

seq1  ATTTCCAGAAGGTTATGGCGACAGCATATCAGCAGACAGCAAGCATGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGAAGGTTATGGCGACAGCATATCAGCAGACAGCAAGCATGGTG  100

seq1  GCTATAGGAAGAAATGGAAAGTTCACATCCTTTACCACAAGCATGAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGGAAGAAATGGAAAGTTCACATCCTTTACCACAAGCATGAAGCC  150

seq1  AAGAGAGCAAACAAAGGTGTTTTCTCTACTACTTTCAGTGACATACTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCAAACAAAGGTGTTTTCTCTACTACTTTCAGTGACATACTTCT  200

seq1  TCCAGCAAGATGTGCCACCTAACTATTCCCAAACTGAACTACTGACTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAAGATGTGCCACCTAACTATTCCCAAACTGAACTACTGACTGGA  250

seq1  AACCATGAGTTCAAATACTAGAGCCTGTAGGAAATATTTCCATTCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAGTTCAAATACTAGAGCCTGTAGGAAATATTTCCATTCAAACC  300

seq1  ACCACACTCTACTCCCCGGTCTTCATAGATGCCCTGGAGTCTTTCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTCTACTCCCCGGTCTTCATAGATGCCCTGGAGTCTTTCACAGT  350

seq1  CTTAATACTGTTTAAAAGCCCAAAGTCTCTTCTAAGATGCAAAGCATCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACTGTTTAAAAGCCCAAAGTCTCTTCTAAGATGCAAAGCATCAC  400

seq1  AGAATTCAACCTTCAGTAAAATAAAAAGGCAAATCACATATTTCCAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAACCTTCAGTAAAATAAAAAGGCAAATCACATATTTCCAATAT  450

seq1  ATGGCACAGATTGCCATCCCAAAAGGTCCAAGTGGGGAATAAGAACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACAGATTGCCATCCCAAAAGGTCCAAGTGGGGAATAAGAACATAA  500

seq1  TGGACCAAACTATGACTAGAATCCAGCAGGACAAAACA  538
      ||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAAACTATGACTAGAATCCAGCAGGACAAAACA  538


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