BAC Information

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BAC

Clone NameB6Ng01-262I22
Chromosome14 (Build37)
Map Location 47,893,228 - 48,019,731
singlet/doubletdoublet
Overlap geneWdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7
Upstream geneLOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1
Downstream geneLOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262I22.bB6Ng01-262I22.g
ACCGA066942GA066943
length1,124151
definitionB6Ng01-262I22.b B6Ng01-262I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,018,615 - 48,019,731)(47,893,228 - 47,893,378)
sequence
gaattcaggacctctgctcgctccggtcaatcccgcttgctctggcccaa
agatttatttattattataaataagtacactgtagctgtcttcagacacc
ccagaagagggagtcagatctcattacagatggttgtgagtcaccatgtg
gttgctgggatttgaactcaggacctccggaagagcagtcagtgttttta
cttgctgagccatcttgtcaccctcttgtgctcagtatttatgattaagt
tttttttgggtagtcatttttgttttgctgtaagaatttgattctgcgag
ctcgagggtattagaggttaagactcagttgtctggcttgctataaaggc
ccgttttcatttcttaacttctttagctaaaggtcttatccgtacaacgg
ttggtcaaacaagactccttatcaaggagagattcagacagtttgaagga
ctggtggacaactgcgagtataaacggggtgaaaaggagacgacctgcac
agatctggatggattctgggatatggttagttttcaggtatgtgtcaggt
gtgctgcccacatctgcttctgacatcggtaaatgggatgacagtagttc
agctacttatggtgtaaggggtgagctctcaggacaccccatgtcagctt
cactgccttctcccctatgctgtcagagtctgtgataatggtgtgtgtga
ggagtgagccagtgaagttaggaattcctgtcctatgctgggcattgtag
ttagagatgactgaaaggcagagtcaagcagggcgtggtggcacacatgg
tgccaaatcccagcttgaggccagcctggtctacacttgcagacagccag
ggccacacagaggaacatagaatctgactccgtcttacagcatccatact
caagtgggcacgcagtcacacacatataacatatacacgtaagaataaaa
tcagtctgggaaggaggaaaacaagagcaagcagttcagttgtgtgtggc
agcatacatcttttagtccccctccacctcgggaaacttagtctatagga
gtttgcaattcagaattcagaattataacaatattcagtggctttctact
gtaagagaaagaattacataggtt
atttttttcttataaggaggattaagagattctgcaggagctggggctgg
tggtgcacgtctttaaacccagcactcaggaggctacacagagaaaccgt
atttcaaaaacaaaataaaacaaatgtaaggggcgggggagggaggggag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_48018615_48019731
seq2: B6Ng01-262I22.b_50_1173 (reverse)

seq1  AACCTATGTATATCCTTCTC-TACAGTAGAAAGCACCTGAATATTGTTAA  49
      ||||||||||  || ||||| |||||||||||||  |||||||||||| |
seq2  AACCTATGTAATTCTTTCTCTTACAGTAGAAAGCCACTGAATATTGTT-A  49

seq1  TAATTCTGAATTCTGAA-TGC-AACTTCTATAGACTTAGTTTCCCGGGGT  97
      ||||||||||||||||| ||| |||| ||||||||| ||||||||| |||
seq2  TAATTCTGAATTCTGAATTGCAAACTCCTATAGACTAAGTTTCCCGAGGT  99

seq1  G--AGGGGACT-AAAGGTGTATGCTGCCACACACAACTG-ACTGCTTGCT  143
      |   ||||||| |||| |||||||||||||||||||||| ||||||||||
seq2  GGAGGGGGACTAAAAGATGTATGCTGCCACACACAACTGAACTGCTTGCT  149

seq1  C-TGTTTTCCTTCCTTCCAGACTGATTTTA-TCTTACGTGTATATGTTAT  191
      | ||||||||| | | |||||||||||||| |||||||||||||||||||
seq2  CTTGTTTTCCTCCTTCCCAGACTGATTTTATTCTTACGTGTATATGTTAT  199

seq1  ATGTGTGTGACTGCGTGGCCCACTTGAGTATGGATGCTGTAAGACGGAGT  241
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGACTGCGT-GCCCACTTGAGTATGGATGCTGTAAGACGGAGT  248

seq1  CAGATTCTATGTTCCTCTGTGTGGCCCTGGCTGTCTGCAAGTGTAGACCA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCTATGTTCCTCTGTGTGGCCCTGGCTGTCTGCAAGTGTAGACCA  298

seq1  GGCTGGCCTCAAGCTGGGATTTGGCACCATGTGTGCCACCACGCCCTGCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCAAGCTGGGATTTGGCACCATGTGTGCCACCACGCCCTGCT  348

seq1  TGACTCTGCCTTTCAGTCATCTCTAACTACAATGCCCAGCATAGGACAGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGCCTTTCAGTCATCTCTAACTACAATGCCCAGCATAGGACAGG  398

seq1  AATTCCTAACTTCACTGGCTCACTCCTCACACACACCATTATCACAGACT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAACTTCACTGGCTCACTCCTCACACACACCATTATCACAGACT  448

seq1  CTGACAGCATAGGGGAGAAGGCAGTGAAGCTGACATGGGGTGTCCTGAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCATAGGGGAGAAGGCAGTGAAGCTGACATGGGGTGTCCTGAGA  498

seq1  GCTCACCCCTTACACCATAAGTAGCTGAACTACTGTCATCCCATTTACCG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCCCTTACACCATAAGTAGCTGAACTACTGTCATCCCATTTACCG  548

seq1  ATGTCAGAAGCAGATGTGGGCAGCACACCTGACACATACCTGAAAACTAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGAAGCAGATGTGGGCAGCACACCTGACACATACCTGAAAACTAA  598

seq1  CCATATCCCAGAATCCATCCAGATCTGTGCAGGTCGTCTCCTTTTCACCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCCAGAATCCATCCAGATCTGTGCAGGTCGTCTCCTTTTCACCC  648

seq1  CGTTTATACTCGCAGTTGTCCACCAGTCCTTCAAACTGTCTGAATCTCTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTATACTCGCAGTTGTCCACCAGTCCTTCAAACTGTCTGAATCTCTC  698

seq1  CTTGATAAGGAGTCTTGTTTGACCAACCGTTGTACGGATAAGACCTTTAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAAGGAGTCTTGTTTGACCAACCGTTGTACGGATAAGACCTTTAG  748

seq1  CTAAAGAAGTTAAGAAATGAAAACGGGCCTTTATAGCAAGCCAGACAACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAGTTAAGAAATGAAAACGGGCCTTTATAGCAAGCCAGACAACT  798

seq1  GAGTCTTAACCTCTAATACCCTCGAGCTCGCAGAATCAAATTCTTACAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTAACCTCTAATACCCTCGAGCTCGCAGAATCAAATTCTTACAGC  848

seq1  AAAACAAAAATGACTACCCAAAAAAAACTTAATCATAAATACTGAGCACA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAATGACTACCCAAAAAAAACTTAATCATAAATACTGAGCACA  898

seq1  AGAGGGTGACAAGATGGCTCAGCAAGTAAAAACACTGACTGCTCTTCCGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGACAAGATGGCTCAGCAAGTAAAAACACTGACTGCTCTTCCGG  948

seq1  AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACCATCTG  998

seq1  TAATGAGATCTGACTCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGATCTGACTCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGT  1048

seq1  ACTTATTTATAATAATAAATAAATCTTTGGGCCAGAGCAAGCGGGATTGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTATAATAATAAATAAATCTTTGGGCCAGAGCAAGCGGGATTGA  1098

seq1  CCGGAGCGAGCAGAGGTCCTGAATTC  1117
      ||||||||||||||||||||||||||
seq2  CCGGAGCGAGCAGAGGTCCTGAATTC  1124

seq1: chr14_47893228_47893378
seq2: B6Ng01-262I22.g_71_221

seq1  ATTTTTTTCTTATAAGGAGGATTAAGAGATTCTGCAGGAGCTGGGGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTTATAAGGAGGATTAAGAGATTCTGCAGGAGCTGGGGCTGG  50

seq1  TGGTGCACGTCTTTAAACCCAGCACTCAGGAGGCTACACAGAGAAACCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACGTCTTTAAACCCAGCACTCAGGAGGCTACACAGAGAAACCGT  100

seq1  ATTTCAAAAACAAAATAAAACAAATGTAAGGGGCGGGGGAGGGAGGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAACAAAATAAAACAAATGTAAGGGGCGGGGGAGGGAGGGGAG  150

seq1  G  151
      |
seq2  G  151