BAC Information

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BAC

Clone NameB6Ng01-262N23
Chromosome14 (Build37)
Map Location 52,592,659 - 52,720,550
singlet/doubletdoublet
Overlap geneE130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc
Upstream geneLOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13
Downstream geneRpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262N23.bB6Ng01-262N23.g
ACCGA067178GA067179
length3851,112
definitionB6Ng01-262N23.b B6Ng01-262N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,592,659 - 52,593,049)(52,719,452 - 52,720,550)
sequence
atttaaaaatatgtaaagtgtggttattttagatgcgtttttaaaattta
tttattttatgtatatgagtacaccattgttttcttcagacacacccaaa
gagggcatcggatcccattacagatagttgtgagccaacatgtggatgct
gagaattgaactcaggacctctggaagagcagtcagtgctcttaaccact
aagccagctctccagccctagatatgtttctttcatctgtaatctttact
ccaataggacaaactatattcttaatttcttaattttaggcatagcaatc
tatattacaagtaactgttatggcagatacaaagaatattaagaaagaaa
gagagagagagagagagagagagagagagagagag
gaattctcatttatcacgactcattgttgaaagtggttgactacacaaaa
agtcccacctcatccccacctgtttcctgctcttactggtgaagtgtacc
ctagtaagggagtgtacttccttgggaggcaggggcagatgggcagacgg
gcaggcagatgtctgagttggaggctagcatggtctaaatagctagttat
aggtcagccagtgttaacagatgagatctcatcttaaaaggaaaaaaaaa
acctagtcattgctattgacttccttaaaaacagtattactataagcggt
caagtaaatttgttggtatttgttcttagcattatttacttacacttcat
acactcaactttcattggaagggttatggttttgtatgaactaaatatac
tgaagaattgactggtgaaaatctttttggtgtttattactgtttttgaa
aagctacattgagtattggttcccactatcagtttaaaaaacgacggctg
ggctctggactaccagtttcagttgagtcatatggttctctagattttac
atttttaataagtaccaggtgatttttcttgtcttgactcatttttgagt
gtccttttagaagagctcatccaaacaaaccttaatgagagttttgagaa
tatagcccagaaatacttaaattctaatttttctgtgtatggctgcatgt
atgtatgtacatatgtatgtatgtgcactgtgtgcttgtctgctggacat
gtaagacataaagaaaacctaggactccctggaactagaattaggtgtga
gctagcatctgggtgctggaattagaacctctgagagcagtgctcttacc
tgctgaaccattctttccaactcctatatatatgttctttatgtagggaa
gacattttgctttttaaaaagtagcagtaagctcattagttgaataacat
aggtgagattactggtggacataaaaacacgttaatgtcttttacattgc
tgcgttttgttttttggcttttttcaagaacagggtttcaatacagcttg
gatgcttctgactgatcttgggaattcacttatagttaggagcaggctgg
gtcttccaaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52592659_52593049
seq2: B6Ng01-262N23.b_48_438

seq1  GAATTCATTTAAAAATATGTAAAGTGTGGTTATTTTAGATGCGTTTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAAAATATGTAAAGTGTGGTTATTTTAGATGCGTTTTTAA  50

seq1  AATTTATTTATTTTATGTATATGAGTACACCATTGTTTTCTTCAGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTATTTTATGTATATGAGTACACCATTGTTTTCTTCAGACACA  100

seq1  CCCAAAGAGGGCATCGGATCCCATTACAGATAGTTGTGAGCCAACATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGAGGGCATCGGATCCCATTACAGATAGTTGTGAGCCAACATGTG  150

seq1  GATGCTGAGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGAGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTA  200

seq1  ACCACTAAGCCAGCTCTCCAGCCCTAGATATGTTTCTTTCATCTGTAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAAGCCAGCTCTCCAGCCCTAGATATGTTTCTTTCATCTGTAATC  250

seq1  TTTACTCCAATAGGACAAACTATATTCTTAATTTCTTAATTTTAGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCCAATAGGACAAACTATATTCTTAATTTCTTAATTTTAGGCATA  300

seq1  GCAATCTATATTACAAGTAACTGTTATGGCAGATACAAAGAATATTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTATATTACAAGTAACTGTTATGGCAGATACAAAGAATATTAAGA  350

seq1  AAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  391
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  391

seq1: chr14_52719452_52720550
seq2: B6Ng01-262N23.g_69_1180 (reverse)

seq1  GGGTTGGGAG-GCCAGCCTGCT-CTACAT---AGTGAATT-CCAAGATCA  44
      ||||||| ||  |||||||||| |||  |   |||||||| |||||||||
seq2  GGGTTGGAAGACCCAGCCTGCTCCTAACTATAAGTGAATTCCCAAGATCA  50

seq1  GCCAG-AGCA-CCAAGCTGTA-TGAGACCCTGT--CTGGAAAAAGCCAAA  89
      | ||| |||| |||||||||| ||| |||||||   || |||||||||||
seq2  GTCAGAAGCATCCAAGCTGTATTGAAACCCTGTTCTTGAAAAAAGCCAAA  100

seq1  AACAAAAACGCAGCAATGTAAAAAGCATT-ACGTG-TTTTATGTCAACAA  137
      ||  |||||||||||||||||||  |||| ||||| ||||||||| || |
seq2  AAACAAAACGCAGCAATGTAAAAGACATTAACGTGTTTTTATGTCCACCA  150

seq1  GTAATCTCACCTATGTTATCAAACTAATGAGC-TACTGCTACTTTTTTAA  186
      |||||||||||||||||||  ||||||||||| ||||||||| |||||||
seq2  GTAATCTCACCTATGTTATTCAACTAATGAGCTTACTGCTAC-TTTTTAA  199

seq1  AAAGCAAAATGTCTTTCCCTACATAAAGAACATATATATAGGAGTTGGAA  236
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAATGTC-TTCCCTACATAAAGAACATATATATAGGAGTTGGAA  248

seq1  AG-ATGGTTCAGCAGGTAAGAGCACTGCTCTCAGAGGTTCTAATTCCAGC  285
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTTCAGCAGGTAAGAGCACTGCTCTCAGAGGTTCTAATTCCAGC  298

seq1  ACCCAGATGCTAGCTCACACCTAATTCTAGTTCCAGGGAGTCCTAGGTTT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGATGCTAGCTCACACCTAATTCTAGTTCCAGGGAGTCCTAGGTTT  348

seq1  TCTTTATGTCTTACATGTCCAGCAGACAAGCACACAGTGCACATACATAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGTCTTACATGTCCAGCAGACAAGCACACAGTGCACATACATAC  398

seq1  ATATGTACATACATACATGCAGCCATACACAGAAAAATTAGAATTTAAGT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACATACATACATGCAGCCATACACAGAAAAATTAGAATTTAAGT  448

seq1  ATTTCTGGGCTATATTCTCAAAACTCTCATTAAGGTTTGTTTGGATGAGC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGCTATATTCTCAAAACTCTCATTAAGGTTTGTTTGGATGAGC  498

seq1  TCTTCTAAAAGGACACTCAAAAATGAGTCAAGACAAGAAAAATCACCTGG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAAAGGACACTCAAAAATGAGTCAAGACAAGAAAAATCACCTGG  548

seq1  TACTTATTAAAAATGTAAAATCTAGAGAACCATATGACTCAACTGAAACT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTAAAAATGTAAAATCTAGAGAACCATATGACTCAACTGAAACT  598

seq1  GGTAGTCCAGAGCCCAGCCGTCGTTTTTTAAACTGATAGTGGGAACCAAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCCAGAGCCCAGCCGTCGTTTTTTAAACTGATAGTGGGAACCAAT  648

seq1  ACTCAATGTAGCTTTTCAAAAACAGTAATAAACACCAAAAAGATTTTCAC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATGTAGCTTTTCAAAAACAGTAATAAACACCAAAAAGATTTTCAC  698

seq1  CAGTCAATTCTTCAGTATATTTAGTTCATACAAAACCATAACCCTTCCAA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATTCTTCAGTATATTTAGTTCATACAAAACCATAACCCTTCCAA  748

seq1  TGAAAGTTGAGTGTATGAAGTGTAAGTAAATAATGCTAAGAACAAATACC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTTGAGTGTATGAAGTGTAAGTAAATAATGCTAAGAACAAATACC  798

seq1  AACAAATTTACTTGACCGCTTATAGTAATACTGTTTTTAAGGAAGTCAAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTACTTGACCGCTTATAGTAATACTGTTTTTAAGGAAGTCAAT  848

seq1  AGCAATGACTAGGTTTTTTTTTTCCTTTTAAGATGAGATCTCATCTGTTA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGACTAGGTTTTTTTTTTCCTTTTAAGATGAGATCTCATCTGTTA  898

seq1  ACACTGGCTGACCTATAACTAGCTATTTAGACCATGCTAGCCTCCAACTC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCTGACCTATAACTAGCTATTTAGACCATGCTAGCCTCCAACTC  948

seq1  AGACATCTGCCTGCCCGTCTGCCCATCTGCCCCTGCCTCCCAAGGAAGTA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCTGCCTGCCCGTCTGCCCATCTGCCCCTGCCTCCCAAGGAAGTA  998

seq1  CACTCCCTTACTAGGGTACACTTCACCAGTAAGAGCAGGAAACAGGTGGG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTTACTAGGGTACACTTCACCAGTAAGAGCAGGAAACAGGTGGG  1048

seq1  GATGAGGTGGGACTTTTTGTGTAGTCAACCACTTTCAACAATGAGTCGTG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGTGGGACTTTTTGTGTAGTCAACCACTTTCAACAATGAGTCGTG  1098

seq1  ATAAATGAGAATTC  1099
      ||||||||||||||
seq2  ATAAATGAGAATTC  1112