BAC Information

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BAC

Clone NameB6Ng01-264I05
Chromosome14 (Build37)
Map Location 90,076,172 - 90,201,250
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264I05.bB6Ng01-264I05.g
ACCGA068398GA068399
length1,1391,138
definitionB6Ng01-264I05.b B6Ng01-264I05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,200,106 - 90,201,250)(90,076,172 - 90,077,310)
sequence
gaattcagtgaattcattccatttagttcaggtcagcagtggcaggttaa
gccagaaaataggaaggtgccaaaatactagaacaaatcattggtgttaa
tttgaggccaagtcgaacaattcagtgagaaactgagagaagcctcattg
aaccattcggtttggagaggtgtttgacttagaactgctgagtttaacca
gctagtcaaaattcaataagcatgatcacatcatgctaatcaaagatatt
tttacacatcctgagtgcagccttccctccaagaaacccgctcatcatcc
atacacacacagccctttcccccagatccaatgttcttccatttcccttc
tgagaagagcaggcctcccactgataacaactgaacatggattagcataa
tgcagtaagaatgggtacagcaaagctgtatgatgcaacccagtagaaga
aggttaccaagagcaggcaaaaaagtcatagacattccacttccactgtt
agaagtcaaagaagaatctcaagctaaacaaccacaaaatgtatgcagag
atcctaggagtaacccatgcaaaatatgtgcttcaaactctgtgagatca
tatgagccctgcaggaaaattagtctttgtattttgctatgcatatctta
atgactatagttaaaactatttaacaacattagtaaatacatcttaaagt
gattaattattaagggagtttaaataaatataaaatataatgtatttgca
atattgatttctatgatttaacttttctttgtagaatccttgtgctgatt
aaaatgtaactctgaaactcctctgctaggcacttctgatctctaatgaa
ggagttcactataccagtcatttcatttaaatagaatattgtctttttct
tttagtaacttgtttggcataatgattataaagttgttatagctagtatt
tgtcttcaatccagtatttgcctccaggtttcgctttctctttttgtaca
ctttgctttgtaagttttacatcactaaaatctactgcagttctttggtg
tgactattctcactagcccacaaaaatgttctatgctgtgatttttaata
ctacttttctgaatgctaacttttccactgacaatattt

gaattccatgaaccccctggccatgtgtcctctgtaatattttagttcag
ttaatatattgcaaaacttatgtttaaggaggtttcaatatttactaata
caattcagtgttccaagaatataatatctagtttattctgaattcttcag
aatatactgtttatataaaagtctgaattttttctattttcccataacat
cacattagtatcaaagtcaattgtttactattactaaaggtcagtgagtt
ctattactatgtggtagttgaggtctacaattatttgcttactctttaat
aactaaactttcagatagtttaagtattaatatataaatactaagtttga
aaaaattcgtacatttatttattcaaaataaaaatcgggaaaatttcata
atgtacatatttatttatatgtaggatacaaatgtaatcttcataaagat
ggtatttttcttcttgatttgggttttgtattgagtttgaggaatggtct
tggactgccccttaacttactgagtactgtaattgtctaggcagttagtc
ccaggagccactggtctttgaatcttcagactgggatgacacggttaacc
ttgatacttggatttttttttcacatgggaatatgtttagggatcaaact
atgtgttcattcttgtatgacaaccactttaccaatagtgttctcctaac
caatgaatcttcttttagtgaaataatcaaaagcctctaaaagatactga
aaagagacttgggtaatctagactgagaatttcaattaaacaattctaca
gaatggatatttggaaaataaaaagcacttagaattagatcaagttggta
ttttctattcctctaacttccctttgttattaaagaggagacataaatat
ttttatgaaatcatttaatgttttaaaaggtgataaatattttacaaata
caaataaaccatagaaaattaattatgcatatattataaacttaacagca
ttatttagtatgtctctgccttcgatatttacaactttgaattataaaaa
gaatcagctagcttaaaagagtaacaatagattaagtagataagtattat
atttaatcattttggttccacagctctactgtcctcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90200106_90201250
seq2: B6Ng01-264I05.b_45_1183 (reverse)

seq1  AAATATTGTTCAGTGGGAAAAGTGTAGCA-TCAGGAAAAAGTAGTATAAA  49
      |||||||| ||||| |||||||| ||||| ||||  ||||||||||| ||
seq2  AAATATTG-TCAGT-GGAAAAGT-TAGCATTCAG--AAAAGTAGTATTAA  45

seq1  AATTCACAGCATAGAACATTTTTGTGGGCTAGTGAGAATTAGTCAACACC  99
      || ||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  AAATCACAGCATAGAACATTTTTGTGGGCTAGTGAGAA-TAGTC-ACACC  93

seq1  AAAGAACCTGCAGTAGATTTTAGTGATGTAAAACTTACAAAGCAAAGTGT  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAA-CTGCAGTAGATTTTAGTGATGTAAAACTTACAAAGCAAAGTGT  142

seq1  AC-AAAAGAGAAAGCGAAACCCTGGA-GCAAATACTGGATTGAAGACAAA  197
      || |||||||||||||||| |||||| |||||||||||||||||||||||
seq2  ACAAAAAGAGAAAGCGAAA-CCTGGAGGCAAATACTGGATTGAAGACAAA  191

seq1  TACTAGCTATAACAACTTTATAATCATTATGCCAAACAAGTTACTAAAAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCTATAACAACTTTATAATCATTATGCCAAACAAGTTACTAAAAG  241

seq1  AAAAAGACAATATTCTATTTAAATGAAATGACTGGTATAGTGAACTCCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAATATTCTATTTAAATGAAATGACTGGTATAGTGAACTCCTT  291

seq1  CATTAGAGATCAGAAGTGCCTAGCAGAGGAGTTTCAGAGTTACATTTTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAGATCAGAAGTGCCTAGCAGAGGAGTTTCAGAGTTACATTTTAA  341

seq1  TCAGCACAAGGATTCTACAAAGAAAAGTTAAATCATAGAAATCAATATTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACAAGGATTCTACAAAGAAAAGTTAAATCATAGAAATCAATATTG  391

seq1  CAAATACATTATATTTTATATTTATTTAAACTCCCTTAATAATTAATCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACATTATATTTTATATTTATTTAAACTCCCTTAATAATTAATCAC  441

seq1  TTTAAGATGTATTTACTAATGTTGTTAAATAGTTTTAACTATAGTCATTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATGTATTTACTAATGTTGTTAAATAGTTTTAACTATAGTCATTA  491

seq1  AGATATGCATAGCAAAATACAAAGACTAATTTTCCTGCAGGGCTCATATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGCATAGCAAAATACAAAGACTAATTTTCCTGCAGGGCTCATATG  541

seq1  ATCTCACAGAGTTTGAAGCACATATTTTGCATGGGTTACTCCTAGGATCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAGAGTTTGAAGCACATATTTTGCATGGGTTACTCCTAGGATCT  591

seq1  CTGCATACATTTTGTGGTTGTTTAGCTTGAGATTCTTCTTTGACTTCTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACATTTTGTGGTTGTTTAGCTTGAGATTCTTCTTTGACTTCTAA  641

seq1  CAGTGGAAGTGGAATGTCTATGACTTTTTTGCCTGCTCTTGGTAACCTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGTGGAATGTCTATGACTTTTTTGCCTGCTCTTGGTAACCTTC  691

seq1  TTCTACTGGGTTGCATCATACAGCTTTGCTGTACCCATTCTTACTGCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGGGTTGCATCATACAGCTTTGCTGTACCCATTCTTACTGCATT  741

seq1  ATGCTAATCCATGTTCAGTTGTTATCAGTGGGAGGCCTGCTCTTCTCAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATCCATGTTCAGTTGTTATCAGTGGGAGGCCTGCTCTTCTCAGA  791

seq1  AGGGAAATGGAAGAACATTGGATCTGGGGGAAAGGGCTGTGTGTGTATGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATGGAAGAACATTGGATCTGGGGGAAAGGGCTGTGTGTGTATGG  841

seq1  ATGATGAGCGGGTTTCTTGGAGGGAAGGCTGCACTCAGGATGTGTAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGCGGGTTTCTTGGAGGGAAGGCTGCACTCAGGATGTGTAAAAA  891

seq1  TATCTTTGATTAGCATGATGTGATCATGCTTATTGAATTTTGACTAGCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGATTAGCATGATGTGATCATGCTTATTGAATTTTGACTAGCTG  941

seq1  GTTAAACTCAGCAGTTCTAAGTCAAACACCTCTCCAAACCGAATGGTTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACTCAGCAGTTCTAAGTCAAACACCTCTCCAAACCGAATGGTTCA  991

seq1  ATGAGGCTTCTCTCAGTTTCTCACTGAATTGTTCGACTTGGCCTCAAATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTTCTCTCAGTTTCTCACTGAATTGTTCGACTTGGCCTCAAATT  1041

seq1  AACACCAATGATTTGTTCTAGTATTTTGGCACCTTCCTATTTTCTGGCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAATGATTTGTTCTAGTATTTTGGCACCTTCCTATTTTCTGGCTT  1091

seq1  AACCTGCCACTGCTGACCTGAACTAAATGGAATGAATTCACTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCACTGCTGACCTGAACTAAATGGAATGAATTCACTGAATTC  1139


seq1: chr14_90076172_90077310
seq2: B6Ng01-264I05.g_66_1203

seq1  GAATTCCATGAACCCCCTGGCCATGTGTCCTCTGTAATATTTTAGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAACCCCCTGGCCATGTGTCCTCTGTAATATTTTAGTTCAG  50

seq1  TTAATATATTGCAAAACTTATGTTTAAGGAGGTTTCAATATTTACTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATATTGCAAAACTTATGTTTAAGGAGGTTTCAATATTTACTAATA  100

seq1  CAATTCAGTGTTCCAAGAATATAATATCTAGTTTATTCTGAATTCTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAGTGTTCCAAGAATATAATATCTAGTTTATTCTGAATTCTTCAG  150

seq1  AATATACTGTTTATATAAAAGTCTGAATTTTTTCTATTTTCCCATAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGTTTATATAAAAGTCTGAATTTTTTCTATTTTCCCATAACAT  200

seq1  CACATTAGTATCAAAGTCAATTGTTTACTATTACTAAAGGTCAGTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGTATCAAAGTCAATTGTTTACTATTACTAAAGGTCAGTGAGTT  250

seq1  CTATTACTATGTGGTAGTTGAGGTCTACAATTATTTGCTTACTCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTATGTGGTAGTTGAGGTCTACAATTATTTGCTTACTCTTTAAT  300

seq1  AACTAAACTTTCAGATAGTTTAAGTATTAATATATAAATACTAAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACTTTCAGATAGTTTAAGTATTAATATATAAATACTAAGTTTGA  350

seq1  AAAAATTCGTACATTTATTTATTCAAAATAAAAATCGGGAAAATTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCGTACATTTATTTATTCAAAATAAAAATCGGGAAAATTTCATA  400

seq1  ATGTACATATTTATTTATATGTAGGATACAAATGTAATCTTCATAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATATTTATTTATATGTAGGATACAAATGTAATCTTCATAAAGAT  450

seq1  GGTATTTTTCTTCTTGATTTGGGTTTTGTATTGAGTTTGAGGAATGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTTCTTCTTGATTTGGGTTTTGTATTGAGTTTGAGGAATGGTCT  500

seq1  TGGACTGCCCCTTAACTTACTGAGTACTGTAATTGTCTAGGCAGTTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCCCCTTAACTTACTGAGTACTGTAATTGTCTAGGCAGTTAGTC  550

seq1  CCAGGAGCCACTGGTCTTTGAATCTTCAGACTGGGATGACACGGTTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCCACTGGTCTTTGAATCTTCAGACTGGGATGACACGGTTAACC  600

seq1  TTGATACTTGGATTTTTTTTTCACATGGGAATATGTTTAGGGATCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTTGGATTTTTTTTTCACATGGGAATATGTTTAGGGATCAAACT  650

seq1  ATGTGTTCATTCTTGTATGACAACCACTTTACCAATAGTGTTCTCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCATTCTTGTATGACAACCACTTTACCAATAGTGTTCTCCTAAC  700

seq1  CAATGAATCTTCTTTTAGTGAAATAATCAAAAGCCTCTAAAAGATACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATCTTCTTTTAGTGAAATAATCAAAAGCCTCTAAAAGATACTGA  750

seq1  AAAGAGACTTGGGTAATCTAGACTGAGAATTTCAATTAAACAATTCTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACTTGGGTAATCTAGACTGAGAATTTCAATTAAACAATTCTACA  800

seq1  GAATGGATATTTGGAAAATAAAAAGCACTTAGAATTAGATCAAGTTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATATTTGGAAAATAAAAAGCACTTAGAATTAGATCAAGTTGGTA  850

seq1  TTTTCTATTCCTCTAACTTCCCTTTGTTATTAAAGAGGAGACATAAATA-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTCTATTCCTCTAACTTCCCTTTGTTATTAAAGAGGAGACATAAATAT  900

seq1  TTTTATGAAATCATTTAATGTTTTAAAAGGTGATAAATATTTTACAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAAATCATTTAATGTTTTAAAAGGTGATAAATATTTTACAAATA  950

seq1  CAAATAAACCATAGAAAAATTAATTATGCATATTATTATAAAACTTAACA  999
      |||||||||||||| ||||||||||||||||| |||||| ||||||||||
seq2  CAAATAAACCATAG-AAAATTAATTATGCATA-TATTAT-AAACTTAACA  997

seq1  GCA-TATTTAGTATGTCTCTGCCTTCGATATTTACAACTTTGAA-TATAA  1047
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATTATTTAGTATGTCTCTGCCTTCGATATTTACAACTTTGAATTATAA  1047

seq1  AAAGAAATCAGCTAGCTT-AGAGAGTAAACCAATAGATTTAGTAGAATAA  1096
      |||| ||||||||||||| | |||||||  ||||||||| ||||| ||||
seq2  AAAG-AATCAGCTAGCTTAAAAGAGTAA--CAATAGATTAAGTAG-ATAA  1093

seq1  ATA-TATA-TTAATCATTTTGG-TCCACAGCTCTACCTGTCCTCCT  1139
       || |||| ||||||||||||| |||||||||||| ||||||||||
seq2  GTATTATATTTAATCATTTTGGTTCCACAGCTCTA-CTGTCCTCCT  1138


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