BAC Information

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BAC

Clone NameB6Ng01-265F15
Chromosome14 (Build37)
Map Location 90,556,176 - 90,688,660
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451
Downstream geneLOC100043336, EG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F15.bB6Ng01-265F15.g
ACCGA069026GA069027
length1,182792
definitionB6Ng01-265F15.b B6Ng01-265F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,556,176 - 90,557,011)(90,687,869 - 90,688,660)
sequence
gaattctttgtgtatgttggatattagccctctaccagatgtaggattgg
taaagatctttgcccaacctgttggttgctgtggttctttagggaactaa
aaccatccagtggaaaaaagacagcattttcaacaaatggtgctggcaca
actgggttatcctgtagaagaatgtgaattgacccattcttatctccttg
tactaaggtcaagtctaagtggatcaaggaactccacataaaaccagaga
cactgaaacttatagaggagaaagtggagaaaaaccttgaagatatgggc
atgggggaaaaaattcctgaatagaacagcaatggcttgtgctataagat
caagaattgacaaatgggacctcataaaattgccaagcttgtgtgaggca
aaagacactgtcaataagacaaaaagtccaccaacagtttaggagaggat
ctttaccaattctaaatcagataggggactaatatccaatatatataaag
aacttaagaacatggttcctttcttaaggacaagtacatattttttccca
agttttcccaccaaagttaaaagaggacactacttttatgttaatagagg
gccagacgacctccattgttaccctcatattttgcagtatatcttatgtg
gttttacttttgcaaatatccataacagaagagtttggaactcataagga
attatatcaatgttccagacaactactgagattttcccaggtgtagcaat
atcagttttcatgagagattgcctcaaaaactactgtgagctgccataaa
gagagaacctaaatgcagtgaatgccccaaaatagtagagatgtaaatgg
gaagctgaaaatctaacacaaaaagataatctgggtatgagatctggagg
gactaacatgtcagagccaactgatgctatcaaatgctatagatagtcta
tagttgaaagatttctgtattatggatggctagttcagattacctacccc
atctcaaaattcccctcaactcattaattcaaatgagcttctcatggctt
ctgactgaatgctctgctggcctcaactatctctgaagtctgttctcatt
tttctggtcgtccttatttctggctcaatttgttcatcatctgcaactca
tcctgtaaaaatgtcaggtaaacttggttccc

gaattcattggtggattagcaccttatggtctaaatatctaggaccaatt
atattgcaatattactaccagttagagagcacacttccaaatcataggaa
tttcacagacaataatgaaccctaggcctctatggtagaattcatgtatt
cattttttgccaaaaatatacatttgcttttcaaactaatttttactgaa
cttcaatagttaatataagtggacaagaggatgacataccttgaagatag
attcagataatgtatgttaaagaccgaaacttgttcttaatttataatac
ttttgtagatctaatcatggaacatagtgagaaagttattgattattgtt
ggagaattagaacttacacaattatattatagtttaaaattgataaatga
tgatacaaagcataaatctaaagaaagctaaaattatcattagattatcc
aagggaacatgggacttctatataacaattacctttgtcactttcatgga
aaacagaaacatgttcttttgtgagacaaagaaaaagaaaactgcaggac
aggaattgttgtggagaaactaaaatttaagaatgaaaaatattaattta
gtgtagatgtgtgtgtgagggggacagagttagtgacagagacagggaca
gagaaacagagagagaaaaattagtaacaattatttcatgatcttcgtct
gacatcctcagaggacaagtttcataatttgttcttttcttttaccatgt
ttattctttctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90556176_90557011
seq2: B6Ng01-265F15.b_398_1225

seq1  AATTGACAAATGGGACCTCATAAAATTGCCAAGCTTGTGTGAGGCAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACAAATGGGACCTCATAAAATTGCCAAGCTTGTGTGAGGCAAAAG  50

seq1  ACACTGTCAATAAGACAAAAAGTCCACCAACAGTTTAGGAGAGGATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTCAATAAGACAAAAAGTCCACCAACAGTTTAGGAGAGGATCTTT  100

seq1  ACCAATTCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACT  150

seq1  TAAGAACATGGTTCCTTTCTTAAGGACAAGTACATATTTTTTCCCAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACATGGTTCCTTTCTTAAGGACAAGTACATATTTTTTCCCAAGTT  200

seq1  TTCCCACCAAAGTTAAAAGAGGACACTACTTTTATGTTAATAGAGGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCAAAGTTAAAAGAGGACACTACTTTTATGTTAATAGAGGGCCA  250

seq1  GACGACCTCCATTGTTACCCTCATATTTTGCAGTATATCTTATGTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGACCTCCATTGTTACCCTCATATTTTGCAGTATATCTTATGTGGTTT  300

seq1  TACTTTTGCAAATATCCATAACAGAAGAGTTTGGAACTCATAAGGAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGCAAATATCCATAACAGAAGAGTTTGGAACTCATAAGGAATTA  350

seq1  TATCAATGTTCCAGACAACTACTGAGATTTTCCCAGGTGTAGCAATATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGTTCCAGACAACTACTGAGATTTTCCCAGGTGTAGCAATATCA  400

seq1  GTTTTCATGAGAGATTGCCTCAAAAACTACTGTGAGCTGCCATAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGAGAGATTGCCTCAAAAACTACTGTGAGCTGCCATAAAGAGA  450

seq1  GAACCTAAATGCAGTGAATGCCCCAAAATAGTAGAGATGTAAATGGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAAATGCAGTGAATGCCCCAAAATAGTAGAGATGTAAATGGGAAG  500

seq1  CTGAAAATCTAACACAAAAAGATAATCT-GGTATGAGATCTGGAGGGACT  549
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGAAAATCTAACACAAAAAGATAATCTGGGTATGAGATCTGGAGGGACT  550

seq1  AACATGTCAGAGCCAACTGATGCTATCAAATGCTATAGATAGTCTATAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTCAGAGCCAACTGATGCTATCAAATGCTATAGATAGTCTATAGT  600

seq1  TGAAAGATTTCTGTATTATGGATGGCTAGTTCAGATTACCTACCCCATCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATTTCTGTATTATGGATGGCTAGTTCAGATTACCTACCCCATCT  650

seq1  CAAAATTCCCCTCCAACCTCATTAATTCAAATGAGCTTCTCATGCCTTCT  699
      |||||||||||||  | ||||||||||||||||||||||||||| |||||
seq2  CAAAATTCCCCTC--AACTCATTAATTCAAATGAGCTTCTCATGGCTTCT  698

seq1  GACTGAATTGCTCTGCTTGGCCTCAAACTATCTCTGAAAGTCTGTTCTCA  749
      ||||||| |||||||| ||||||| ||||||||||| |||||||||||||
seq2  GACTGAA-TGCTCTGC-TGGCCTC-AACTATCTCTG-AAGTCTGTTCTCA  744

seq1  TTTTTCTGGGTCCTTCTTATTTTCTGGCTCAATTTG-TCATCATCTGCAA  798
      ||||||| |||| | |||| |||||||||||||||| |||||||||||||
seq2  TTTTTCT-GGTCGTCCTTA-TTTCTGGCTCAATTTGTTCATCATCTGCAA  792

seq1  CTCATCTCTGTAAAAATGTCAAGGTAAACTTGCTTCCC  836
      |||||| ||||||||||||| ||||||||||| |||||
seq2  CTCATC-CTGTAAAAATGTC-AGGTAAACTTGGTTCCC  828


seq1: chr14_90687869_90688660
seq2: B6Ng01-265F15.g_65_856 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAATAAACATGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAATAAACATGGTA  50

seq1  AAAGAAAAGAACAAATTATGAAACTTGTCCTCTGAGGATGTCAGACGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAACAAATTATGAAACTTGTCCTCTGAGGATGTCAGACGAAG  100

seq1  ATCATGAAATAATTGTTACTAATTTTTCTCTCTCTGTTTCTCTGTCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAATAATTGTTACTAATTTTTCTCTCTCTGTTTCTCTGTCCCTG  150

seq1  TCTCTGTCACTAACTCTGTCCCCCTCACACACACATCTACACTAAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCACTAACTCTGTCCCCCTCACACACACATCTACACTAAATTAA  200

seq1  TATTTTTCATTCTTAAATTTTAGTTTCTCCACAACAATTCCTGTCCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCATTCTTAAATTTTAGTTTCTCCACAACAATTCCTGTCCTGCA  250

seq1  GTTTTCTTTTTCTTTGTCTCACAAAAGAACATGTTTCTGTTTTCCATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTTCTTTGTCTCACAAAAGAACATGTTTCTGTTTTCCATGAA  300

seq1  AGTGACAAAGGTAATTGTTATATAGAAGTCCCATGTTCCCTTGGATAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAAGGTAATTGTTATATAGAAGTCCCATGTTCCCTTGGATAATC  350

seq1  TAATGATAATTTTAGCTTTCTTTAGATTTATGCTTTGTATCATCATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAATTTTAGCTTTCTTTAGATTTATGCTTTGTATCATCATTTAT  400

seq1  CAATTTTAAACTATAATATAATTGTGTAAGTTCTAATTCTCCAACAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAAACTATAATATAATTGTGTAAGTTCTAATTCTCCAACAATAA  450

seq1  TCAATAACTTTCTCACTATGTTCCATGATTAGATCTACAAAAGTATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACTTTCTCACTATGTTCCATGATTAGATCTACAAAAGTATTATA  500

seq1  AATTAAGAACAAGTTTCGGTCTTTAACATACATTATCTGAATCTATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAACAAGTTTCGGTCTTTAACATACATTATCTGAATCTATCTTC  550

seq1  AAGGTATGTCATCCTCTTGTCCACTTATATTAACTATTGAAGTTCAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATGTCATCCTCTTGTCCACTTATATTAACTATTGAAGTTCAGTAA  600

seq1  AAATTAGTTTGAAAAGCAAATGTATATTTTTGGCAAAAAATGAATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTTTGAAAAGCAAATGTATATTTTTGGCAAAAAATGAATACATG  650

seq1  AATTCTACCATAGAGGCCTAGGGTTCATTATTGTCTGTGAAATTCCTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTACCATAGAGGCCTAGGGTTCATTATTGTCTGTGAAATTCCTATG  700

seq1  ATTTGGAAGTGTGCTCTCTAACTGGTAGTAATATTGCAATATAATTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAGTGTGCTCTCTAACTGGTAGTAATATTGCAATATAATTGGTC  750

seq1  CTAGATATTTAGACCATAAGGTGCTAATCCACCAATGAATTC  792
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATATTTAGACCATAAGGTGCTAATCCACCAATGAATTC  792


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