BAC Information

Click to search

BAC

Clone NameB6Ng01-265J15
Chromosome14 (Build37)
Map Location 50,859,533 - 50,860,724
singlet/doubletsinglet
Overlap genenone
Upstream gene1700011H14Rik, Slc35f4, 3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731
Downstream geneOlfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265J15.bB6Ng01-265J15.g
ACCGA069209GA069210
length1,1881,032
definitionB6Ng01-265J15.b B6Ng01-265J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaggtcaaaaggctgctgagatattatcttggtcaaaaacat
cattgccactcataactactgagtgatggttccattttaagaattttaca
actttgttatctaaaaaacattaacaatgtttattaatcataaaaggcaa
attgaatatgtgtacttaaaaagtatgtaaatatactttctttttcatgg
gaaaacaggaagctacacaaaaaataatattaatggtaattattgaaatt
tgggcattgattgtccagtgacagttaaaaacaaaacagtgaggaagatt
gtagtttgatagtgcagttcttttgtatagcatttaagatatgaacttgt
agttttattccctcgtgtcatctaccttcttctgacctgggctatgaagt
aagccacaactacactggatgtaatattgattctttgaaggcagaagatg
tagtaaatgaaattttgtgttaggtgctcaaaaaggatgccaaattattt
tggaagagttgctttgatttttgctaagatttattctttgactagaaacc
ataatgccactctgttaatattcaatcaaaagaaatttcaatcctagtgt
cagatgtccatgtgatgcttgtgatacgtgtttccattgctattttaaac
atattttaagcatcattagaagtgagttaatgaaagagaaataaatagtg
gagaaaatcagagtttattgattctatttccttttgaacattctctgaat
ttatgacaaagacttaattcttttctaactctattaatatcaagaataat
tttaatgttactatagaaggacactttaaatttcttggcacagattcacc
ttgtttcatacacatatttaaaattttgatcactttaggtggacttagaa
aatttgtatataaaataagcaaaaatcacatctttgaagatggatacata
taagattggatatctacaaatagtcaaattatcactaaaactttagtgaa
acatactggttaattctacatgatttaatgtggcaagtgactcatgattt
tacctataaacataccgattaacttaaaaaagaggaaagaggtatattgt
tgctaattagattttttttataacctgtgagctaattaccatagaattac
tgaatcctgacgatcttggccttggattaatttttcta
gaattctttgcttagctctgtactccatttttaatgaggatatttgaatt
tctagagtccggcttcttgagctctttgtatatactggatattaatcccc
tatctgatttaggataggtaaagatcctttcccaatctgttagtagtctt
tttgtcttattgacagtttcttctgccttacacaagctttgcaatgttat
gaggtcccatttgtcaaatcttgatcttacagcacaagccattgctattc
agttttggaattattcccctgtgcccatatctttgaggcttctccccact
ttcacctctataaatttcaatgtctttggttttatgtgaagggctttgat
ccacttaaacttgagctttttataaggagataagaatgtatatatttgca
ttcttctacatgataactgccagttgtgccaccaccatttgttgaaaatg
ctgtcattttcccactggatggttttagctcccttgtcaatgatcaagtg
accataggtgtgtggattcacttctgggccttcaattttattcattgatc
cacctgtctgtggctgtaccggtaccatgaagtatttatcacaattgctc
tgtagtagagtttaaggtcaggcatggtgattccaccagaggttctttta
ttgttgagaatatttttgatctcctaggttttttattattccagatgact
tttcaaattgccctttctaattcattgaagaatttagttggaattttgag
ggtattacattgaatctgtagattgcttttggcaagataggatttttact
ttatttaatattgctgatccatgacatgggagatgctttccatccttctg
agatcttcttcaattcctttctcaggaacttgaagttcttaatcatacag
atccttttccttccttagttagagtcacgacaagtatttatatggttgtg
actatgtgaagggtgtggtttccctaattctttctaggcactctatcctt
tgttagagaaagggcattggattgttttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50859533_50860724
seq2: B6Ng01-265J15.b_49_1236 (reverse)

seq1  TAGAAAAATTAAT-CAAGCACAGATTTGTCAAGTATTCAGTAATCTAATG  49
      ||||||||||||| ||||  ||   | ||| || ||||||||||   |||
seq2  TAGAAAAATTAATCCAAGGCCAAGATCGTC-AGGATTCAGTAATTCTATG  49

seq1  TTATTTTAGCTCAATTAGTTAT-AAAAAAATCTATATAGCACCAATATAA  98
       ||  ||||||| |   ||||| |||||||||||  ||||| |||||| |
seq2  GTA-ATTAGCTC-ACAGGTTATAAAAAAAATCTAATTAGCAACAATAT-A  96

seq1  CTTCTTTCCTCTTTTTTAGTTAAATCGGTATGTTTATAGGTAAAATCATG  148
      | ||||||||||||||||  | ||||||||||||||||||||||||||||
seq2  CCTCTTTCCTCTTTTTTAAGTTAATCGGTATGTTTATAGGTAAAATCATG  146

seq1  AGTCACTTGCCACATTAAATCATTGTAGAATT-ACCAGTATGTTTCACTT  197
      |||||||||||||||||||||| ||||||||| ||||||||||||||| |
seq2  AGTCACTTGCCACATTAAATCA-TGTAGAATTAACCAGTATGTTTCAC-T  194

seq1  AAAGTTTTAGTGATAATTTGACTATTTGTAGATATCCAATCTTATATTGT  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGTTTTAGTGATAATTTGACTATTTGTAGATATCCAATCTTATA-TGT  243

seq1  ATCCATCTTCAAAGATGTGATTTTTGCTTATTTTATATACAAATTTTCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCTTCAAAGATGTGATTTTTGCTTATTTTATATACAAATTTTCTA  293

seq1  AGTCCACCTAAAGTGATCAAAATTTTAAATATGTGTATGAAACAAGGTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACCTAAAGTGATCAAAATTTTAAATATGTGTATGAAACAAGGTGA  343

seq1  ATCTGTGCCAAGAAATTTAAAGTGTCCTTCTATAGTAACATTAAAATTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCCAAGAAATTTAAAGTGTCCTTCTATAGTAACATTAAAATTAT  393

seq1  TCTTGATATTAATAGAGTTAGAAAAGAATTAAGTCTTTGTCATAAATTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATATTAATAGAGTTAGAAAAGAATTAAGTCTTTGTCATAAATTCA  443

seq1  GAGAATGTTCAAAAGGAAATAGAATCAATAAACTCTGATTTTCTCCACTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTTCAAAAGGAAATAGAATCAATAAACTCTGATTTTCTCCACTA  493

seq1  TTTATTTCTCTTTCATTAACTCACTTCTAATGATGCTTAAAATATGTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCTTTCATTAACTCACTTCTAATGATGCTTAAAATATGTTTA  543

seq1  AAATAGCAATGGAAACACGTATCACAAGCATCACATGGACATCTGACACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAATGGAAACACGTATCACAAGCATCACATGGACATCTGACACT  593

seq1  AGGATTGAAATTTCTTTTGATTGAATATTAACAGAGTGGCATTATGGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGAAATTTCTTTTGATTGAATATTAACAGAGTGGCATTATGGTTT  643

seq1  CTAGTCAAAGAATAAATCTTAGCAAAAATCAAAGCAACTCTTCCAAAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAAAGAATAAATCTTAGCAAAAATCAAAGCAACTCTTCCAAAATA  693

seq1  ATTTGGCATCCTTTTTGAGCACCTAACACAAAATTTCATTTACTACATCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCATCCTTTTTGAGCACCTAACACAAAATTTCATTTACTACATCT  743

seq1  TCTGCCTTCAAAGAATCAATATTACATCCAGTGTAGTTGTGGCTTACTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCAAAGAATCAATATTACATCCAGTGTAGTTGTGGCTTACTTC  793

seq1  ATAGCCCAGGTCAGAAGAAGGTAGATGACACGAGGGAATAAAACTACAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCAGGTCAGAAGAAGGTAGATGACACGAGGGAATAAAACTACAAG  843

seq1  TTCATATCTTAAATGCTATACAAAAGAACTGCACTATCAAACTACAATCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTTAAATGCTATACAAAAGAACTGCACTATCAAACTACAATCT  893

seq1  TCCTCACTGTTTTGTTTTTAACTGTCACTGGACAATCAATGCCCAAATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTGTTTTGTTTTTAACTGTCACTGGACAATCAATGCCCAAATTT  943

seq1  CAATAATTACCATTAATATTATTTTTTGTGTAGCTTCCTGTTTTCCCATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTACCATTAATATTATTTTTTGTGTAGCTTCCTGTTTTCCCATG  993

seq1  AAAAAGAAAGTATATTTACATACTTTTTAAGTACACATATTCAATTTGCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGTATATTTACATACTTTTTAAGTACACATATTCAATTTGCC  1043

seq1  TTTTATGATTAATAAACATTGTTAATGTTTTTTAGATAACAAAGTTGTAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATTAATAAACATTGTTAATGTTTTTTAGATAACAAAGTTGTAA  1093

seq1  AATTCTTAAAATGGAACCATCACTCAGTAGTTATGAGTGGCAATGATGTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAAAATGGAACCATCACTCAGTAGTTATGAGTGGCAATGATGTT  1143

seq1  TTTGACCAAGATAATATCTCAGCAGCCTTTTGACCTGCTGAATTC  1192
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCAAGATAATATCTCAGCAGCCTTTTGACCTGCTGAATTC  1188