BAC Information

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BAC

Clone NameB6Ng01-265L07
Chromosome14 (Build37)
Map Location 80,570,308 - 80,737,320
singlet/doubletdoublet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265L07.bB6Ng01-265L07.g
ACCGA069286GA069287
length1,1351,106
definitionB6Ng01-265L07.b B6Ng01-265L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,736,183 - 80,737,320)(80,570,308 - 80,571,425)
sequence
gaattccaggacagccagggctacatagtgtcttaaaaaataaaaaaata
gtaagtaaataagagagagagagagagagagagagagagagagagagaga
gagacttagaatttgccatgaaactatttaaaagatcaataacaatgcag
caatgcaaaaatctatattttggtgtgaaaagacaaaggaggacaaagta
atggcctgtttgttgttcgtgcatattttgaaaaggaagagaaaaaagta
gacagaaagaacttttgaaagagattttaactgatggaactcagtacaac
acagagagagaatgggaagagacttgagatagactggaacacaatactcc
tatctaggaacagtagccacaaaggctaggaggaaggaatgcacactagg
acgtgtccatggtcttggatcaaggcatcctcaggagctgctactaaaat
gatgcaaatgtgatggacttggtacccagtgctaatgagttaagattcta
tcctctctgcagctggtggccattaaaggggtccaagcaagacaaaggca
tagacaaatgcttttgaacccgagattctgccttcagtgttaaggctaaa
tttggaggaggggagcataatactggactctaccaggacaggataagttg
atgtaaagtaggtaggaaatgatggtgacatgtgctaaagtagtgccagt
gaggatgaaaaagggtacacagatttaaggatttaagatggtaaaataaa
gagagcatagaaatagattatgaagaaaagaagaaatctaggaagccaaa
gaaaattatatatggcatgtgtgtatgtgcacatgcatgtttgtacagat
gtgatgagttatatttcccatcctgaaagatctatgtaccaaacatacaa
atttcagttttcgcctgattcattgagcatctatgaccatcctcagctct
ttctcttcaaatattcagatgatatgcaactatacatgcacagagcaaac
tatgtctttatatagttaggttccctcataggtcatttaggttatctatc
aatgaccattatcactaacttttcaatgccagtactgaatcttacagact
gtacaaaaggatgaatgattcagaacgagtcttgt
gaattctgtatttaatttcagaggggtgggtatgaaagagcagagtgttt
gcttgggcagggatttgaaaccttttatagactttttgagttcttcagat
gaaggagatccacatggctgttcttagtagagaaagtgggtctgcaagcc
ctcgcaggaactgagcgcctctccccaatgtataagcattattctgtata
attatggatattttcacttccaaaaatattttttttccagaagctgctat
ttcaaaggctttcaattctgtgtgtcattatcaaataatcttttttgtac
tcgggtgtttattattggattgcaacaacgataaagctccaggggttttt
gtcttctttggtatgctaattagcccgtttccttttgatctttttcctac
cgaagagagtgaaaagctatctcggcggggaatcttagtgctgtacattc
atcccctcatctccataatctgtggatgagaggaggacgacaatttcact
gctgaattagggcttctaggggctttagttagagctgaggttgcccgata
atcccgctggcacccccaagttgggcactgtgtaggaagactgcagagtg
tggaaaaaaaagcacagagtacttcatttgactgagtgagtgtaattgtt
tttatttcttctctgagcattcaatccctgtaaatctatgccattttgcc
caattgttaacttttagatttctttctcctattcatgtgtttagtgacaa
tgactgaatgcttagtttgaagaaaatggcctgaagagttaaaacagaga
tgcagctgacaaaaatttgctagactatgcaactgactttcaaaagacac
agttccaccgtatacagaattactggggaaatacacaggcacctgggtgt
tgaaggaacaggtttcagtagcttggcttgggaacagacagtgttccttg
gtctcctacagtttattattaagatctaagaatttagactagcgaagcag
ttaaatgggaaaatcatttacatcatatgagggtcaaggaagttggcatt
aaatgtgtagtgtagaactaaccccacagtgttagcacacaccccaaccc
acatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80736183_80737320
seq2: B6Ng01-265L07.b_49_1183 (reverse)

seq1  ACAAGGACTCCTTCTGATTCATTCATCTTTTTTTGTTACCAGTCTGT-AG  49
      |||| ||||| |||||| ||||||||| |||| |     |||||||| ||
seq2  ACAA-GACTCGTTCTGAATCATTCATCCTTTTGT----ACAGTCTGTAAG  45

seq1  A-TCAGTACTGGCATGGAAAAGTTAGTGATAATGTTCATTGATAGATAA-  97
      | ||||||||||||| |||||||||||||||||| |||||||||||||| 
seq2  ATTCAGTACTGGCATTGAAAAGTTAGTGATAATGGTCATTGATAGATAAC  95

seq1  CTAAATGACCTATGAGGGAACCTAACTATAT-AAGACATAGTTTTGCTCT  146
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  CTAAATGACCTATGAGGGAACCTAACTATATAAAGACATAG-TTTGCTCT  144

seq1  GTGCATGTATAGTTGCATATCATCTGAATATTTTGAAGAGGAAGAGCTGA  196
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  GTGCATGTATAGTTGCATATCATCTGAATA-TTTGAAGAGAAAGAGCTGA  193

seq1  GGATGGTCATAGATGCTCAATGAATCAGGCGAAAACTGAAATTTGTATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTCATAGATGCTCAATGAATCAGGCGAAAACTGAAATTTGTATGT  243

seq1  TTGGTACATAGATCTTTCAGGATGGGAAATATAACTCATCACATCTGTAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACATAGATCTTTCAGGATGGGAAATATAACTCATCACATCTGTAC  293

seq1  AAACATGCATGTGCACATACACACATGCCATATATAATTTTCTTTGGCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCATGTGCACATACACACATGCCATATATAATTTTCTTTGGCTT  343

seq1  CCTAGATTTCTTCTTTTCTTCATAATCTATTTCTATGCTCTCTTTATTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATTTCTTCTTTTCTTCATAATCTATTTCTATGCTCTCTTTATTTT  393

seq1  ACCATCTTAAATCCTTAAATCTGTGTACCCTTTTTCATCCTCACTGGCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTTAAATCCTTAAATCTGTGTACCCTTTTTCATCCTCACTGGCAC  443

seq1  TACTTTAGCACATGTCACCATCATTTCCTACCTACTTTACATCAACTTAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAGCACATGTCACCATCATTTCCTACCTACTTTACATCAACTTAT  493

seq1  CCTGTCCTGGTAGAGTCCAGTATTATGCTCCCCTCCTCCAAATTTAGCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGGTAGAGTCCAGTATTATGCTCCCCTCCTCCAAATTTAGCCT  543

seq1  TAACACTGAAGGCAGAATCTCGGGTTCAAAAGCATTTGTCTATGCCTTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGAAGGCAGAATCTCGGGTTCAAAAGCATTTGTCTATGCCTTTG  593

seq1  TCTTGCTTGGACCCCTTTAATGGCCACCAGCTGCAGAGAGGATAGAATCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTGGACCCCTTTAATGGCCACCAGCTGCAGAGAGGATAGAATCT  643

seq1  TAACTCATTAGCACTGGGTACCAAGTCCATCACATTTGCATCATTTTAGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCATTAGCACTGGGTACCAAGTCCATCACATTTGCATCATTTTAGT  693

seq1  AGCAGCTCCTGAGGATGCCTTGATCCAAGACCATGGACACGTCCTAGTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTCCTGAGGATGCCTTGATCCAAGACCATGGACACGTCCTAGTGT  743

seq1  GCATTCCTTCCTCCTAGCCTTTGTGGCTACTGTTCCTAGATAGGAGTATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTTCCTCCTAGCCTTTGTGGCTACTGTTCCTAGATAGGAGTATT  793

seq1  GTGTTCCAGTCTATCTCAAGTCTCTTCCCATTCTCTCTCTGTGTTGTACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCAGTCTATCTCAAGTCTCTTCCCATTCTCTCTCTGTGTTGTACT  843

seq1  GAGTTCCATCAGTTAAAATCTCTTTCAAAAGTTCTTTCTGTCTACTTTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCATCAGTTAAAATCTCTTTCAAAAGTTCTTTCTGTCTACTTTTT  893

seq1  TCTCTTCCTTTTCAAAATATGCACGAACAACAAACAGGCCATTACTTTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTTTTCAAAATATGCACGAACAACAAACAGGCCATTACTTTGT  943

seq1  CCTCCTTTGTCTTTTCACACCAAAATATAGATTTTTGCATTGCTGCATTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTGTCTTTTCACACCAAAATATAGATTTTTGCATTGCTGCATTG  993

seq1  TTATTGATCTTTTAAATAGTTTCATGGCAAATTCTAAGTCTCTCTCTCTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGATCTTTTAAATAGTTTCATGGCAAATTCTAAGTCTCTCTCTCTC  1043

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTACTTACTATTTTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTACTTACTATTTTTT  1093

seq1  TATTTTTTAAGACACTATGTAGCCCTGGCTGTCCTGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTAAGACACTATGTAGCCCTGGCTGTCCTGGAATTC  1135

seq1: chr14_80570308_80571425
seq2: B6Ng01-265L07.g_68_1173

seq1  GAATTCTGTATTTAATTTCAGAGGGGTGGGTATGAAAGAGCAGAGTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATTTAATTTCAGAGGGGTGGGTATGAAAGAGCAGAGTGTTT  50

seq1  GCTTGGGCAGGGATTTGAAACCTTTTATAGACTTTTTGAGTTCTTCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGCAGGGATTTGAAACCTTTTATAGACTTTTTGAGTTCTTCAGAT  100

seq1  GAAGGAGATCCACATGGCTGTTCTTAGTAGAGAAAGTGGGTCTGCAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGATCCACATGGCTGTTCTTAGTAGAGAAAGTGGGTCTGCAAGCC  150

seq1  CTCGCAGGAACTGAGCGCCTCTCCCCAATGTATAAGCATTATTCTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCAGGAACTGAGCGCCTCTCCCCAATGTATAAGCATTATTCTGTATA  200

seq1  ATTATGGATATTTTCACTTCCAAAAATATTTTTTTTCCAGAAGCTGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGATATTTTCACTTCCAAAAATATTTTTTTTCCAGAAGCTGCTAT  250

seq1  TTCAAAGGCTTTCAATTCTGTGTGTCATTATCAAATAATCTTTTTTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGCTTTCAATTCTGTGTGTCATTATCAAATAATCTTTTTTGTAC  300

seq1  TCGGGTGTTTATTATTGGATTGCAACAACGATAAAGCTCCAGGGGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTGTTTATTATTGGATTGCAACAACGATAAAGCTCCAGGGGTTTTT  350

seq1  GTCTTCTTTGGTATGCTAATTAGCCCGTTTCCTTTTGATCTTTTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTGGTATGCTAATTAGCCCGTTTCCTTTTGATCTTTTTCCTAC  400

seq1  CGAAGAGAGTGAAAAGCTATCTCGGCGGGGAATCTTAGTGCTGTACATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAGAGTGAAAAGCTATCTCGGCGGGGAATCTTAGTGCTGTACATTC  450

seq1  ATCCCCTCATCTCCATAATCTGTGGATGAGAGGAGGACGACAATTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTCATCTCCATAATCTGTGGATGAGAGGAGGACGACAATTTCACT  500

seq1  GCTGAATTAGGGCTTCTAGGGGCTTTAGTTAGAGCTGAGGTTGCCCGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATTAGGGCTTCTAGGGGCTTTAGTTAGAGCTGAGGTTGCCCGATA  550

seq1  ATCCCGCTGGCACCCCCAAGTTGGGCACTGTGTAGGAAGACTGCAGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGCTGGCACCCCCAAGTTGGGCACTGTGTAGGAAGACTGCAGAGTG  600

seq1  TGGAAAAAAAAGCACAGAGTACTTCATTTGACTGAGTGAGTGTAATTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAGCACAGAGTACTTCATTTGACTGAGTGAGTGTAATTGTT  650

seq1  TTTATTTCTTCTCTGAGCATTCAATCCCTGTAAATCTATGCCATTTTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTTCTCTGAGCATTCAATCCCTGTAAATCTATGCCATTTTGCC  700

seq1  CAATTGTTAACTTTTAGATTTCTTTCTCCTATTCATGTGTTTAGTGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTTAACTTTTAGATTTCTTTCTCCTATTCATGTGTTTAGTGACAA  750

seq1  TGACTGAATGCTTAGTTTGAAGAAAATGGCCTGAAGAGTTAAAACAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAATGCTTAGTTTGAAGAAAATGGCCTGAAGAGTTAAAACAGAGA  800

seq1  TGCAGCTGACAAAAATTTGCTAGACTATGCAACTGACTTTCAAAAGACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTGACAAAAATTTGCTAGACTATGCAACTGACTTTCAAAAGACAC  850

seq1  AGTTCCACCGTATACAGAATTACTGGGGAAATACACAGGCACCTGGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACCGTATACAGAATTACTGGGGAAATACACAGGCACCTGGGTGT  900

seq1  TGAAGGAACAGGTTTCAGTAGCTTGGGCTTGGGAACAGACAGTGTTCCTT  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAAGGAACAGGTTTCAGTAGCTT-GGCTTGGGAACAGACAGTGTTCCTT  949

seq1  GGTCTCCTACAGTTTATTATTAAGATCTAAGAATTTTAGACATAGGCGAA  1000
      ||||||||||||||||||||||||||||||||| ||||||| || |||||
seq2  GGTCTCCTACAGTTTATTATTAAGATCTAAGAA-TTTAGAC-TA-GCGAA  996

seq1  GCAGTTAAATGGGAAAATTCATTTACCATCATTATGAGGGTCAAGGAAGT  1050
      ||||||||||||||||| ||||||| ||||| ||||||||||||||||||
seq2  GCAGTTAAATGGGAAAA-TCATTTA-CATCA-TATGAGGGTCAAGGAAGT  1043

seq1  TGGCATTTAAATGTTGTAGTGTAGGAACTAACCCCAACCAGTGTAAGCAC  1100
      ||||| ||||||| ||||||||| ||||||||||||  |||||| |||||
seq2  TGGCA-TTAAATG-TGTAGTGTA-GAACTAACCCCA--CAGTGTTAGCAC  1088

seq1  ACACACAAACACACATAC  1118
      |||| | ||| |||||||
seq2  ACACCCCAACCCACATAC  1106