BAC Information

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BAC

Clone NameB6Ng01-266A05
Chromosome14 (Build37)
Map Location 33,993,512 - 34,154,410
singlet/doubletdoublet
Overlap geneEG622657, Arhgap22
Upstream geneTimm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18
Downstream geneMapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266A05.bB6Ng01-266A05.g
ACCGA069515GA069516
length349479
definitionB6Ng01-266A05.b B6Ng01-266A05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,993,512 - 33,993,860)(34,153,926 - 34,154,410)
sequence
tatttgcatccgaacacgagctttgctcttctgttgagctccataaactg
attctaaaatttatgtgaaaaagcaaagtactgaaaaagaaagaataata
gaacatttctttccagatatgaaggtttgtaataaacaaaccttcggtaa
gcaatgttgcttagggcttgggataacagacaaattgagaaaatagccgt
aagcagagatatggatgagtggagagcttactgcagggctcttctgtaac
aatagaccatccatgtggggaaaccaatgagcatttataagtgacctgga
agtggaagtgagaggatctggggaagaggggggagcagtgggagagtgg
agctattcaacgaaaacaaacagacagaaccctaatgtctcagtctgttg
accttaaaacacacgtagtttctgggttgttttcagctgtttgactttcc
ctccttcctgcctctttgcattcctgatgtctgagtaggtgccaggcact
gggtttccaatggttgggtgctgggggtttatattcctataaatactcct
gagcctccctgtggggtaaagttaagttcagggcaggagtttcctaggtg
gatctagctggggcaggcagagctcatgcttcccctacagagggaacggt
ccctgtctattccacccagtgtctcatggttgtgtggcttcccagtctgg
cagatgggaataagaaccaatccgtcctgtgctggggtggacgtgacacc
tccgatccttcttcgctcagtcgtgagtggtttcctccaatgcttgtggt
gacaagaacacaggggtggggggtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33993512_33993860
seq2: B6Ng01-266A05.b_53_401

seq1  TATTTGCATCCGAACACGAGCTTTGCTCTTCTGTTGAGCTCCATAAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATCCGAACACGAGCTTTGCTCTTCTGTTGAGCTCCATAAACTG  50

seq1  ATTCTAAAATTTATGTGAAAAAGCAAAGTACTGAAAAAGAAAGAATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAATTTATGTGAAAAAGCAAAGTACTGAAAAAGAAAGAATAATA  100

seq1  GAACATTTCTTTCCAGATATGAAGGTTTGTAATAAACAAACCTTCGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCTTTCCAGATATGAAGGTTTGTAATAAACAAACCTTCGGTAA  150

seq1  GCAATGTTGCTTAGGGCTTGGGATAACAGACAAATTGAGAAAATAGCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTTGCTTAGGGCTTGGGATAACAGACAAATTGAGAAAATAGCCGT  200

seq1  AAGCAGAGATATGGATGAGTGGAGAGCTTACTGCAGGGCTCTTCTGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGATATGGATGAGTGGAGAGCTTACTGCAGGGCTCTTCTGTAAC  250

seq1  AATAGACCATCCATGTGGGGAAACCAATGAGCATTTATAAGTGACCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACCATCCATGTGGGGAAACCAATGAGCATTTATAAGTGACCTGGA  300

seq1  AGTGGAAGTGAGAGGATCTGGGGAAGAGGGGGGAGCAGTGGGAGAGTGG  349
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGTGAGAGGATCTGGGGAAGAGGGGGGAGCAGTGGGAGAGTGG  349

seq1: chr14_34153926_34154410
seq2: B6Ng01-266A05.g_68_552 (reverse)

seq1  ACCCCACCCCCCACCCCTGTGTTCTTGTCACCACAAGCATTGGAGGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCCCCACCCCTGTGTTCTTGTCACCACAAGCATTGGAGGAAAC  50

seq1  CACTCACGACTGAGCGAAGAAGGATCGGAGGTGTCACGTCCACCCCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACGACTGAGCGAAGAAGGATCGGAGGTGTCACGTCCACCCCAGCA  100

seq1  CAGGACGGATTGGTTCTTATTCCCATCTGCCAGACTGGGAAGCCACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACGGATTGGTTCTTATTCCCATCTGCCAGACTGGGAAGCCACACAA  150

seq1  CCATGAGACACTGGGTGGAATAGACAGGGACCGTTCCCTCTGTAGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGACACTGGGTGGAATAGACAGGGACCGTTCCCTCTGTAGGGGAA  200

seq1  GCATGAGCTCTGCCTGCCCCAGCTAGATCCACCTAGGAAACTCCTGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCTCTGCCTGCCCCAGCTAGATCCACCTAGGAAACTCCTGCCCT  250

seq1  GAACTTAACTTTACCCCACAGGGAGGCTCAGGAGTATTTATAGGAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAACTTTACCCCACAGGGAGGCTCAGGAGTATTTATAGGAATATA  300

seq1  AACCCCCAGCACCCAACCATTGGAAACCCAGTGCCTGGCACCTACTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCAGCACCCAACCATTGGAAACCCAGTGCCTGGCACCTACTCAGA  350

seq1  CATCAGGAATGCAAAGAGGCAGGAAGGAGGGAAAGTCAAACAGCTGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGAATGCAAAGAGGCAGGAAGGAGGGAAAGTCAAACAGCTGAAAA  400

seq1  CAACCCAGAAACTACGTGTGTTTTAAGGTCAACAGACTGAGACATTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAGAAACTACGTGTGTTTTAAGGTCAACAGACTGAGACATTAGGG  450

seq1  TTCTGTCTGTTTGTTTTCGTTGAATAGCTGAATTC  485
      |||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTGTTTGTTTTCGTTGAATAGCTGAATTC  485