BAC Information

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BAC

Clone NameB6Ng01-266F03
Chromosome14 (Build37)
Map Location 36,720,967 - 36,721,491
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277
Downstream geneLOC665933, 4930474N05Rik, Gcap14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266F03.bB6Ng01-266F03.g
ACCGA069745GA069746
length1,2031,194
definitionB6Ng01-266F03.b B6Ng01-266F03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaacttaggagtttca
ttaggtcccatttatcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctaaaagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaactagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcctctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatattttatattat
ttgtgactattgagaacggtgttgtttccctaatttcttctcagcctgtt
tattcttgtgtagaagaaaggcattgacttgtttgagtaatttataatcc
agctactcacgagctgtttatcagtttaggagttctctgggtggattttt
taggtcacttatatatatcctatcatatccatctgcaaagtgaaattgac
tctctttccattggattccatgagtctccctttgttgtgtgcaatattgc
tct

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactatcggaggatcccgcaatacctctcctaggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaataaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggactatgtagagactgccatatccagggatccatcccataatc
agcatccaaatgctgacaccattgcatatactagcaagattttatcaaaa
ggacccagatgtagctgtctcttgtgagactatgccaggggcctagcaaa
cacagaagtgggatgctcacagtcagctaatggatggatcacaggctccc
aatggaggagctagagaaagtacccaagagctaaagggatctgcaaccct
ataggtgacacattatgactaccagtaccccgagctctgactctagctgc
atattgtatcaaaagatgactagtcgcatcactggcaaagagaaggccat
gatacgcaaacttttatgcccagtacaggtaacgcagttcaaaatgggga
atatgggtgtggtttattggagggaacatcttgtcttacctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36720967_36721491
seq2: B6Ng01-266F03.b_732_1247 (reverse)

seq1  AGAGCAAT----TACACAACAAAGGGAGATCAAGGGGATACAATTTGGAA  46
      ||||||||     ||||||||||||||||   | || || |||  |||||
seq2  AGAGCAATATTGCACACAACAAAGGGAGACTCATGGAATCCAA--TGGAA  48

seq1  AGGAAGAAGTCAAAATATCACTTTTTGCAGAT-GATATGATAG--TATAT  93
      ||  || ||||  ||| ||||  ||||||||| ||||||||||  |||||
seq2  AG--AG-AGTC--AATTTCAC--TTTGCAGATGGATATGATAGGATATAT  91

seq1  ATAAGTGACCCTATAAATTCCA-CCAGAGAACTCCTAAACCCGATGAACA  142
      |||||||| |||| ||| |||| |||||||||||||||| | ||| ||||
seq2  ATAAGTGA-CCTAAAAAATCCACCCAGAGAACTCCTAAA-CTGATAAACA  139

seq1  GCTTCGATGAGGTGGCTGGATACAAAATTAACTCAAACAAGTCAATGGCC  192
      || ||| ||| || |||||||   ||||| |||||||||||||||| |||
seq2  GC-TCG-TGA-GTAGCTGGATTATAAATT-ACTCAAACAAGTCAAT-GCC  184

seq1  TTTC-TCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGAGATACAA  241
      |||| ||||||| |||||||||||||||||| |||||||||| || ||||
seq2  TTTCTTCTACAC-AAGAATAAACAGGCTGAG-AAGAAATTAGGGAAACAA  232

seq1  CACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTA  291
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACCGTTCTCAATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTA  282

seq1  ACTAAGGAAGTGAAAGAACTGTATGAAAAGAACTTCAAGTATATGAAGAA  341
      ||||||||||||||||| |||||||| || |||||||||| | |||||||
seq2  ACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAA  332

seq1  AGAAATTAAAGAAGGTCTCAGAAGATGGAAAGATCTCCCATGCTCATGGA  391
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAAGAGGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGA  382

seq1  TTGGCAGGATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTAC  441
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGGCAGGATCAATATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTAC  432

seq1  AGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATT  482

seq1  GGAAAGAACAATCTGCAAATTCATCTGGAATAAC  525
       ||| || |||| |||||||||||||||||||||
seq2  AGAAGGAGCAATTTGCAAATTCATCTGGAATAAC  516


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