BAC Information

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BAC

Clone NameB6Ng01-266M17
Chromosome14 (Build37)
Map Location 12,203,558 - 12,204,506
singlet/doubletsinglet
Overlap genenone
Upstream geneFhit, LOC100041974, LOC667030, EG382843, LOC100042427
Downstream geneLOC667059, LOC100041996, Ptprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266M17.bB6Ng01-266M17.g
ACCGA070099GA070100
length9921,180
definitionB6Ng01-266M17.b B6Ng01-266M17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcactcatgggtggaggaaagacaactgcataatacgaaacaag
gcctctggtgttgtactttgggaaacacaaagcacgttccagtatgagtt
atttccttatccagaagagggagactgtgctggggagagtgaagagtagc
tcagcatggattcccagaagacagacaagcattcagtctgatttagggaa
acaagtgtcactggactaagggttctgttttccctgctcactctttcaga
gcatagcaaattatttcaaggaaactggagaatatgcggtagatatgtat
ggtggattaatattttccaaatatggccaactcctacttcaagagatgga
atcttccttctccatgaccctttgctttcaaagaatgcagttctgtcaat
ggaggaaggggaataaaggaaaaggaagcattaaaaggaggtagacaagc
caaagaagtgagaactcattctaaagaccttctaaaaagtcagggggaaa
cctacttcagaagctcccaaaaatgttaacatgtattaaaagagtttaat
ggagttgacctatgatgagcaacagtgcccctactggacaccacaggcta
agagattaaaaagtccagtaccaaagaagggctgtctctattagatccca
tagatagccaagtacgtggtgtacagccataaaacaccacatacttgagt
catagaacacaaaaattcaaattggcactaaccagaaagcttattaaaac
tagctaactgaaaggtgctatgcatactatcagagaagaaacagaatcat
ctatcttattcaactgtgaatccttcaagatataataatgacttgcctgg
caagctatgcctactggcgaaatggtggcaggaatattttagaagaaacc
aactttcttattggccttaagctctacagaaagaactcaatcttatatag
ctgtcatgaccagatatccggctaggcaggttatagcctact
gaattcagaatgaaggatacatttaccagaatgtttattggattgtgtgt
gtgtgtgcacactcgtgcgtgcatgtgtgtgtttgtgtggagagagagag
agagaagagagatagttgaatagttagatagaacatagaggaagtgcaaa
cttctcatttttggaaagtcagttatgtcaaatgatattttgctggggca
cacaggtgaaagaatgctttcctgaagcagacaggtgaaaggatgttttg
ctaaaacaaacacgtgaaaggattatgatattaagaaggagtataaatat
aacccaacagacagctggatggtattggtacgtcttgccattccttactg
gtcattgtttgttgtgacttcatagaaaagcaccaaaaaactcctggtgg
tgttctggcagtttcttgccacttctgcagactcaggtcaattggcagag
tgaagtggaagtttctggatatgtcagctgatagagactcttgtggaatg
ttgctaagacaaattcatgtggcatttgctgaagctagacccgagggagg
acacatggtgtttggagggaatataaataggactcaacagacagtgatgg
ctggcttacatagctagctttgcaatgctttgttggtattgtcttcatct
tcactgatcttcactttgttgagagaggcaagactgagaacttcatctgg
catccctgctggtccaggtcactcctgctgattcatgtggattcattgga
ggcctggctgtttctgctgggttgtgccactgctgctgattcgtgtttgc
tatcctgacgctactgaactggactgctgatattctgacaattgcagatt
gaaatcaccccaaggaactacttctaaatagcatacaacagagtctttgc
agcttcttctgaatttgacccgctgttgcagaattgtgaatggcgagtga
tcaagctgctgctgccgctgatatggactgagctgctgatagcctgacaa
cacagattgatttgctcaaagactttttctaaataagtcacttcccctgt
atctaatacattctttcacgatattctggtgagtggtgggctaacggaag
ttcaagcatcgtagatccttatacgtaggttggaagtcctaggcttacac
ttgcacaaataagtgactgtgaatctcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12203558_12204506
seq2: B6Ng01-266M17.b_49_994

seq1  GAATTCTCACTCATGGGTGGAGGAAAGACAACTGCATAATACGAAACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTCATGGGTGGAGGAAAGACAACTGCATAATACGAAACAAG  50

seq1  GCCTCTGGTGTTGTACTTTGGGAAACACAAAGCACGTTCCAGTATGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGGTGTTGTACTTTGGGAAACACAAAGCACGTTCCAGTATGAGTT  100

seq1  ATTTCCTTATCCAGAAGAGGGAGACTGTGCTGGGGAGAGTGAAGAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTATCCAGAAGAGGGAGACTGTGCTGGGGAGAGTGAAGAGTAGC  150

seq1  TCAGCATGGATTCCCAGAAGACAGACAAGCATTCAGTCTGATTTAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGGATTCCCAGAAGACAGACAAGCATTCAGTCTGATTTAGGGAA  200

seq1  ACAAGTGTCACTGGACTAAGGGTTCTGTTTTCCCTGCTCACTCTTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGTCACTGGACTAAGGGTTCTGTTTTCCCTGCTCACTCTTTCAGA  250

seq1  GCATAGCAAATTATTTCAAGGAAACTGGAGAATATGCGGTAGATATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCAAATTATTTCAAGGAAACTGGAGAATATGCGGTAGATATGTAT  300

seq1  GGTGGATTAATATTTTCCAAATATGGCCAACTCCTACTTCAAGAGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGATTAATATTTTCCAAATATGGCCAACTCCTACTTCAAGAGATGGA  350

seq1  ATCTTCCTTCTCCATGACCCTTTGCTTTCAAAGAATGCAGTTCTGTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTTCTCCATGACCCTTTGCTTTCAAAGAATGCAGTTCTGTCAAT  400

seq1  GGAGGAAGGGGAATAAAGGAAAAGGAAGCATTAAAAGGAGGTAGACAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGGGGAATAAAGGAAAAGGAAGCATTAAAAGGAGGTAGACAAGC  450

seq1  CAAAGAAGTGAGAACTCATTCTAAAGACCTTCTAAAAAGTCAGGGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGTGAGAACTCATTCTAAAGACCTTCTAAAAAGTCAGGGGGAAA  500

seq1  CCTACTTCAGAAGCTCCCAAAAATGTTAACATGTATTAAAAGAGTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTCAGAAGCTCCCAAAAATGTTAACATGTATTAAAAGAGTTTAAT  550

seq1  GGAGTTGACCTATGATGAGCAACAGTGCCCCTACTGGACACCACAGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGACCTATGATGAGCAACAGTGCCCCTACTGGACACCACAGGCTA  600

seq1  AGAGATTAAAAAGTCCAGTACCAAAGAAGGGCTGTCTCTATTAGATCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTAAAAAGTCCAGTACCAAAGAAGGGCTGTCTCTATTAGATCCCA  650

seq1  TAGATAGCCAAGTACGTGGTGTACAGCCATAAAACACCACATACTTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCAAGTACGTGGTGTACAGCCATAAAACACCACATACTTGAGT  700

seq1  CATAGAACACAAAAATTCAAATTGGCACTAACCAGAAAGCTTATTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAACACAAAAATTCAAATTGGCACTAACCAGAAAGCTTATTAAAAC  750

seq1  TAGCTAACTGAAAGGTGCTATGCATACTATCAGAGAAGAAACAGAATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAACTGAAAGGTGCTATGCATACTATCAGAGAAGAAACAGAATCAT  800

seq1  CTATCTTATTCAACTGTGAATCCTTCAAGATATAATAATGACTTGCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTATTCAACTGTGAATCCTTCAAGATATAATAATGACTTGCCTGG  850

seq1  CAAGCTATGCCTACTGGCGAAATGGTGGCAGGAATATTTTAGAAGAAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTATGCCTACTGGCGAAATGGTGGCAGGAATATTTTAGAAGAAACC  900

seq1  AACTTTCTTATTGGCCTTAAGGCTCTACAAGAAAGAACTCAAATCTTAT  949
      |||||||||||||||||||| ||||||| ||||||||||| ||||||||
seq2  AACTTTCTTATTGGCCTTAA-GCTCTAC-AGAAAGAACTC-AATCTTAT  946