BAC Information

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BAC

Clone NameB6Ng01-266M24
Chromosome14 (Build37)
Map Location 102,272,265 - 102,273,444
singlet/doubletsinglet
Overlap geneLmo7
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC100043795, LOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266M24.bB6Ng01-266M24.g
ACCGA070113GA070114
length1,1991,159
definitionB6Ng01-266M24.b B6Ng01-266M24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgctaaaaccatctggacctgagccttttctgtttgggagac
gtttaatgactgcttctatttccttagggattataggactatttaaatag
tttgcctaatcttgattcaactttggtacatagtatctgtctagaaaaat
catccatttcatttagattctccaattttgtggagtacaggcttttgaag
taagacctaatgattttttttgaactccctcagtatccgttgttatgtct
cccttttcattactgattctgtttatttggatacatctctctgccttata
gttagtttggctaagggtttgtctgtcttattgatttcctcaaagaatct
gctcttggttttactgattttttttgtatgttttcattgtttctaataga
ttgatttcagccctgagttgtttatttcctgctgttgactcctcttgggt
atgtttgcttcttttgtttctagagctctcaggtgtaattttaagatgct
agtatgagaaatctattatttctttatgaaggcacttaggctatgaattt
tcttcttagcattgctttcattgagtcccataagtttggatatgtggtgc
cttcactttgattgaattccagaaagtcttcaatttctctttttgttttt
ttctcttaccctgagatcattgagtggagagttgttcaatatccattagt
gtgtaggctttctgctgtttctgttgttgttgaagtcctgccttcatctg
tgatggtctggtaggatacaaggagttatttcaactttcttgtctgtgtt
gaggcttgctttgtgaccaagtatatagtcaattttggagaaggttccat
gaggtgctgtgaagaaagtatattcttctgggtgtgagtgaaacgttcta
tagatagctgttaggtccatttgatgcataacctctgtagtttcattgtt
tctctgtttagtttctgtctgatgacctgtccattggtgagagtgtgtgt
tgaaatctcacactaatatgtggggtcattgtgtaatataagctttacta
tgttctttacaaatatgtgtggtgtcctttgttggggccatagatgtcag
aaattggaaacttcactctggtgactacttgatgacataaagtgcctccg
atctcttaatactttggatggaagcctattttatagactatcttcagac
gaattcctgacattatgggtttcagtgataggaagctaatttggctggcc
catgtgtgtctttgtgttctggagcacgttgtaaatgctcacacttagaa
aggaatgtaaagtgaagggccagaaagcaaggtcactgctattggatctg
tcacggaatagcattgccttgcttatcattataaaaagtcagagggtgaa
ggactggaaatatttatttcaagctattgaaaggaggtgaggttttcaca
agggctctgtgattcctgatacccaagcgtgcttttgataaaagtgggac
cactttgagaaccatatgtcggtgagactacacattcattgtactttcgt
actttagataatttactatttgaagtgatacggcagtcaccattagaatt
atgggccacgagttcacaaccatttctagtgatattcctcggttaacaat
tcccgaaacagaattttattcagttctacaagatgattttcttttagttg
acgagataaattataacctgagcagtgcagctgtgaagtttctccagatt
actttttttttttttttgaagtatagcacccaaacagaaagatatatgtt
aactcaaagatcaactcccaagggctcaggaaatgataaagtacttgccc
tgaaatcaagagggtttgcgtttgatcccagaacccatcttaagaaatga
cccacaagctgctaaatgtacaggtcgaagatttcttaggaggctcacac
agttcgatagccagtttatggctcagaattcaaattctcagcctcagaga
ggcctggctccaggccgtgactctcccatgctctaccccaagggtaccaa
ctattcttctttgcttgttttagtagttttatattagcctatccacatta
cctgtattcttcttttctcatggtttgtgagacggacataccctagaata
aagttacgggctgtttggtcccatggctcctgtgttcatctgtgtagcta
tcccataataacatagaaaggctcctgactatgactttttgtcaacgatg
aaaaaaaacaacagcatacaaactgttctaagcctgttactggactgatt
gactgctatgccccttggcttagttaagtaatgtctacaggtggaatccg
agtgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102272265_102273444
seq2: B6Ng01-266M24.g_67_1225

seq1  GAATTCCTGACATTATGGGTTTCAGTGATAGGAAGCTAATTTGGCTGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACATTATGGGTTTCAGTGATAGGAAGCTAATTTGGCTGGCC  50

seq1  CATGTGTGTCTTTGTGTTCTGGAGCACGTTGTAAATGCTCACACTTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTCTTTGTGTTCTGGAGCACGTTGTAAATGCTCACACTTAGAA  100

seq1  AGGAATGTAAAGTGAAGGGCCAGAAAGCAAGGTCACTGCTATTGGATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGTAAAGTGAAGGGCCAGAAAGCAAGGTCACTGCTATTGGATCTG  150

seq1  TCACGGAATAGCATTGCCTTGCTTATCATTATAAAAAGTCAGAGGGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAATAGCATTGCCTTGCTTATCATTATAAAAAGTCAGAGGGTGAA  200

seq1  GGACTGGAAATATTTATTTCAAGCTATTGAAAGGAGGTGAGGTTTTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGAAATATTTATTTCAAGCTATTGAAAGGAGGTGAGGTTTTCACA  250

seq1  AGGGCTCTGTGATTCCTGATACCCAAGCGTGCTTTTGATAAAAGTGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTGTGATTCCTGATACCCAAGCGTGCTTTTGATAAAAGTGGGAC  300

seq1  CACTTTGAGAACCATATGTCGGTGAGACTACACATTCATTGTACTTTCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGAGAACCATATGTCGGTGAGACTACACATTCATTGTACTTTCGT  350

seq1  ACTTTAGATAATTTACTATTTGAAGTGATACGGCAGTCACCATTAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGATAATTTACTATTTGAAGTGATACGGCAGTCACCATTAGAATT  400

seq1  ATGGGCCACGAGTTCACAACCATTTCTAGTGATATTCCTCGGTTAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCACGAGTTCACAACCATTTCTAGTGATATTCCTCGGTTAACAAT  450

seq1  TCCCGAAACAGAATTTTATTCAGTTCTACAAGATGATTTTCTTTTAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAACAGAATTTTATTCAGTTCTACAAGATGATTTTCTTTTAGTTG  500

seq1  ACGAGATAAATTATAACCTGAGCAGTGCAGCTGTGAAGTTTCTCCAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGATAAATTATAACCTGAGCAGTGCAGCTGTGAAGTTTCTCCAGATT  550

seq1  ACTTTTTTTTTTTTTTTGAAGTATAGCACCCAAACAGAAAGATATATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTTTTTTTGAAGTATAGCACCCAAACAGAAAGATATATGTT  600

seq1  AACTCAAAGATCAACTCCCAAGGGCTCAGGAAATGATAAAGTACTTGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAAGATCAACTCCCAAGGGCTCAGGAAATGATAAAGTACTTGCCC  650

seq1  TGAAATCAAGAGGGTTTGCGTTTGATCCCAGAACCCATCTTAAGAAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAAGAGGGTTTGCGTTTGATCCCAGAACCCATCTTAAGAAATGA  700

seq1  CCCACAAGCTGCTAAATGTACAGGTCGAAGATTTCTTAGGAGGCTCACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAGCTGCTAAATGTACAGGTCGAAGATTTCTTAGGAGGCTCACAC  750

seq1  AGTTCGATAGCCAGTTTATGGCTCAGAATTCAAATTCTCAGCCTCAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGATAGCCAGTTTATGGCTCAGAATTCAAATTCTCAGCCTCAGAGA  800

seq1  GGCCTGGCTCCAGGCCGTGACTCTCCCATGCTCTACCCCAAGGGTACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCTCCAGGCCGTGACTCTCCCATGCTCTACCCCAAGGGTACCAA  850

seq1  CTATTCTTCTTTGCTTGTTTTAGTAGTTTTATATTAGCCTATCCACATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTCTTTGCTTGTTTTAGTAGTTTTATATTAGCCTATCCACATTA  900

seq1  CCTGTATTCTTCTTTTCTCATGGTTTGTGAGACGGAACCATACCCTAGAA  950
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  CCTGTATTCTTCTTTTCTCATGGTTTGTGAGACGGA--CATACCCTAGAA  948

seq1  TAAAGTTACGGGCTGTTTTGTCCCATGGCTCCCTGGTGTTCATTCTGTGT  1000
      |||||||||||||||||| |||||||||||||   ||||||| |||||||
seq2  TAAAGTTACGGGCTGTTTGGTCCCATGGCTCC--TGTGTTCA-TCTGTGT  995

seq1  AGCTATCCCATAATAACATAGAAAGGCTCCTGACTATGAC-TTTTGTCAA  1049
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGCTATCCCATAATAACATAGAAAGGCTCCTGACTATGACTTTTTGTCAA  1045

seq1  ACAGATGAAAAAAAAAAAACAACAAACCATACAAAACTGTTCTTAGGCTG  1099
         ||||    ||||||||||||  | ||||| |||||||||| || |||
seq2  --CGATG----AAAAAAAACAAC--AGCATAC-AAACTGTTCTAAGCCTG  1086

seq1  TACCTGGAACTGGGTTGACTGGGCTATGGCCTGTGGGCTTTAGTTTAAGT  1149
      |  |||| ||| | ||||||  |||||| ||  |||   |||| ||||||
seq2  TTACTGG-ACT-GATTGACT--GCTATGCCCCTTGG--CTTAG-TTAAGT  1129

seq1  AGATG-CTACCAAGTGGGATCCGAGTGAATGG  1180
      | ||| ||| || |||| ||||||||||||||
seq2  A-ATGTCTA-CAGGTGGAATCCGAGTGAATGG  1159