BAC Information

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BAC

Clone NameB6Ng01-267C24
Chromosome14 (Build37)
Map Location 11,904,813 - 12,087,978
singlet/doubletdoublet
Overlap geneFhit, LOC667030, EG382843
Upstream geneLOC100041974
Downstream geneLOC100042427, LOC667059, LOC100041996, Ptprg, LOC100042441
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267C24.bB6Ng01-267C24.g
ACCGA070387GA070388
length9801,086
definitionB6Ng01-267C24.b B6Ng01-267C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,904,813 - 11,905,416)(12,086,879 - 12,087,978)
sequence
gaattctttccagatttaaagttcagtgatgtataaatactaaacatgct
cttacaaaatataagagggaaagtaaacaagtaaaattaaaactattcaa
aaccacccttctggtaggcgccaggcaccaggtcaccttgggcgtggagt
cggcagacacccccaaggtcccttgaggactctccatgtgctcttaggac
ctctgctgagtggaacacaacttctgttccaatccaattgcacgggacct
gagacagcattagggaagcagaaaaccggcctgaccagggttgcaagtcc
cttcttgttggcaccagtacctggtcaccttgtgcgcagagttggtggac
accaccatggtccctagaggactctccatgagatcttaggaccactgacc
agacagctccatgctcctcaaaggagactacacttccaggcactgtaaca
cgcccaggatcattgacaacaggatcccaggataaaaggagcttggtcaa
accagtattttaaggtctcagaggaacttgactgctaagaactctgacaa
acccagaatctcaggttcacaggagcccacaagcaaagaatcacagagaa
tgatggactctgaggagttttgaatcaactgggattataggaaggacagg
ctccaatcagatatattgaggacaacaaatacttgagataatcagatggc
aggaggcaagcataagaaagaagcaacagaaaccaaggatacttagcatc
atcagaaccaaactctcccaccataacaagtcctgggagacaccatcaca
ccagaaaagcaagacatgggatctaaagtcacttcttataatgatgatgg
aggacattaacaaggaaatacaggaagacacaggtaaacagctagaagcc
tttaaaaggaaacacaatagatgtgagcatcagcaacaaaatacaagaga
tggaagagagaatctcaggtacagaatatt

gaattcagagcatacaagctggaggctgacccttaacgctttcagcacta
agggtgcagaagaaaccataatttgtgtcttgatgagcctgcttgctttg
ttattcaatggctaaacgtaggcaggagaacaaaggcttacatctattac
agttccttgtttttctttttttcttttttttgttttgtttttcttttttc
tttttctttttgttttctgtttttgttttgtttttttaaatctctcacaa
aaggcataacccaagaacatctgaaggagttgagagaaaatttttcctgt
atgtaaatatgctctggtttaatctggaaaatgtactgatgctgtcttgc
cattacttatatataagctgactttctgtatgaggtggccaaggtgcaac
attgagatatagaatggatggagtgtaatagccagtctcagctgctagac
tttgtgtcagtgccatctctgctgaccactgggcagtgttgcggatggcc
gttctgcactttgctttacctcctcagaagcagtgcctgccctgagctca
acaagactgagacagagaaaaccaaaacaaacatctctgtttctcctaag
ttttccatggctgtataaggtacttttctcactgctgtggtcagttatcc
cagataaagcatcttgatggaggaagggtttattccagctcattgataat
acaacacaccatgcatgaaaggtgggtggctggtcaagttgagaccacag
tcaggaagcagacaataacttgcttacttctcatttttgttcagtcaggg
atctaagcccaagaaaaggtgctgcctgtatttggctgggcccttaccat
ctcatttaacccaatctagtatctccctcaagacttgagttgtttcctag
atgattctaaatcctatcaagttgacaatattacccatcatactggggag
atagatataaaaataaatgtatgactgtgtaacagtctttagatcatgct
aaaagcaagatatgctgctatccattatttgatgaaatgatatcataggt
gttctgtactaatctggctccctctgccaatgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11904813_11905416
seq2: B6Ng01-267C24.b_44_647

seq1  GAATTCTTTCCAGATTTAAAGTTCAGTGATGTATAAATACTAAACATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGATTTAAAGTTCAGTGATGTATAAATACTAAACATGCT  50

seq1  CTTACAAAATATAAGAGGGAAAGTAAACAAGTAAAATTAAAACTATTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAAATATAAGAGGGAAAGTAAACAAGTAAAATTAAAACTATTCAA  100

seq1  AACCACCCTTCTGGTAGGCGCCAGGCACCAGGTCACCTTGGGCGTGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCTTCTGGTAGGCGCCAGGCACCAGGTCACCTTGGGCGTGGAGT  150

seq1  CGGCAGACACCCCCAAGGTCCCTTGAGGACTCTCCATGTGCTCTTAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGACACCCCCAAGGTCCCTTGAGGACTCTCCATGTGCTCTTAGGAC  200

seq1  CTCTGCTGAGTGGAACACAACTTCTGTTCCAATCCAATTGCACGGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGAGTGGAACACAACTTCTGTTCCAATCCAATTGCACGGGACCT  250

seq1  GAGACAGCATTAGGGAAGCAGAAAACCGGCCTGACCAGGGTTGCAAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCATTAGGGAAGCAGAAAACCGGCCTGACCAGGGTTGCAAGTCC  300

seq1  CTTCTTGTTGGCACCAGTACCTGGTCACCTTGTGCGCAGAGTTGGTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTTGGCACCAGTACCTGGTCACCTTGTGCGCAGAGTTGGTGGAC  350

seq1  ACCACCATGGTCCCTAGAGGACTCTCCATGAGATCTTAGGACCACTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATGGTCCCTAGAGGACTCTCCATGAGATCTTAGGACCACTGACC  400

seq1  AGACAGCTCCATGCTCCTCAAAGGAGACTACACTTCCAGGCACTGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTCCATGCTCCTCAAAGGAGACTACACTTCCAGGCACTGTAACA  450

seq1  CGCCCAGGATCATTGACAACAGGATCCCAGGATAAAAGGAGCTTGGTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCAGGATCATTGACAACAGGATCCCAGGATAAAAGGAGCTTGGTCAA  500

seq1  ACCAGTATTTTAAGGTCTCAGAGGAACTTGACTGCTAAGAACTCTGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTATTTTAAGGTCTCAGAGGAACTTGACTGCTAAGAACTCTGACAA  550

seq1  ACCCAGAATCTCAGGTTCACAGGAGCCCACAAGCAAAGAATCACAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAATCTCAGGTTCACAGGAGCCCACAAGCAAAGAATCACAGAGAA  600

seq1  TGAT  604
      ||||
seq2  TGAT  604


seq1: chr14_12086879_12087978
seq2: B6Ng01-267C24.g_68_1153 (reverse)

seq1  TTTTCATTTGCCAGAGGGAGGCAGATAAGTACAG-ACA-CTATGAATATT  48
      |||||| ||| ||||||||| ||||| ||||||| ||| ||||| ||| |
seq2  TTTTCA-TTGGCAGAGGGAGCCAGATTAGTACAGAACACCTATG-ATA-T  47

seq1  CATTTCATCAAATTAAATGGATAGCAGCAATTAATCTTGCCTTTTAGCAT  98
      |||||||||||||  ||||||||||||||    |||||| ||||||||| 
seq2  CATTTCATCAAAT--AATGGATAGCAGCA---TATCTTG-CTTTTAGCA-  90

seq1  TGATCCTAAAGAACTGTTAACACAGTTCATACATTTATTTTTATTATCTA  148
      |||| |||||| |||||| |||||| ||||||||||||||||| ||||||
seq2  TGAT-CTAAAG-ACTGTT-ACACAG-TCATACATTTATTTTTA-TATCTA  135

seq1  TCTTCCCCAGTATGATGGTTAATATTGTCAACTTGATAGGATTTAGAATC  198
      || ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TC-TCCCCAGTATGATGGGTAATATTGTCAACTTGATAGGATTTAGAATC  184

seq1  ATCTAGGAAACAACTCAAGTCTTTGAGGGAGATACTAGATTGGGTTAAAT  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCTAGGAAACAACTCAAGTC-TTGAGGGAGATACTAGATTGGGTTAAAT  233

seq1  GAGATGGTAA-GGCCCAGCCAAATACAGGCAGCACCTTTTCTTGGGCTTA  297
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGTAAGGGCCCAGCCAAATACAGGCAGCACCTTTTCTTGGGCTTA  283

seq1  GATCCCTGACTGAACAAAAATGAGAAGTAAGCAAGTTATTGTCTGCTTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTGACTGAACAAAAATGAGAAGTAAGCAAGTTATTGTCTGCTTCC  333

seq1  TGACTGTGGTCTCAACTTGACCAGCCACCCACCTTTCATGCATGGTGTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGGTCTCAACTTGACCAGCCACCCACCTTTCATGCATGGTGTGT  383

seq1  TGTATTATCAATGAGCTGGAATAAACCCTTCCTCCATCAAGATGCTTTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATCAATGAGCTGGAATAAACCCTTCCTCCATCAAGATGCTTTAT  433

seq1  CTGGGATAACTGACCACAGCAGTGAGAAAAGTACCTTATACAGCCATGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATAACTGACCACAGCAGTGAGAAAAGTACCTTATACAGCCATGGA  483

seq1  AAACTTAGGAGAAACAGAGATGTTTGTTTTGGTTTTCTCTGTCTCAGTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGGAGAAACAGAGATGTTTGTTTTGGTTTTCTCTGTCTCAGTCT  533

seq1  TGTTGAGCTCAGGGCAGGCACTGCTTCTGAGGAGGTAAAGCAAAGTGCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCTCAGGGCAGGCACTGCTTCTGAGGAGGTAAAGCAAAGTGCAG  583

seq1  AACGGCCATCCGCAACACTGCCCAGTGGTCAGCAGAGATGGCACTGACAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCCATCCGCAACACTGCCCAGTGGTCAGCAGAGATGGCACTGACAC  633

seq1  AAAGTCTAGCAGCTGAGACTGGCTATTACACTCCATCCATTCTATATCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTAGCAGCTGAGACTGGCTATTACACTCCATCCATTCTATATCTC  683

seq1  AATGTTGCACCTTGGCCACCTCATACAGAAAGTCAGCTTATATATAAGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCACCTTGGCCACCTCATACAGAAAGTCAGCTTATATATAAGTA  733

seq1  ATGGCAAGACAGCATCAGTACATTTTCCAGATTAAACCAGAGCATATTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGACAGCATCAGTACATTTTCCAGATTAAACCAGAGCATATTTA  783

seq1  CATACAGGAAAAATTTTCTCTCAACTCCTTCAGATGTTCTTGGGTTATGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGAAAAATTTTCTCTCAACTCCTTCAGATGTTCTTGGGTTATGC  833

seq1  CTTTTGTGAGAGATTTAAAAAAACAAAACAAAAACAGAAAACAAAAAGAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGAGAGATTTAAAAAAACAAAACAAAAACAGAAAACAAAAAGAA  883

seq1  AAAGAAAAAAGAAAAACAAAACAAAAAAAAGAAAAAAAGAAAAACAAGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAGAAAAACAAAACAAAAAAAAGAAAAAAAGAAAAACAAGGA  933

seq1  ACTGTAATAGATGTAAGCCTTTGTTCTCCTGCCTACGTTTAGCCATTGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAATAGATGTAAGCCTTTGTTCTCCTGCCTACGTTTAGCCATTGAA  983

seq1  TAACAAAGCAAGCAGGCTCATCAAGACACAAATTATGGTTTCTTCTGCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGCAAGCAGGCTCATCAAGACACAAATTATGGTTTCTTCTGCAC  1033

seq1  CCTTAGTGCTGAAAGCGTTAAGGGTCAGCCTCCAGCTTGTATGCTCTGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTGCTGAAAGCGTTAAGGGTCAGCCTCCAGCTTGTATGCTCTGAA  1083

seq1  TTC  1100
      |||
seq2  TTC  1086


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