BAC Information

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BAC

Clone NameB6Ng01-269D21
Chromosome14 (Build37)
Map Location 111,356,815 - 111,357,972
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772
Downstream geneEG622052, LOC100043491, LOC100043494, Slitrk5, LOC100043501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269D21.bB6Ng01-269D21.g
ACCGA071893GA071894
length1,0531,187
definitionB6Ng01-269D21.b B6Ng01-269D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcatcagaatttaaaagtttcttttataacaggttgacttca
tattggatcacacttaaaaatttttatttttcagtgctagtagcttttac
tttaatattggttttagattcttattcgactgtgaaagagctatgtgtct
ttaatcataattttaatacatttttattttttattaaagtaacctatgtt
atttgtttaatatttatgactgaggctttaatggtgttccatgggtgtta
gcttctctaagatttaagatgtttttctattgatagggtccctttgattg
atattcattttgaactattggtaataacgatagtaatacaatactttatg
ctgatgctggctgcaagattttatttcttaaattcaatagcatctgctat
gatgattatccattcaaaatgttattattacactatataatcattgtagt
atatcattatcttaaaatataatatatagaaatctcccctaactatagac
agaaacatgttccactaagtagtgatgaatgtgataaattatgccaggat
tcatatttaaaaagtatagactgctttttttggtgaactcaatggactac
ctgaaattggttagaaaataaaacaaaaactgtttccttaagactatact
cacaatgagtattttctgtattgtaggtataaaactgaaatatactagaa
cattattaaaaatgttaaatatattttgtatttcctaaaaacatgcaaat
tcaagattatatttcatgttaaaaatgtgataagcagttggcaaattacc
tataaaagtgagaaaaaaatggtctcataaactaagattttattttgcta
actaagattgtattatttgtgtatgtatgtatttgagcatacatgggttt
gaaggctcaaagagaacattttggcaattttttggatactaacttccact
tcttcttttcttcttcttccttcctctccttcttcttcttcttcttctct
tcttcttcttcttctcttctcttcttcttctcttctctctctctctctct
cct

gaattctttgttcagatgtgagccccattttttaatggagttattcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcacaatctgttggtggtct
ttttgtcttattgatggcatcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctgattttatgtgaagttccttga
tccacttagatttgaccctagtccaaggagataagtatggatcaattcga
attcttctaggtgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggtttttgctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgt
tctagttgtctgtctctataccagtaccatgctgtttttatcacaattac
tctgtagtaaagctttaggtcaggcatggtgattccactagaggttcttt
tatacttgagaagactttttgcaatcctaggttttttgttattctagatg
aatttgcaaattgttccttctaattcattgaagaattgaattggaatttt
gatggggatcgaattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacaccaagatattttatattat
ttgtgaaatttgagaagggtgttgtttccctaatttctttctcagcctgt
ttattcttttgtatagagaaggccattgacttgtttgagtttattttata
ttccagctacttcaccgagcctgtttatcagtttaggagttctctggttg
atttaagggtcacttatatatataactatcgatcatctgcagagtgcaat
ttgacgttccttctttttccaaatttgttatcttacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111356815_111357972
seq2: B6Ng01-269D21.b_44_1096

seq1  GAATTCCATCATCAGAATTTAAAAGTTTCTTTTATAACAGGTTGACTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCATCAGAATTTAAAAGTTTCTTTTATAACAGGTTGACTTCA  50

seq1  TATTGGATCACACTTAAAAATTTTTATTTTTCAGTGCTAGTAGCTTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATCACACTTAAAAATTTTTATTTTTCAGTGCTAGTAGCTTTTAC  100

seq1  TTTAATATTGGTTTTAGATTCTTATTCGACTGTGAAAGAGCTATGTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTGGTTTTAGATTCTTATTCGACTGTGAAAGAGCTATGTGTCT  150

seq1  TTAATCATAATTTTAATACATTTTTATTTTTTATTAAAGTAACCTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATAATTTTAATACATTTTTATTTTTTATTAAAGTAACCTATGTT  200

seq1  ATTTGTTTAATATTTATGACTGAGGCTTTAATGGTGTTCCATGGGTGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTAATATTTATGACTGAGGCTTTAATGGTGTTCCATGGGTGTTA  250

seq1  GCTTCTCTAAGATTTAAGATGTTTTTCTATTGATAGGGTCCCTTTGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTAAGATTTAAGATGTTTTTCTATTGATAGGGTCCCTTTGATTG  300

seq1  ATATTCATTTTGAACTATTGGTAATAACGATAGTAATACAATACTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATTTTGAACTATTGGTAATAACGATAGTAATACAATACTTTATG  350

seq1  CTGATGCTGGCTGCAAGATTTTATTTCTTAAATTCAATAGCATCTGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTGGCTGCAAGATTTTATTTCTTAAATTCAATAGCATCTGCTAT  400

seq1  GATGATTATCCATTCAAAATGTTATTATTACACTATATAATCATTGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTATCCATTCAAAATGTTATTATTACACTATATAATCATTGTAGT  450

seq1  ATATCATTATCTTAAAATATAATATATAGAAATCTCCCCTAACTATAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTATCTTAAAATATAATATATAGAAATCTCCCCTAACTATAGAC  500

seq1  AGAAACATGTTCCACTAAGTAGTGATGAATGTGATAAATTATGCCAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATGTTCCACTAAGTAGTGATGAATGTGATAAATTATGCCAGGAT  550

seq1  TCATATTTAAAAAGTATAGACTGCTTTTTTTGGTGAACTCAATGGACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTAAAAAGTATAGACTGCTTTTTTTGGTGAACTCAATGGACTAC  600

seq1  CTGAAATTGGTTAGAAAATAAAACAAAAACTGTTTCCTTAAGACTATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTGGTTAGAAAATAAAACAAAAACTGTTTCCTTAAGACTATACT  650

seq1  CACAATGAGTATTTTCTGTATTGTAGGTATAAAACTGAAATATACTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAGTATTTTCTGTATTGTAGGTATAAAACTGAAATATACTAGAA  700

seq1  CATTATTAAAAATGTTAAATATATTTTGTATTTCCTAAAAACATGCAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTAAAAATGTTAAATATATTTTGTATTTCCTAAAAACATGCAAAT  750

seq1  TCAAGATTATATTTCATGTTAAAAATGTGATAAGCAGTTGGCAAATTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTATATTTCATGTTAAAAATGTGATAAGCAGTTGGCAAATTACC  800

seq1  TATAAAAGTGAGAAAAAAATGGTCTCATAAACTAAGATTTTATTTTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGTGAGAAAAAAATGGTCTCATAAACTAAGATTTTATTTTGCTA  850

seq1  ACTAAGATTGTATTATTTGTGTATGTATGTATTTGAGCATACATGGGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATTGTATTATTTGTGTATGTATGTATTTGAGCATACATGGGTTT  900

seq1  GAAGGCTCAAAGAGAACATTTTGGCAATTTTTTGGATACTAACTTCCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCAAAGAGAACATTTTGGCAATTTTTTGGATACTAACTTCCACT  950

seq1  TCTTTCTTTTCTTCCTTCCTTCCTTCCT-TCCTTCCTTTCTTTCTTTCTT  999
      || |||||||||||  | |||||||||| ||||||  ||| |||||   |
seq2  TC-TTCTTTTCTTC--TTCTTCCTTCCTCTCCTTC--TTC-TTCTT--CT  992

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTC  1049
      ||||   |||||   |||||  | ||||   |||||  | |||| || ||
seq2  TCTTCTCTTCTT--CTTCTTCTTCTCTTCTCTTCTTCTTCTCTT-CTCTC  1039

seq1  TTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT  1099
      | ||| ||| || |                                    
seq2  TCTCTCTCTCTCCT------------------------------------  1053

seq1  TCTTTCTTTCCTTCTTTCTTTCTTTCTTCTCTCTCTTTCTCTCTCTTTCT  1149
                                                        
seq2  --------------------------------------------------  1053

seq1  CTCTCTCCT  1158
               
seq2  ---------  1053


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