BAC Information

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BAC

Clone NameB6Ng01-269F19
Chromosome14 (Build37)
Map Location 82,184,507 - 82,320,029
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269F19.bB6Ng01-269F19.g
ACCGA071981GA071982
length1,1341,173
definitionB6Ng01-269F19.b B6Ng01-269F19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,184,507 - 82,185,645)(82,318,844 - 82,320,029)
sequence
gaattctttctataggacaaagcaccaaatgttgggaccatgaatccaaa
gcaaagtagttattttgaaggagcaggaattaagtttgacaggcttaata
tttgaaaaaaaatatttccccacatccccccccaatatattgaagcaaat
gctacaggaaaattaaggtatatgtagaattcaaagcaatcacttaatta
gaaatgaacacacaggtgacaactgtacacagattttaatatagacatct
ctacatagaagaagacacatttgattcaggagatcactctacctagaaat
gctggcaaagtgggagagggatagagaaagtgaatagacattgccatgtg
tttcaataggtggtgtgtgattgagagaaaacaagttgtacataagaaga
gggaaacttcctcaaaatctcagatatgggtagtagtatcatggagaaac
agatatctcaatttctaaagaagttcagcaagctagctagagtataaaca
gtttctggtgagtgggaaatgaaaagaaaatgtttgtgtaagtagtaggt
taagattttaaaggatgatgcttaattcctttaactcttcctccctttct
gaaatcaagaacataaacaaggtaatggaagctactatcactgtacagca
tggtgagcatttagaggaatgtcctgacttattagcttacctgcaagttg
aggttgttagtgtgaatgctttattgataagggagataatcttatattta
atatacttgttaaaatgaaaatattcaggaatatataagttgtaatataa
aacactaataatatagaatgatactgctaatattctaaaagaattgtgga
tgactgaatagtaaaatatagaccatctagttagatacctagtggttgag
aataacatttgcataaactctaatatactcacaacagatgcaaaacatac
ttggaaagatgttggagaaatgaaactgaccagacatttttttaactaac
taaatatggaagttgaaaattgaattattgcttagatatgtctgtatttt
ttataaaggtctatatctgcaattcatttaattattttcagtatataaag
aaaatattggtctcttgattaagtgtttatttct

gaattctgagcagttataatatctggagacaaataaaatatcagggaaat
aatatgaggttagaatatgaactcatgtatacaagattccctctttattc
aagatcaatgtttgcaaaacatggtttcctgggtcattactagctgagtg
attacagtgtgttccaggcagtaagggattgtgctttcaaattagtttga
agaagaagctgaatagtaagttgtatatttgcatactaaagactcagctt
caacttgaagtaaaaaagatatgtttatacttgcttaaatcagctttcta
caaacttgtttataacagaatttttcattagacatcatttttatagtgtg
gattattagtttcctacagtgaggaatgagtagaccatgaaaagtgttgt
attttagtgtgcataacttgcacttgcacatccatgtgtatatctttgca
tatttagtattttgactaacaacataatttggaagtcagagacaaaattt
ttagaggtataatatttcaatcctttgacaaaatccttcacgtgccactt
cttaagctaaaagctaaaatggggcatttcagaccaaaaaaggaatcatt
gcacataaatgaagtgaacagttaacctagacatccacaagaagccaagc
acgatgggaaagagtgtgtctctggaaatatatgggatttcaatgctact
gaaataattacaattaagatctttgatgggaattgaggacgtaaagatga
tacttttgcacaaagaagataacaaataatgccttacttttaaaaattaa
agattccagaaaggataaataataacagaaagaatgttcagaagagaaaa
aaaggaagattaacagtgtgaagacaatgtataaacaaataaatgaaagt
ccagtaagtgccaacagtaaggtgagtatactttgtgtattgatcagcac
atgatgaatataatccctcttattatctttgaacctttagcaatcagaaa
acaggacactaatgcatatcatgcctttgagtgcctctatactttaaata
gctgattagtatttttataattctgagattccacaacagtgaaattttgg
atctactcttaactactctgcaccttgtaaagttcaactccactcgatta
agcaacttgtgcctctcttttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82184507_82185645
seq2: B6Ng01-269F19.b_46_1179

seq1  GAATTCTTTCTATAGGACAAAGCACCAAATGTTGGGACCATGAATCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATAGGACAAAGCACCAAATGTTGGGACCATGAATCCAAA  50

seq1  GCAAAGTAGTTATTTTGAAGGAGCAGGAATTAAGTTTGACAGGCTTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTAGTTATTTTGAAGGAGCAGGAATTAAGTTTGACAGGCTTAATA  100

seq1  TTTGAAAAAAAATATTTCCCCACATCCCCCCCCAATATATTGAAGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAAAAATATTTCCCCACATCCCCCCCCAATATATTGAAGCAAAT  150

seq1  GCTACAGGAAAATTAAGGTATATGTAGAATTCAAAGCAATCACTTAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGGAAAATTAAGGTATATGTAGAATTCAAAGCAATCACTTAATTA  200

seq1  GAAATGAACACACAGGTGACAACTGTACACAGATTTTAATATAGACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAACACACAGGTGACAACTGTACACAGATTTTAATATAGACATCT  250

seq1  CTACATAGAAGAAGACACATTTGATTCAGGAGATCACTCTACCTAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGAAGAAGACACATTTGATTCAGGAGATCACTCTACCTAGAAAT  300

seq1  GCTGGCAAAGTGGGAGAGGGATAGAGAAAGTGAATAGACATTGCCATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAAGTGGGAGAGGGATAGAGAAAGTGAATAGACATTGCCATGTG  350

seq1  TTTCAATAGGTGGTGTGTGATTGAGAGAAAACAAGTTGTACATAAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAGGTGGTGTGTGATTGAGAGAAAACAAGTTGTACATAAGAAGA  400

seq1  GGGAAACTTCCTCAAAATCTCAGATATGGGTAGTAGTATCATGGAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTTCCTCAAAATCTCAGATATGGGTAGTAGTATCATGGAGAAAC  450

seq1  AGATATCTCAATTTCTAAAGAAGTTCAGCAAGCTAGCTAGAGTATAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTCAATTTCTAAAGAAGTTCAGCAAGCTAGCTAGAGTATAAACA  500

seq1  GTTTCTGGTGAGTGGGAAATGAAAAGAAAATGTTTGTGTAAGTAGTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGTGAGTGGGAAATGAAAAGAAAATGTTTGTGTAAGTAGTAGGT  550

seq1  TAAGATTTTAAAGGATGATGCTTAATTCCTTTAACTCTTCCTCCCTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTAAAGGATGATGCTTAATTCCTTTAACTCTTCCTCCCTTTCT  600

seq1  GAAATCAAGAACATAAACAAGGTAATGGAAGCTACTATCACTGTACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAAGAACATAAACAAGGTAATGGAAGCTACTATCACTGTACAGCA  650

seq1  TGGTGAGCATTTAGAGGAATGTCCTGACTTATTAGCTTACCTGCAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCATTTAGAGGAATGTCCTGACTTATTAGCTTACCTGCAAGTTG  700

seq1  AGGTTGTTAGTGTGAATGCTTTATTGATAAGGGAGATAATCTTATATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTAGTGTGAATGCTTTATTGATAAGGGAGATAATCTTATATTTA  750

seq1  ATATACTTGTTAAAATGAAAATATTCAGGAATATATAAGTTGTAATATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTGTTAAAATGAAAATATTCAGGAATATATAAGTTGTAATATAA  800

seq1  AACACTAATAATATAGAATGATACTGCTAATATTCTAAAAGAATTGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAATAATATAGAATGATACTGCTAATATTCTAAAAGAATTGTGGA  850

seq1  TGACTGAATAGTAAAATATAGACCATCTAGTTAGATACCTAGTGGTTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAATAGTAAAATATAGACCATCTAGTTAGATACCTAGTGGTTGAG  900

seq1  AATAACATTTGCATAAACTCTAATATACTCACAACAGATGCAAAACATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTTGCATAAACTCTAATATACTCACAACAGATGCAAAACATAC  950

seq1  TTGGAAAGATGTTGGAGAAATGAAACTGACCAGACA-TTTTTTAACTAAC  999
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGGAAAGATGTTGGAGAAATGAAACTGACCAGACATTTTTTTAACTAAC  1000

seq1  TAAATATGGAAGTTGAAAAATTGAA-TATGCTTTAGATATGTCTGTATTT  1048
      ||||||||||||||| ||||||||| |||   ||||||||||||||||||
seq2  TAAATATGGAAGTTG-AAAATTGAATTATTGCTTAGATATGTCTGTATTT  1049

seq1  TTTATTAAAAGTCTATAATCTGCAAATCATTTAATTATTTTCAGTATATA  1098
      |||| |||| |||||| |||||||| ||||||||||||||||||||||||
seq2  TTTA-TAAAGGTCTAT-ATCTGCAATTCATTTAATTATTTTCAGTATATA  1097

seq1  AAGAAAAATATGGTCTCCTTGAATAAGTGTTTAATTTTTCT  1139
      |||||||   |||||| ||||| ||||||||||   |||||
seq2  AAGAAAATATTGGTCT-CTTGATTAAGTGTTTA---TTTCT  1134


seq1: chr14_82318844_82320029
seq2: B6Ng01-269F19.g_69_1241 (reverse)

seq1  GGAAAAGAAAAAGAAGACACAAAGTTGGTTTAATCGAAGGTGAGTTTGAA  50
      ||||||||      || ||| ||||| | ||||||||  |||   |||||
seq2  GGAAAAGA-----GAGGCAC-AAGTT-GCTTAATCGA--GTGGAGTTGAA  41

seq1  TTTTTACAGAGGTGCAGAGTAGTGTAGGAGTAAGATC--AAAATTCACTG  98
        |||||| |||||||||||||| || |||| |||||  ||| |||||||
seq2  -CTTTACA-AGGTGCAGAGTAGT-TAAGAGT-AGATCCAAAATTTCACTG  87

seq1  TTGTGAATTCTCAAGGAATTAATAAAATACTAATCAAGCTATGTAAAGTA  148
      ||||| | |||||  ||||||  |||||||||||| |||||| |||||||
seq2  TTGTGGAATCTCA--GAATTATAAAAATACTAATC-AGCTATTTAAAGTA  134

seq1  TAGAGGCACTCAAAGGCATGATATGCATTAGTGTCCTTGTTTCTGATTGC  198
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  TAGAGGCACTCAAAGGCATGATATGCATTAGTGTCCTGTTTTCTGATTGC  184

seq1  TAAAGGGTTCAAAGATAAT-AGAGGGATTTATATTCATCATGTGCTGATC  247
      |||| |||||||||||||| ||||||| ||||||||||||||||||||||
seq2  TAAA-GGTTCAAAGATAATAAGAGGGA-TTATATTCATCATGTGCTGATC  232

seq1  AATACACAAAGTATACTCACCTTACTGTTGGCACTTACTGGACTTTCATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAAAGTATACTCACCTTACTGTTGGCACTTACTGGACTTTCATT  282

seq1  TATTTGTTTATACATTGTCTTCACACTGTTAATCTTCCTTTTTTTCTCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTATACATTGTCTTCACACTGTTAATCTTCCTTTTTTTCTCTT  332

seq1  CTGAACATTCTTTCTGTTATTATTTATCC-TTCTGGAATCTTTAATTTTT  396
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGAACATTCTTTCTGTTATTATTTATCCTTTCTGGAATCTTTAATTTTT  382

seq1  -AAAGTAAGGCATTATTTGTTATCTTCTTTGTGCAAAAGTATCATCTTTA  445
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGGCATTATTTGTTATCTTCTTTGTGCAAAAGTATCATCTTTA  432

seq1  CGTCCTCAATTCCCATCAAAGATCTTAATTGTAATTATTTCAGTAGCATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTCAATTCCCATCAAAGATCTTAATTGTAATTATTTCAGTAGCATT  482

seq1  GAAATCCCATATATTTCCAGAGACACACTCTTTCCCATCGTGCTTGGCTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCCATATATTTCCAGAGACACACTCTTTCCCATCGTGCTTGGCTT  532

seq1  CTTGTGGATGTCTAGGTTAACTGTTCACTTCATTTATGTGCAATGATTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGATGTCTAGGTTAACTGTTCACTTCATTTATGTGCAATGATTCC  582

seq1  TTTTTTGGTCTGAAATGCCCCATTTTAGCTTTTAGCTTAAGAAGTGGCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTCTGAAATGCCCCATTTTAGCTTTTAGCTTAAGAAGTGGCAC  632

seq1  GTGAAGGATTTTGTCAAAGGATTGAAATATTATACCTCTAAAAATTTTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGATTTTGTCAAAGGATTGAAATATTATACCTCTAAAAATTTTGT  682

seq1  CTCTGACTTCCAAATTATGTTGTTAGTCAAAATACTAAATATGCAAAGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTTCCAAATTATGTTGTTAGTCAAAATACTAAATATGCAAAGAT  732

seq1  ATACACATGGATGTGCAAGTGCAAGTTATGCACACTAAAATACAACACTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATGGATGTGCAAGTGCAAGTTATGCACACTAAAATACAACACTT  782

seq1  TTCATGGTCTACTCATTCCTCACTGTAGGAAACTAATAATCCACACTATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTCTACTCATTCCTCACTGTAGGAAACTAATAATCCACACTATA  832

seq1  AAAATGATGTCTAATGAAAAATTCTGTTATAAACAAGTTTGTAGAAAGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATGTCTAATGAAAAATTCTGTTATAAACAAGTTTGTAGAAAGCT  882

seq1  GATTTAAGCAAGTATAAACATATCTTTTTTACTTCAAGTTGAAGCTGAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGCAAGTATAAACATATCTTTTTTACTTCAAGTTGAAGCTGAGT  932

seq1  CTTTAGTATGCAAATATACAACTTACTATTCAGCTTCTTCTTCAAACTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTATGCAAATATACAACTTACTATTCAGCTTCTTCTTCAAACTAA  982

seq1  TTTGAAAGCACAATCCCTTACTGCCTGGAACACACTGTAATCACTCAGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGCACAATCCCTTACTGCCTGGAACACACTGTAATCACTCAGCT  1032

seq1  AGTAATGACCCAGGAAACCATGTTTTGCAAACATTGATCTTGAATAAAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGACCCAGGAAACCATGTTTTGCAAACATTGATCTTGAATAAAGA  1082

seq1  GGGAATCTTGTATACATGAGTTCATATTCTAACCTCATATTATTTCCCTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCTTGTATACATGAGTTCATATTCTAACCTCATATTATTTCCCTG  1132

seq1  ATATTTTATTTGTCTCCAGATATTATAACTGCTCAGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTTGTCTCCAGATATTATAACTGCTCAGAATTC  1173


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