BAC Information

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BAC

Clone NameB6Ng01-269H02
Chromosome14 (Build37)
Map Location 94,655,170 - 94,655,319
singlet/doubletsinglet
Overlap geneLOC100043356
Upstream genePcdh9
Downstream geneLOC100043783, LOC677613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269H02.bB6Ng01-269H02.g
ACCGA072041GA072042
length1,198569
definitionB6Ng01-269H02.b B6Ng01-269H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacagtgccttttgccttgcagaagctttgcaatttttt
gaggtcccatttgtggattcttgatcttacaggacaagccattgctgttc
tattaaggaatttttcccctttacccatatctttgagggtttttcctact
ttctcctctataggtttcagtgtctctgggaatagatgggagctgtaccc
aacatttacaaagacacaacttgggctgagcccaaagcatttactactcc
gttctaccaatctccaagcctaggcctgcatgtttctagcttccacacaa
cctagtcttctgcaagcccagaccttgaaggcttcagcttccagcctcca
tctgctaacctaggcctagaatgtttcagcctctgagacttgatgctgat
taaatttactctttttaatccatgtttttattagatattttctttattta
cattttaaatgttacctatgttcctggtttcctctctgaaaaccactctc
cctatcaccttccccctcaccctcctcaccaacgaaccaattcttacttt
ctggccctgcatttcccctacagtggggcatagaaccttcacaggaccaa
gggcttctcttctcattgatgaccaatgtgccaaactctgttacatatgc
aactagagccacaagtcccaccatgtcttttctttgattagtggtttagt
ctcagggagctctggaaatactggttagttaatattgttgttcctcctat
ggggatgcaaacccctttcagctccttggatacattctctggctccttca
ctggggaccctgtgctcagtcacatgaacacagagacccaagaatggata
ctttcaatcccttctagaatggagaacaaaatacccatggaaggagttac
aagagacaaagttgtgaacagtagactggaggaataactattccagagac
taacccgtacttggaatcatacatacatttcactaacctagacctatgtt
cagatgcacaaaagtcttgctgtaacgaggagcctgtgaatataatgc

gaattccaagtactggagaaagcaaataagaaggaaaggaaagaaaagac
aaagcaggagagttcataggtgttaaagaataagtctgctgcaggaggca
ctgagtatatggcaaaataatgaataatcagaaagctggttattcattat
tttgccataaagttacagagacaaagtttggagctgagacaaaaggatgg
accatctagagactgccataccgagggatccatcccataatcagcctcca
aatgcattgcatacactagcaagtttttactgaaaggacccggatatagc
tgcctcttgtgaggctatgttgggtcctagcaaacacagaagtggatgct
cacagtcagctattggatgtattacagggcccccaatggaggagctagag
aaagtacccaaggagctgaaggggtctgcaaccctataggtggaacaaca
atatgaactacccagtactacagagctcgtatctctagctgcatatgtat
cagaagatggcctagtcggccatcactggaaagagaggctcattggtctt
gcaaactttatatgcctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_94655170_94655319
seq2: B6Ng01-269H02.g_457_631 (reverse)

seq1  TGAGGCATATAAAGTTTGCAAGACCAACGGGCCTCTCTTTCCACTGATGG  50
      ||||||||||||||||||||||||||| | ||||||||||||| ||||||
seq2  TGAGGCATATAAAGTTTGCAAGACCAATGAGCCTCTCTTTCCAGTGATGG  50

seq1  TCCACTAGGCCATCTTCTGATACATATGCAGCTAGAAACATGATCTCCGG  100
       | ||||||||||||||||||||||||||||||||| | | || |||   
seq2  CCGACTAGGCCATCTTCTGATACATATGCAGCTAGAGATACGAGCTC---  97

seq1  GGGGGGGGGGGTACTGGTTAGTTCATATTG--------------------  130
             |  ||||||| ||||||||||||                    
seq2  ------TGTAGTACTGGGTAGTTCATATTGTTGTTCCACCTATAGGGTTG  141

seq1  --------------TCCTTGGGTACTTTCTCTAG  150
                    ||||||||||||||||||||
seq2  CAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAG  175


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