BAC Information

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BAC

Clone NameB6Ng01-269P07
Chromosome14 (Build37)
Map Location 69,262,418 - 69,416,300
singlet/doubletdoublet
Overlap geneAdam28, LOC100043082
Upstream geneCdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072, Adam7, Adamdec1, LOC641033
Downstream geneStc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269P07.bB6Ng01-269P07.g
ACCGA072421GA072422
length934832
definitionB6Ng01-269P07.b B6Ng01-269P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,415,366 - 69,416,300)(69,262,418 - 69,263,248)
sequence
gaattcagggacaacataatagagtttgaaagaaaaactcagaggtaagt
aaagaggcactttcctctgtctccacatagaatgaatgttgcacaatctc
tcagacattctgccttctcaccattccctgagctactctcttctcctccc
atttgagttctaatggagccagtaactcttgttgcatccatcctgtggat
gccagaacccatggcactgctgttatggaaaggggatttaaatatagtcc
cttcctgttatttgagtcatggggtcctaaaggtcaaaacaaccagagtt
ccaggggtatttgaaagattttaaaaccttatctggaaaataggaggaag
tgggaagcccgcaaatcctccaggctacatggctgcttctgtgggataga
tgttcaggagcttgtgaagcaagaagtgcttaccctctttccaagacttc
ccaaggcaggaacagctgctgtttggcatcttacttagactagagctatt
gaatggatcattaagtgtcatctttgggactaatctgagagaagccagag
caactatctatgtgttttccactgtgatgcagacctgaattaaatgttca
aatcatgattttcatgactcaggcagtcatatcaggctgttccagatctg
cctgcccattcttactctctagtcttccttctaagccatgggcagttata
gtctgccttttctgctcagctctgtgttttaccttgactagaacacgcca
gacttgactatcttttttttcctttcctttcctttcctttcctttccttt
cctttcctttcctttcctttcctttcctttccctttccttttcctttcct
tttccttttcctttcctttcccttcccttctccttctccttctcctttct
ccttctccttctccttctccttctcctttcttcc
gaattcttagactccacaaccaactagaatttgaaaccttggaacaacaa
ttttctgttgctcagtagttaagatagagactttaaaaaaattaaatata
agcattttgtctcaaattttaaaaatagttaataacccccaaatacttat
attacacagtctgcatactatatgttaccctaaatatagtgtagtatata
acattatacacaacaaataatgtattttatattttactataatacattca
taatgctgacacagcataaaatagctgtgcactatttagaaaaaaaattg
tacttagttatctgtttaaaatttaattctctgaacatctggcttttttt
tatcttcaaaaattatattttttttccagttaggactgatcacctttgcc
cctcttttaaacttatgagttattcaggtcgtttgtcctaagagggaaac
ttgatttaagtgaacttgcacaacacacaatgattttatttggagccaaa
taccatagttatttctccatgtggcccttctatcttggaagagacgtggc
cttagcctatgtaaccccagaaggtttgacgatttgcaacaaaaaagggg
tccctgaggaggatgctgagccacacagttgtgggctccatgggagtgag
ggggatttggggagacagatctagagtggagttacttagggcaatatgga
agtctatatttgatgtggagggagtagtcttgagtgttacagaccataat
ttgagaggtgtgataataaagagctacatatagcagactttcttagctct
ctatgttacagagtctgtctgcagaaatcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69415366_69416300
seq2: B6Ng01-269P07.b_45_969 (reverse)

seq1  GAGAA-GAGAA-GAGAAGAGAAGAGAAGAGAAGAGAAGGAAGGGAAGGGG  48
      ||||| ||||| |||||| ||  || ||| | ||||||||   ||||| |
seq2  GAGAAGGAGAAGGAGAAG-GAGAAGGAGAAAGGAGAAGGA---GAAGGAG  46

seq1  AGGGGAGGGAAGGGGAGGGGAGGGGGAGGAAAAGGAAAAGGAAAGGAAAA  98
      |    ||||||||| | || |     ||||||||||||||||||||||||
seq2  A----AGGGAAGGGAAAGGAA-----AGGAAAAGGAAAAGGAAAGGAAAA  87

seq1  GGAAA-GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  137

seq1  AGGAAAGGAAAGGAAAGGAAAAAAAAGATAGTCAAGTCTGGCGTGTTCTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGAAAGGAAAGGAAAAAAAAGATAGTCAAGTCTGGCGTGTTCTA  187

seq1  GTCAAGGTAAAACACAGAGCTGAGCAGAAAAGGCAGACTATAACTGCCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGTAAAACACAGAGCTGAGCAGAAAAGGCAGACTATAACTGCCCA  237

seq1  TGGCTTAGAAGGAAGACTAGAGAGTAAGAATGGGCAGGCAGATCTGGAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGAAGGAAGACTAGAGAGTAAGAATGGGCAGGCAGATCTGGAAC  287

seq1  AGCCTGATATGACTGCCTGAGTCATGAAAATCATGATTTGAACATTTAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATATGACTGCCTGAGTCATGAAAATCATGATTTGAACATTTAAT  337

seq1  TCAGGTCTGCATCACAGTGGAAAACACATAGATAGTTGCTCTGGCTTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTGCATCACAGTGGAAAACACATAGATAGTTGCTCTGGCTTCTC  387

seq1  TCAGATTAGTCCCAAAGATGACACTTAATGATCCATTCAATAGCTCTAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAGTCCCAAAGATGACACTTAATGATCCATTCAATAGCTCTAGT  437

seq1  CTAAGTAAGATGCCAAACAGCAGCTGTTCCTGCCTTGGGAAGTCTTGGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAAGATGCCAAACAGCAGCTGTTCCTGCCTTGGGAAGTCTTGGAA  487

seq1  AGAGGGTAAGCACTTCTTGCTTCACAAGCTCCTGAACATCTATCCCACAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTAAGCACTTCTTGCTTCACAAGCTCCTGAACATCTATCCCACAG  537

seq1  AAGCAGCCATGTAGCCTGGAGGATTTGCGGGCTTCCCACTTCCTCCTATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCATGTAGCCTGGAGGATTTGCGGGCTTCCCACTTCCTCCTATT  587

seq1  TTCCAGATAAGGTTTTAAAATCTTTCAAATACCCCTGGAACTCTGGTTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATAAGGTTTTAAAATCTTTCAAATACCCCTGGAACTCTGGTTGT  637

seq1  TTTGACCTTTAGGACCCCATGACTCAAATAACAGGAAGGGACTATATTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTTTAGGACCCCATGACTCAAATAACAGGAAGGGACTATATTTA  687

seq1  AATCCCCTTTCCATAACAGCAGTGCCATGGGTTCTGGCATCCACAGGATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCTTTCCATAACAGCAGTGCCATGGGTTCTGGCATCCACAGGATG  737

seq1  GATGCAACAAGAGTTACTGGCTCCATTAGAACTCAAATGGGAGGAGAAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACAAGAGTTACTGGCTCCATTAGAACTCAAATGGGAGGAGAAGA  787

seq1  GAGTAGCTCAGGGAATGGTGAGAAGGCAGAATGTCTGAGAGATTGTGCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCTCAGGGAATGGTGAGAAGGCAGAATGTCTGAGAGATTGTGCAA  837

seq1  CATTCATTCTATGTGGAGACAGAGGAAAGTGCCTCTTTACTTACCTCTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCTATGTGGAGACAGAGGAAAGTGCCTCTTTACTTACCTCTGA  887

seq1  GTTTTTCTTTCAAACTCTATTATGTTGTCCCTGAATTC  935
      ||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTTTCAAACTCTATTATGTTGTCCCTGAATTC  925

seq1: chr14_69262418_69263248
seq2: B6Ng01-269P07.g_68_899

seq1  GAATTCTTAGACTCCACAACCAACTAGAATTTGAAACCTTGGAACAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACTCCACAACCAACTAGAATTTGAAACCTTGGAACAACAA  50

seq1  TTTTCTGTTGCTCAGTAGTTAAGATAGAGACTTTAAAAAAATTAAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTGCTCAGTAGTTAAGATAGAGACTTTAAAAAAATTAAATATA  100

seq1  AGCATTTTGTCTCAAATTTTAAAAATAGTTAATAACCCCCAAATACTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTGTCTCAAATTTTAAAAATAGTTAATAACCCCCAAATACTTAT  150

seq1  ATTACACAGTCTGCATACTATATGTTACCCTAAATATAGTGTAGTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACAGTCTGCATACTATATGTTACCCTAAATATAGTGTAGTATATA  200

seq1  ACATTATACACAACAAATAATGTATTTTATATTTTACTATAATACATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATACACAACAAATAATGTATTTTATATTTTACTATAATACATTCA  250

seq1  TAATGCTGACACAGCATAAAATAGCTGTGCACTATTTAGAAAAAAAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGACACAGCATAAAATAGCTGTGCACTATTTAGAAAAAAAATTG  300

seq1  TACTTAGTTATCTGTTTAAAATTTAATTCTCTGAACATCTGGCTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGTTATCTGTTTAAAATTTAATTCTCTGAACATCTGGCTTTTTTT  350

seq1  TATCTTCAAAAATTATATTTTTTTTCCAGTTAGGACTGATCACCTTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCAAAAATTATATTTTTTTTCCAGTTAGGACTGATCACCTTTGCC  400

seq1  CCTCTTTTAAACTTATGAGTTATTCAGGTCGTTTGTCCTAAGAGGGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTAAACTTATGAGTTATTCAGGTCGTTTGTCCTAAGAGGGAAAC  450

seq1  TTGATTTAAGTGAACTTGCACAACACACAATGATTTTATTTGGAGCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTAAGTGAACTTGCACAACACACAATGATTTTATTTGGAGCCAAA  500

seq1  TACCATAGTTATTTCTCCATGTGGCCCTTCTATCTTGGAAGAGACGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAGTTATTTCTCCATGTGGCCCTTCTATCTTGGAAGAGACGTGGC  550

seq1  CTTAGCCTATGTAACCCCAGAAGGTTTGACGATTTGCAACAAAAAAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTATGTAACCCCAGAAGGTTTGACGATTTGCAACAAAAAAGGGG  600

seq1  TCCCTGAGGAGGATGCTGAGCCACACAGTTGTGGGCTCCATGGGAGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGGAGGATGCTGAGCCACACAGTTGTGGGCTCCATGGGAGTGAG  650

seq1  GGGGATTTGGGGAGACAGATCTAGAGTGGAGTTACTTAGGGCAATATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTTGGGGAGACAGATCTAGAGTGGAGTTACTTAGGGCAATATGGA  700

seq1  AGTCTATATTTGATGTGGAGGGAGTAGTCTTGAGTGTTACAGACCATAA-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTCTATATTTGATGTGGAGGGAGTAGTCTTGAGTGTTACAGACCATAAT  750

seq1  TTGAGAGGTGTGATAATAAAGAGCTACATATAGCAGACATTCTTAGCTCT  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTGAGAGGTGTGATAATAAAGAGCTACATATAGCAGACTTTCTTAGCTCT  800

seq1  CTATGTTACAGAGTCTGTCTGCAGAAATCAAC  831
      ||||||||||||||||||||||||||||||||
seq2  CTATGTTACAGAGTCTGTCTGCAGAAATCAAC  832