BAC Information

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BAC

Clone NameB6Ng01-270B17
Chromosome14 (Build37)
Map Location 60,127,925 - 60,129,054
singlet/doubletsinglet
Overlap geneCab39l
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2
Downstream geneCdadc1, Tmem46, Atp8a2, LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B17.bB6Ng01-270B17.g
ACCGA072535GA072536
length1,1971,140
definitionB6Ng01-270B17.b B6Ng01-270B17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagaggaacctggccaccccttcattcaaggggttccggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttgtttgagaatttttctgctt
atacagatcaaacaaatatgcagtaggcttcctatgtatttcattcctgg
aaacaccatgattgattagccagtaccaaaggtccaagcgagtcatgcca
ttataaatttcacctctcctgtgctgaccattactgggtatgttattata
aacattcttttgtctacgctgtccattataataactagaatcaccttgtc
tccggcgattcaatgctgccacctggcccttgttacctcggaatccaact
aaacccagtgaatttaattcatctaattgagcagaagcatctccaatgct
aagatctggcacaaggaaaagggaaagaacaaaaccctttcaaatgtgct
ggtgcccctctcaccaatttgcgtcttatagagctggtgaaaggcatatc
ttctggacctttcccattgtggacaattatgctttacacaatatatccac
tctagcattgcaatttccctaaggtcttaaatccctttcatcaacactaa
gccacggaatatcaggcatctccagtcattccagtaggcatctttttgat
aaacacctcaggcaacattcaaacaactttgacacttttttactatgcga
ggcttctgataactagaattctttactcgaaggactagttcataactcag
cctgctctagtttatggttccctttccacccccttatttccacaaac
gaattccatcttccttaacatctgaattgccctagtgaatgagaattccc
ggaaagaagttgttctgcagaatctgactggttgataagaacagcagtga
tgtatgtagaggtttctacacttcaggtcaaagctttatcttgagccaga
tttagctccctaaatagccatttgctttggccatgtctgtgttagaacac
cctgtgactaagagactaaaatcttttggaatctattaatttagtagacc
actagtttccatcaacccaaagctaagaatgtcatcagaaagcatttgag
gcctacaggagagatctctcatttgttgtaattgttctcatacacatcaa
tgtatttttatgattttctttgctctgctactataaaacttcctgaattg
ctttcatgaagaaacatggaacgagagtaacctagcttcatgcttctcaa
gtcattgtaatgtgacagggcaagtcagtgaagatttcctccatcttgta
ttcttgctgaggccattttaggtttaactaaaatttgatctccttgactg
gaagctttgtggaaaattactctattctgggaaaccaaggaaagtcagga
tgtcctgcctcacttatcttgacttgtgttaaatacctacttatgcaaac
ttctccagctaactgcttagcttctgttaaactgactgctttagcaaaac
ccctcactgcagcttcaaagtgagatacgaggatgtgctttttgccttta
aaagcctctttctctaaatgcccatggctacacttgggtaccaaatacct
gagcatagtctcaactggctggaataaagactttttaattgactatagaa
tatgtctgagtggtcgtctctggtggccttctcatcacagtcacttcaaa
tttgggttccagaatatttgttcttcattttgaggtgagagctgttttct
tttgaattgatggcccttaaatcttcctttgggaacataactaaccgttt
aaagaccttaataggacttaatcaaatctgggatttaaaaatgtgctctt
tccatttaggaggatgcttaatgttgccacaaggtattagaagacttaat
aaacaacacaaggaatgccatatgattatttaatctggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60127925_60129054
seq2: B6Ng01-270B17.g_69_1208 (reverse)

seq1  ATCCAGATTAAATATTCATAT-GCATTCCTTTGTGTTGTTTTATTTAGTC  49
      |||||||||||||| |||||| ||||||| |||||||| |||||| ||||
seq2  ATCCAGATTAAATAATCATATGGCATTCC-TTGTGTTG-TTTATTAAGTC  48

seq1  TTCTTAATAACCCTGTGGC-ACATTAAGCATCTTCTAAATTGGAAAGAGC  98
      ||| |||| ||| |||||| |||||||||||| ||  || ||||||||||
seq2  TTC-TAAT-ACCTTGTGGCAACATTAAGCATCCTCCTAAATGGAAAGAGC  96

seq1  ACA-TTTTAAAT-CCAGATTTGATTAAGTCCTA-TAAGTTCTTTAAAC-G  144
      ||| |||||||| |||||||||||||||||||| |||| ||||||||| |
seq2  ACATTTTTAAATCCCAGATTTGATTAAGTCCTATTAAGGTCTTTAAACGG  146

seq1  TTAG-TATGT--CCCAAGGAAGATTTAAGGGCCATCAATTC-AAAGAAAA  190
      |||| |||||  || |||||||||||||||||||||||||| ||||||||
seq2  TTAGTTATGTTCCCAAAGGAAGATTTAAGGGCCATCAATTCAAAAGAAAA  196

seq1  CAGCTCTCACCTC-AAATGAAGAACAAATATTCTGGAA-CCAAATTTG-A  237
      ||||||||||||| |||||||||||||||||||||||| ||||||||| |
seq2  CAGCTCTCACCTCAAAATGAAGAACAAATATTCTGGAACCCAAATTTGAA  246

seq1  GTGACTGTGATGAGAAGGCCACCAGAGACGACCACTCAGACATATTCTAT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTGATGAGAAGGCCACCAGAGACGACCACTCAGACATATTCTAT  296

seq1  AGTCAATT-AAAAGTCTTTATTCCAGCCAGTTGAGACTATGCTCAGGTAT  336
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTAAAAAGTCTTTATTCCAGCCAGTTGAGACTATGCTCAGGTAT  346

seq1  TTGGTACCCAAGTGTAGCCATGGGCATTTAGAGAAAGAGGCTTTTAAAGG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACCCAAGTGTAGCCATGGGCATTTAGAGAAAGAGGCTTTTAAAGG  396

seq1  CAAAAAGCACATCCTCGTATCTCACTTTGAAGCTGCAGTGAGGGGTTTTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCACATCCTCGTATCTCACTTTGAAGCTGCAGTGAGGGGTTTTG  446

seq1  CTAAAGCAGTCAGTTTAACAGAAGCTAAGCAGTTAGCTGGAGAAGTTTGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCAGTCAGTTTAACAGAAGCTAAGCAGTTAGCTGGAGAAGTTTGC  496

seq1  ATAAGTAGGTATTTAACACAAGTCAAGATAAGTGAGGCAGGACATCCTGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGGTATTTAACACAAGTCAAGATAAGTGAGGCAGGACATCCTGA  546

seq1  CTTTCCTTGGTTTCCCAGAATAGAGTAATTTTCCACAAAGCTTCCAGTCA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTGGTTTCCCAGAATAGAGTAATTTTCCACAAAGCTTCCAGTCA  596

seq1  AGGAGATCAAATTTTAGTTAAACCTAAAATGGCCTCAGCAAGAATACAAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCAAATTTTAGTTAAACCTAAAATGGCCTCAGCAAGAATACAAG  646

seq1  ATGGAGGAAATCTTCACTGACTTGCCCTGTCACATTACAATGACTTGAGA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAAATCTTCACTGACTTGCCCTGTCACATTACAATGACTTGAGA  696

seq1  AGCATGAAGCTAGGTTACTCTCGTTCCATGTTTCTTCATGAAAGCAATTC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGCTAGGTTACTCTCGTTCCATGTTTCTTCATGAAAGCAATTC  746

seq1  AGGAAGTTTTATAGTAGCAGAGCAAAGAAAATCATAAAAATACATTGATG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTTTATAGTAGCAGAGCAAAGAAAATCATAAAAATACATTGATG  796

seq1  TGTATGAGAACAATTACAACAAATGAGAGATCTCTCCTGTAGGCCTCAAA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAGAACAATTACAACAAATGAGAGATCTCTCCTGTAGGCCTCAAA  846

seq1  TGCTTTCTGATGACATTCTTAGCTTTGGGTTGATGGAAACTAGTGGTCTA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTGATGACATTCTTAGCTTTGGGTTGATGGAAACTAGTGGTCTA  896

seq1  CTAAATTAATAGATTCCAAAAGATTTTAGTCTCTTAGTCACAGGGTGTTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTAATAGATTCCAAAAGATTTTAGTCTCTTAGTCACAGGGTGTTC  946

seq1  TAACACAGACATGGCCAAAGCAAATGGCTATTTAGGGAGCTAAATCTGGC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGACATGGCCAAAGCAAATGGCTATTTAGGGAGCTAAATCTGGC  996

seq1  TCAAGATAAAGCTTTGACCTGAAGTGTAGAAACCTCTACATACATCACTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATAAAGCTTTGACCTGAAGTGTAGAAACCTCTACATACATCACTG  1046

seq1  CTGTTCTTATCAACCAGTCAGATTCTGCAGAACAACTTCTTTCCGGGAAT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTATCAACCAGTCAGATTCTGCAGAACAACTTCTTTCCGGGAAT  1096

seq1  TCTCATTCACTAGGGCAATTCAGATGTTAAGGAAGATGGAATTC  1130
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCACTAGGGCAATTCAGATGTTAAGGAAGATGGAATTC  1140