BAC Information

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BAC

Clone NameB6Ng01-271D04
Chromosome14 (Build37)
Map Location 38,801,554 - 38,802,734
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
Downstream geneNrg3, LOC100041521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271D04.bB6Ng01-271D04.g
ACCGA073347GA073348
length1,180887
definitionB6Ng01-271D04.b B6Ng01-271D04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaaataattctaatgtagattaaaaattgtataatatgctgt
acctgtgtttcacataattcaagtacttagagacaaaatagtgtctatgc
tttgtatgatagttggaaattaacaaaaaatagtttaatgtagaacagag
tagaagctgggaggccttagatggagcattagtataaaataaacattgtg
cattatagttatacaaaacaacatttcaggactgtacagaaaggattgtt
tagcatctgtgtaccttgatagacatatgaccctcaaatgtgacaaaagt
aggattgagtatgtaagtacacacacacaatatgcttttttcttgagtag
aattctaggtaagacaaatatagacttggggtcacccagcttctaattaa
aactttatccactctaggattctgcctttaattggttcaatgtccattct
aaagagctctaaagtgtaagtgtaatctcatatgaaattatatggaaagg
accaaatattgaactgtgtacattctaaacatgttttctttttatctctg
atttccctttttatttcattattttcttgtcttttatttttgagacaggt
tttctttgtgtacccctggctgacccagaattcattctatagactaggat
ggccacaaatttacaggtctgcctctctctgccatgcgagtgctgaaatt
aaagatatgcaccactgttgcctggcttctaagaatatttcttttttttt
aaatattttttattacatattttcttcaattacacttccaatgctatccc
caaaagtcccccataccctcccccccccccactcccctaccaacccattc
cccctttttgtccctggagttcccctgtactggggcatattaagtttgca
tattcaattggcctatttttcgagtgatggccgactaggccatcttttga
tacataagcagctagagtcaagagctccgggctactggttagttcataat
gtgttgcactacagggttgagatcccttagctctttgggtattttctcta
tctccttcattgggggccctgtgatccaccattagctggactgtagccat
tcacttattggtggcctagacccggtcctagttcacaaagagaaacgcta
tattcaggctcttcagcaggtgctttacta

gaattcagagcattttgcaaataattcaataaacaagaacaaatactaca
atacttacttctaaggaaaaatgtggagacctaaagggagcctctgcttt
tctacactcttagtctcttactcctcctgtagctattgtatggaatgctc
aagtgctggggctttggttatcagatataaaagaattcagtcagttctcc
tgatgctgggtggagtagtgcataagcattgtgactgacaagcctatacg
ttatttggtggactatggggcctagccatctaatcatccactaatctaag
tgctgttgagaaggtattctgtagttgtggtttacagttgcaatcagttg
ttcttttttatttttttatttttttattttttatttgtttttaaattttt
ttctttccattttttattaggtatttagctcatttacatttccaatgcta
taccaaaagtcccccatacccacccacccccactcccctacccgcccact
ccccctttttggccctggcgttcccctgttctggggcatataaagtttgt
gtgtccaatgggcctctctttccagtgatggccgactaggccatcttttg
atacatatgcagctagagtcaggagctccggggtactggttagttcataa
tgttgatccacctatagggttgcagatccctttagctccttgggtacttt
ctctagctcctccattgggagccctgtgatccatccattagctgactgtg
ggcatccactttctgtgtttgctaggccccggcatagtctcacaagagac
agctacatctggggtcctttcgataaaatcttgctagtgtatgcaatggt
gtcacctttgggatgctgatttatggggtggatccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_38801554_38802734
seq2: B6Ng01-271D04.b_42_1221

seq1  GAATTCAGGAAATAATTCTAATGTAGATTAAAAATTGTATAATATGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATAATTCTAATGTAGATTAAAAATTGTATAATATGCTGT  50

seq1  ACCTGTGTTTCACATAATTCAAGTACTTAGAGACAAAATAGTGTCTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTTTCACATAATTCAAGTACTTAGAGACAAAATAGTGTCTATGC  100

seq1  TTTGTATGATAGTTGGAAATTAACAAAAAATAGTTTAATGTAGAACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGATAGTTGGAAATTAACAAAAAATAGTTTAATGTAGAACAGAG  150

seq1  TAGAAGCTGGGAGGCCTTAGATGGAGCATTAGTATAAAATAAACATTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTGGGAGGCCTTAGATGGAGCATTAGTATAAAATAAACATTGTG  200

seq1  CATTATAGTTATACAAAACAACATTTCAGGACTGTACAGAAAGGATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGTTATACAAAACAACATTTCAGGACTGTACAGAAAGGATTGTT  250

seq1  TAGCATCTGTGTACCTTGATAGACATATGACCCTCAAATGTGACAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCTGTGTACCTTGATAGACATATGACCCTCAAATGTGACAAAAGT  300

seq1  AGGATTGAGTATGTAAGTACACACACACAATATGCTTTTTTCTTGAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGAGTATGTAAGTACACACACACAATATGCTTTTTTCTTGAGTAG  350

seq1  AATTCTAGGTAAGACAAATATAGACTTGGGGTCACCCAGCTTCTAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGGTAAGACAAATATAGACTTGGGGTCACCCAGCTTCTAATTAA  400

seq1  AACTTTATCCACTCTAGGATTCTGCCTTTAATTGGTTCAATGTCCATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATCCACTCTAGGATTCTGCCTTTAATTGGTTCAATGTCCATTCT  450

seq1  AAAGAGCTCTAAAGTGTAAGTGTAATCTCATATGAAATTATATGGAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTCTAAAGTGTAAGTGTAATCTCATATGAAATTATATGGAAAGG  500

seq1  ACCAAATATTGAACTGTGTACATTCTAAACATGTTTTCTTTTTATCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATATTGAACTGTGTACATTCTAAACATGTTTTCTTTTTATCTCTG  550

seq1  ATTTCCCTTTTTATTTCATTATTTTCTTGTCTTTTATTTTTGAGACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTTTTTATTTCATTATTTTCTTGTCTTTTATTTTTGAGACAGGT  600

seq1  TTTCTTTGTGTACCCCTGGCTGACCCAGAATTCATTCTATAGACTAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTGTACCCCTGGCTGACCCAGAATTCATTCTATAGACTAGGAT  650

seq1  GGCCACAAATTTACAGGTCTGCCTCTCTCTGCCATGCGAGTGCTGAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAAATTTACAGGTCTGCCTCTCTCTGCCATGCGAGTGCTGAAATT  700

seq1  AAAGATATGCACCACTGTTGCCTGGCTTCTAAGAATATTTCTTTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATGCACCACTGTTGCCTGGCTTCTAAGAATATTTCTTTTTTTTT  750

seq1  AAATATTTTTTATTACATATTTTCTTCAATTACACTTCCAATGCTAT-CC  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATATTTTTTATTACATATTTTCTTCAATTACACTTCCAATGCTATCCC  800

seq1  CAAAAGTCCCCCATACCCT-CCCCCCCCCCACTCCCCTACCAACCCATTC  848
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAAAGTCCCCCATACCCTCCCCCCCCCCCACTCCCCTACCAACCCATTC  850

seq1  CCCCTTTTTGTCCCTGGAGTTCCCCTGTACTGGGGCATATTAAGTTTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTTGTCCCTGGAGTTCCCCTGTACTGGGGCATATTAAGTTTGCA  900

seq1  TATTCAATTGGCCTATTTTTCGAGTGATGGCCGACTAGGCCATCTTTTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATTGGCCTATTTTTCGAGTGATGGCCGACTAGGCCATCTTTTGA  950

seq1  TACATAAGCAGCTAGAGTCAAGAGCTCCGGGCTACTGGTTAGTTCATAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGCAGCTAGAGTCAAGAGCTCCGGGCTACTGGTTAGTTCATAAT  1000

seq1  GTTGTTGCACCTACAGGGTTGAAGATCCCTTTAGCTCCTTGGGTATTTTC  1048
      | ||||||| ||||||||||| ||||||| ||||||| ||||||||||||
seq2  G-TGTTGCA-CTACAGGGTTG-AGATCCC-TTAGCTCTTTGGGTATTTTC  1046

seq1  TCTATCTCCTCCATTGGGGGCCCTGTGATCCACCCAATAGCT-GACTGTT  1097
      |||||||||| ||||||||||||||||||||| ||| ||||| |||||| 
seq2  TCTATCTCCTTCATTGGGGGCCCTGTGATCCA-CCATTAGCTGGACTGTA  1095

seq1  AGCATCCACTTATGTGTTTGCTAGACCCCGGCCTAGTCTCAC-AAGAGAC  1146
        ||| |||||||  ||   |||||||| | |||||| |||| |||||| 
seq2  GCCATTCACTTATTGGTGGCCTAGACCCGGTCCTAGT-TCACAAAGAGAA  1144

seq1  A-GCTATA-TCAGGGTCCTTTCAGCAAGTGC-TTACTA  1181
      | |||||| ||||| ||  ||||||| |||| ||||||
seq2  ACGCTATATTCAGGCTC--TTCAGCAGGTGCTTTACTA  1180


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