BAC Information

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BAC

Clone NameB6Ng01-271M13
Chromosome14 (Build37)
Map Location 49,099,567 - 49,100,691
singlet/doubletsinglet
Overlap gene6720456H20Rik
Upstream geneFbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831
Downstream gene4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271M13.b
ACCGA073775
length1,118
definitionB6Ng01-271M13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatattttttggttgctccaagttggtttttcagaaagtgtagat
gaaaggtacttccagatttaagattcctatcatccatgcattgttgagaa
atgtgagctatcagattttagtgaactctcataagagagaggctgcagca
gacatgtaaaagagggtgagttctctatgggacagttcataccttctgga
acagctgaactgatttataaccagttatcctaaaagcttcctagtgggtg
cctaaagtttagttttcactggttctgaaagtttcaaacactaagggaaa
atgttgggttatatatttaaactatggagctctaagtcaagatcattaaa
aatgtagtcatttcacagagcttcagtttaatgcttgtacaaatgaactc
tcctgtgtttaggccaagtctgaagtgggatcgagcgtgtctacagtact
gctgtgagtatgatttcaaaactatcttacgtgaattttctattagctat
ttccaatgatttggggagatttcttattagttcctttcttaagaagtatg
tctgagaagtagttttcacctccacaattaatagctgcttatgcacactg
tattgccaagtgctttagctttccactaagaaaaggcttgaggcaagccg
tatcacagtagtgaggctagtgggagcctggccagtgcctaaacccgcac
attccacctgcatgtaaaattgcccatacggtggtgtctgaaaatgactt
gctcttccctatggtttcctattatctttctcttagggacgttgttggag
cattgcattcatcatgatttgaacaatttcttgttattttggtttgaatt
ctgctcatttaatccttaagagctgagtgcgtgtactatctcttatgact
cccttttagctgtcgtaagctttatttttgactttcatatttttaacatc
ccaccttattagaaccagcttagcaaatatatgtcatatgtattaccatg
gtttttctttggaagattgattaatgttttgctttaaaacttacagagat
taaggcaccttgaaactttcatgtcaccttaaactttatcaataccatta
tagcttcgatataaattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_49099567_49100691
seq2: B6Ng01-271M13.b_48_1165

seq1  GAATTCATATTTTTTGGTTGCTCCAAGTTGGTTTTTCAGAAAGTGTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTTTTGGTTGCTCCAAGTTGGTTTTTCAGAAAGTGTAGAT  50

seq1  GAAAGGTACTTCCAGATTTAAGATTCCTATCATCCATGCATTGTTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTACTTCCAGATTTAAGATTCCTATCATCCATGCATTGTTGAGAA  100

seq1  ATGTGAGCTATCAGATTTTAGTGAACTCTCATAAGAGAGAGGCTGCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGCTATCAGATTTTAGTGAACTCTCATAAGAGAGAGGCTGCAGCA  150

seq1  GACATGTAAAAGAGGGTGAGTTCTCTATGGGACAGTTCATACCTTCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTAAAAGAGGGTGAGTTCTCTATGGGACAGTTCATACCTTCTGGA  200

seq1  ACAGCTGAACTGATTTATAACCAGTTATCCTAAAAGCTTCCTAGTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGAACTGATTTATAACCAGTTATCCTAAAAGCTTCCTAGTGGGTG  250

seq1  CCTAAAGTTTAGTTTTCACTGGTTCTGAAAGTTTCAAACACTAAGGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGTTTAGTTTTCACTGGTTCTGAAAGTTTCAAACACTAAGGGAAA  300

seq1  ATGTTGGGTTATATATTTAAACTATGGAGCTCTAAGTCAAGATCATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGTTATATATTTAAACTATGGAGCTCTAAGTCAAGATCATTAAA  350

seq1  AATGTAGTCATTTCACAGAGCTTCAGTTTAATGCTTGTACAAATGAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTCATTTCACAGAGCTTCAGTTTAATGCTTGTACAAATGAACTC  400

seq1  TCCTGTGTTTAGGCCAAGTCTGAAGTGGGATCGAGCGTGTCTACAGTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTTTAGGCCAAGTCTGAAGTGGGATCGAGCGTGTCTACAGTACT  450

seq1  GCTGTGAGTATGATTTCAAAACTATCTTACGTGAATTTTCTATTAGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGTATGATTTCAAAACTATCTTACGTGAATTTTCTATTAGCTAT  500

seq1  TTCCAATGATTTGGGGAGATTTCTTATTAGTTCCTTTCTTAAGAAGTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGATTTGGGGAGATTTCTTATTAGTTCCTTTCTTAAGAAGTATG  550

seq1  TCTGAGAAGTAGTTTTCACCTCCACAATTAATAGCTGCTTATGCACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAGTAGTTTTCACCTCCACAATTAATAGCTGCTTATGCACACTG  600

seq1  TATTGCCAAGTGCTTTAGCTTTCCACTAAGAAAAGGCTTGAGGCAAGCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCAAGTGCTTTAGCTTTCCACTAAGAAAAGGCTTGAGGCAAGCCG  650

seq1  TATCACAGTAGTGAGGCTAGTGGGAGCCTGGCCAGTGCCTAAACCCGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAGTAGTGAGGCTAGTGGGAGCCTGGCCAGTGCCTAAACCCGCAC  700

seq1  ATTCCACCTGCATGTAAAATTGCCCATACGGTGGTGTCTGAAAATGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACCTGCATGTAAAATTGCCCATACGGTGGTGTCTGAAAATGACTT  750

seq1  GCTCTTCCCTATGGTTTCCTATTATCTTTCTCTTAGGGACGTTGTTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCCTATGGTTTCCTATTATCTTTCTCTTAGGGACGTTGTTGGAG  800

seq1  CATTGCATTCATCATGATTTGAACAATTTCTTGTTATTTTGGTTTGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATTCATCATGATTTGAACAATTTCTTGTTATTTTGGTTTGAATT  850

seq1  CTGCTCATTTAATCCTTAAGAGCTGAGTGCGTGTACTATCTCTTATGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATTTAATCCTTAAGAGCTGAGTGCGTGTACTATCTCTTATGACT  900

seq1  CCCTTTTAGCTGTCGTAAGCTTTATTTTTGACTTTCATATTTTTAACATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTAGCTGTCGTAAGCTTTATTTTTGACTTTCATATTTTTAACATC  950

seq1  CAACCTTATTAGAACCAGCTTAAGCAAATATATGTCATATGTATTAACCA  1000
      | ||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  CCACCTTATTAGAACCAGCTT-AGCAAATATATGTCATATGTATT-ACCA  998

seq1  ATGGTTTTCTTTGAAGAATGGATTAATG-TTTGCTTTAAAACCTACAGAG  1049
        | ||||||||| |  || |||||||| ||||||||||||| |||||||
seq2  TGGTTTTTCTTTGGAAGATTGATTAATGTTTTGCTTTAAAACTTACAGAG  1048

seq1  ATTAAGGCACTTGAAAACTATCCATGTCAACTTTAAAACTTATCAATACC  1099
      |||||||||| |  ||||| | |||||| || |||||  |||||||||||
seq2  ATTAAGGCACCTTGAAACT-TTCATGTC-ACCTTAAACTTTATCAATACC  1096

seq1  AATTATAATTCTTCAAATATAAATTT  1125
       ||||||   ||||  ||||||||||
seq2  -ATTATA--GCTTC-GATATAAATTT  1118