BAC Information

Click to search

BAC

Clone NameB6Ng01-272L19
Chromosome14 (Build37)
Map Location 112,646,831 - 112,647,767
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272L19.bB6Ng01-272L19.g
ACCGA074487GA074488
length875962
definitionB6Ng01-272L19.b B6Ng01-272L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcaattctcgaccatacagcacaagccattgctgtt
ctattcaggaattttccccctgtacccatatcttcgaggcttttccctat
tttctcctctataagttttagtgtctctggttttatgtgaagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggctttagctcccttgtcaaagatcaagt
gaccatatgtgtgtgggttcatctctggttcttcaattctgttccagtgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggattttgttattttatatga
atttgcagattgccctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatattgttcctgccaatccatgagcatgggagatctttccatcttt
ctgagatctttaaatttctttcttc

gaattctctgtttatacctgtaattgaaaactctttgagttctttatata
ttttggacatttgtcctaaatcagatttgaaaatggttaaacaaaacaaa
acaaaacaaaacgaactttccttattttgcaggctactgcattgtgcaaa
taatggtgcttttttaaaaattttaatttaattttattttttgccatgca
gaaacatttcaggtaatgaggtcctacttactaatttttgccttagcgct
tctgctgatgtgttttctgtgaagagagttttcctatgccaatgcactca
aggctattccgcactctctcttctatcaggttcactgtattcattttatt
tttacttttacttttacttttacttttacttttacttttacttttacttt
tatttttatttttatttttatttttatttttatttttgctgaggttttgg
atgcactttgtgtttagttttttttgtagtgtgataattacggatctact
tgaattctttatatacaaccatcctgatagtgcagctctcagtagaaaaa
aacaaaaaacaaataaagtttgcacagtgcccagggcaaacctctccttg
tagagggttctgaaagaacagttgtctaggagcatctaaaacaaactgcc
tgaagttaaattgtgagtctatcctggcagtttatgttctgctggagatg
gctctctaaacagctctcttttgatagctcttggctctgtagtctacttg
agatattcagactgttctttgtttctgtgttctactctgctctgttctag
actgccttttcttgatactataaaaatctttctagttgaagagaactagc
tttctgctcagacagctcactctgagtgagtcattttctctgcaagtaaa
atctaaagcttctctgctagcctcatagtttctgacatcagaagaaaaaa
atgctgtagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112646831_112647767
seq2: B6Ng01-272L19.g_103_1026

seq1  GTTCTTTATATATTTTGGACATTTGTCCTAAATCAGATTTGAAAATGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTATATATTTTGGACATTTGTCCTAAATCAGATTTGAAAATGGTT  50

seq1  AAACAAAACAAAACAAAACAAAACGAACTTTCCTTATTTTGCAGGCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAACAAAACGAACTTTCCTTATTTTGCAGGCTACT  100

seq1  GCATTGTGCAAATAATGGTGCTTTTTTAAAAATTTTAATTTAATTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTGCAAATAATGGTGCTTTTTTAAAAATTTTAATTTAATTTTATT  150

seq1  TTTTGCCATGCAGAAACATTTCAGGTAATGAGGTCCTACTTACTAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCATGCAGAAACATTTCAGGTAATGAGGTCCTACTTACTAATTTT  200

seq1  TGCCTTAGCGCTTCTGCTGATGTGTTTTCTGTGAAGAGAGTTTTCCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAGCGCTTCTGCTGATGTGTTTTCTGTGAAGAGAGTTTTCCTATG  250

seq1  CCAATGCACTCAAGGCTATTCCGCACTCTCTCTTCTATCAGGTTCACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCACTCAAGGCTATTCCGCACTCTCTCTTCTATCAGGTTCACTGT  300

seq1  ATTCATTTTATTTTTACTTTTACTTTTACTTTTACTTTTACTTTTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTATTTTTACTTTTACTTTTACTTTTACTTTTACTTTTACTTT  350

seq1  TACTTTTACTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTACTTTTATTTTTATTTTTATTTTTATTTTTATTTTTATTTTTG  400

seq1  CTGAGGTTTTGGATGCACTTTGTGTTTAGTTTTTTTTGTAGTGTGATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTTTGGATGCACTTTGTGTTTAGTTTTTTTTGTAGTGTGATAAT  450

seq1  TACGGATCTACTTGAATTCTTTATATACAACCATCCTGATAGTGCAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGATCTACTTGAATTCTTTATATACAACCATCCTGATAGTGCAGCTC  500

seq1  TCAGTAGAAAAAAACAAAAAACAAATAAAGTTTGCACAGTGCCCAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGAAAAAAACAAAAAACAAATAAAGTTTGCACAGTGCCCAGGGCA  550

seq1  AACCTCTCCTTGTAGAGGGTTTCTGAAAGAACAGTTGTCTAGGAGCATCT  600
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACCTCTCCTTGTAGAGGG-TTCTGAAAGAACAGTTGTCTAGGAGCATCT  599

seq1  AAAACAAACTGCCTGAAGTTAAATTGTGAGTCTATCCTGGCAGTTTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACTGCCTGAAGTTAAATTGTGAGTCTATCCTGGCAGTTTATGT  649

seq1  TCTGCTGGAGATGGCTCTCTAAACAGCTCTCTTTTGATAGCTCTTGGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGAGATGGCTCTCTAAACAGCTCTCTTTTGATAGCTCTTGGCTC  699

seq1  TGTAGTCTACTTGAGATATTCAGACTGTTCTTTGTTTCTGTGTTCTACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCTACTTGAGATATTCAGACTGTTCTTTGTTTCTGTGTTCTACTC  749

seq1  TGCTCTGTTCTAGACTGCCTTTTCTTGATACTATAAAAATCTTTCTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTTCTAGACTGCCTTTTCTTGATACTATAAAAATCTTTCTAGTT  799

seq1  G-AGAGAACTAGCTTTCTGCTCAAGACAGCTCACTCTGAGTGAGTCAATT  849
      | |||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  GAAGAGAACTAGCTTTCTGCTC-AGACAGCTCACTCTGAGTGAGTC-ATT  847

seq1  TTCTCTGCAAGTAAAAATTCTAAAAGCTCTCTGGCTAG-CTCATAGGTTT  898
      ||||||||||||||||  ||||||   ||||| ||||| |||||||  ||
seq2  TTCTCTGCAAGTAAAA--TCTAAAGCTTCTCT-GCTAGCCTCATAG--TT  892

seq1  TCTGACCAAATTCAGAAGAAAAAAAAAATGCTGTAGAAA  937
      ||||||     |||||||   ||||||||||||||||||
seq2  TCTGAC----ATCAGAAG---AAAAAAATGCTGTAGAAA  924


| Home | SequenceCutter | Blast | Download |