BAC Information

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BAC

Clone NameB6Ng01-273L19
Chromosome14 (Build37)
Map Location 123,931,469 - 123,932,343
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream genePcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273L19.bB6Ng01-273L19.g
ACCGA075231GA075232
length1,213870
definitionB6Ng01-273L19.b B6Ng01-273L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggcct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttcactttccttcgttagagtcacgccgagatattttatatt
atttgtggctattgagaaagggtgttgtttccctaatttctttctcagcc
tgtttaattctttgtgtagagaaaggcatttgacttgtttgagttaattt
tatatccagctaccttcaccgaagcttgtttatcaggttaggagttctct
ggtgcaatttttaaggtcaccttataatatacctatcaaattcatctggc
caaaaagggaaatttaggaactacctctttccaaattttggaatagctcc
ccctctgagtaat
gaattcctgtggctttgttttactttaatacttttggattttgtatgtaa
aagcaggtgtgtgtctgactgcctgtttgtctgcatatgtattattctaa
ctatttcatttataagttaactttttttttcagttagaaataacacttct
tgggcaagtgttttagagccttgaaatgagacatactataactcttattg
aaaaataatttatcagttcatattactgaatcatgccttagttaagaaac
caaaatattatctttagaaaaataacaatctcaggtttaaagtgtctctt
ttttttaacactgcaagaaatcttaagtgggtccttatataacatgtgaa
tattgcattgttattttagacttgtgataagaaatcatcttttgggttaa
gagtttatatggaatatgaattcctgtggttaggcttgctggtaacttac
agcaagactaatagagtgagtgtgtgtgtatgtgtgtgtgtaaaaggtag
ctcttttatggaaagccattgtgaattttgccttgtagttttctctagaa
ctatcaattcagatccacatatttatatgaggttttaaaataacagtata
ttagatttggctactactttctccttccctcaactgacatctgtatgagg
atcagcctttggagaggactgaaccatagccataaactactttgactatc
agctatgtagtagttgagatccaccgacctgggcaatatagatggctgag
ctctgccctagcactcaacttatgcggcagctgtaccatcctctggcata
gttttcaagtctctgcagtgtgcttctcttccagctgctaggaggggaac
tgtatgaaaatcattatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123931469_123932343
seq2: B6Ng01-273L19.g_67_936 (reverse)

seq1  TACATAAATGATTTTTCATAACCAATTTCCCTCCTAGCAGCTGG-AGAGA  49
      ||||| ||||| ||||||||  || || |||||||||||||||| |||||
seq2  TACAT-AATGA-TTTTCATA--CAGTTCCCCTCCTAGCAGCTGGAAGAGA  46

seq1  GCAACACTGCAGAGACTTGAAAACTATGCCAGAGGATGGTACAGCTGCCG  99
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGCAGAGACTTGAAAACTATGCCAGAGGATGGTACAGCTGCCG  96

seq1  CATAAGTTGAGTTGCTAGGGCAGAGCTCAGCCATCTATATTGCCCAGGTC  149
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTGAG-TGCTAGGGCAGAGCTCAGCCATCTATATTGCCCAGGTC  145

seq1  GGTGGATCTCAACTACTACATAGCCTGATAGTCAAAGTAGTTTATGGCTA  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGTGGATCTCAACTACTACATAG-CTGATAGTCAAAGTAGTTTATGGCTA  194

seq1  TGGTTCAGTCCTCTCCAAAGGCTGATCCTCATACAGATGTCAGTTGAGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAGTCCTCTCCAAAGGCTGATCCTCATACAGATGTCAGTTGAGGG  244

seq1  AAGGAGAAAGTAGTAGCCAAATCTAATATACTGTTATTTTAAAACCTCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAAGTAGTAGCCAAATCTAATATACTGTTATTTTAAAACCTCAT  294

seq1  ATAAATATGTGGATCTGAATTGATAGTTCTAGAGAAAACTACAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGTGGATCTGAATTGATAGTTCTAGAGAAAACTACAAGGCAAA  344

seq1  ATTCACAATGGCTTTCCATAAAAGAGCTACCTTTTACACACACACATACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAATGGCTTTCCATAAAAGAGCTACCTTTTACACACACACATACA  394

seq1  CACACACTCACTCTATTAGTCTTGCTGTAAGTTACCAGCAAGCCTAACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCACTCTATTAGTCTTGCTGTAAGTTACCAGCAAGCCTAACCA  444

seq1  CAGGAATTCATATTCCATATAAACTCTTAACCCAAAAGATGATTTCTTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTCATATTCCATATAAACTCTTAACCCAAAAGATGATTTCTTAT  494

seq1  CACAAGTCTAAAATAACAATGCAATATTCACATGTTATATAAGGACCCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCTAAAATAACAATGCAATATTCACATGTTATATAAGGACCCAC  544

seq1  TTAAGATTTCTTGCAGTGTTAAAAAAAAGAGACACTTTAAACCTGAGATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTTCTTGCAGTGTTAAAAAAAAGAGACACTTTAAACCTGAGATT  594

seq1  GTTATTTTTCTAAAGATAATATTTTGGTTTCTTAACTAAGGCATGATTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTCTAAAGATAATATTTTGGTTTCTTAACTAAGGCATGATTCA  644

seq1  GTAATATGAACTGATAAATTATTTTTCAATAAGAGTTATAGTATGTCTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATGAACTGATAAATTATTTTTCAATAAGAGTTATAGTATGTCTCA  694

seq1  TTTCAAGGCTCTAAAACACTTGCCCAAGAAGTGTTATTTCTAACTGAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGCTCTAAAACACTTGCCCAAGAAGTGTTATTTCTAACTGAAAA  744

seq1  AAAAAGTTAACTTATAAATGAAATAGTTAGAATAATACATATGCAGACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTAACTTATAAATGAAATAGTTAGAATAATACATATGCAGACAA  794

seq1  ACAGGCAGTCAGACACACACCTGCTTTTACATACAAAATCCAAAAGTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGTCAGACACACACCTGCTTTTACATACAAAATCCAAAAGTATT  844

seq1  AAAGTAAAACAAAGCCACAGGAATTC  875
      ||||||||||||||||||||||||||
seq2  AAAGTAAAACAAAGCCACAGGAATTC  870