BAC Information

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BAC

Clone NameB6Ng01-274D12
Chromosome14 (Build37)
Map Location 93,502,379 - 93,503,200
singlet/doubletsinglet
Overlap genePcdh9
Upstream geneLOC638252
Downstream geneLOC668566, LOC100043356
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274D12.bB6Ng01-274D12.g
ACCGA075579GA075580
length7711,160
definitionB6Ng01-274D12.b B6Ng01-274D12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactaaacattcacaaaaagtaaatatagggaggactgacata
tacttgcttagtgataagtttttcagcacatttatcagaaagtcatattc
tagataacacataagcatagcaagatgaaagttatatcaacaacaactac
agaatacctcttaaaataacaacagatttatttttttacatatctggtgg
taacatatttttaaattgggtttaaataatacacatgcaaatgttgaaaa
caaaatcaagtgctgatattgcttattgttctgatgcccaagtacaaaat
gttttaatttggggatgatttacattaccttctatgcattgtgtatttca
aaattatcatttattctttgcctagaaatatttatatttgaataaagtga
tttcatttagatggcgtagagaaatttgttctccaaaacaaacacatgaa
gggacaggaaacaaaggtgatgtttcatatatgctcacttaaacacctag
tatataaacaactcatcactgagcatttctaaatgtgaacactccatctt
gaaaaaaatcttgaatttttgttacatacacagtaatgagatgaatgaaa
gtattgaagtgaaataaattaaaatacttatttaaaaaacagaaagaagg
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaagggagggacg
gagggagggaggggagggagg

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgttttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcagttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttagttatcagagtaatagtggcttcataaaatgagttg
ggtagagtacttactacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtaattggtatctgtccagaaatatgtccatttcgtccaggttttcta
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccccgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttcttca
tggaggcactcagagctatgagttccctcttagaaatgctttcattgtgt
cccaaagtttgggtacgttgtggcttcatttcataaacttctaaaagtct
tatttctttcttattcacctgaacaagtatcatgaagaggttgtcagttc
cgtgaagtagcttccataattagtgttattggagaatcaggctatatggc
aatgggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_93502379_93503200
seq2: B6Ng01-274D12.b_41_811 (reverse)

seq1  CCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC  50
                                                  ||||||
seq2  --------------------------------------------CCTCCC  6

seq1  TCCCACCCTCCCTCCCTCCCTCCCTCCGTCCCTCCCTTCTTTCTTTCTTT  100
      ||       |||||||||||||| ||| ||||| | ||||||||||||||
seq2  TC-------CCCTCCCTCCCTCCGTCCCTCCCTTCTTTCTTTCTTTCTTT  49

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  99

seq1  TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTGTTTTTTAAATAAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTGTTTTTTAAATAAGTATT  149

seq1  TTAATTTATTTCACTTCAATACTTTCATTCATCTCATTACTGTGTATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATTTCACTTCAATACTTTCATTCATCTCATTACTGTGTATGTA  199

seq1  ACAAAAATTCAAGATTTTTTTCAAGATGGAGTGTTCACATTTAGAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATTCAAGATTTTTTTCAAGATGGAGTGTTCACATTTAGAAATGC  249

seq1  TCAGTGATGAGTTGTTTATATACTAGGTGTTTAAGTGAGCATATATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATGAGTTGTTTATATACTAGGTGTTTAAGTGAGCATATATGAAA  299

seq1  CATCACCTTTGTTTCCTGTCCCTTCATGTGTTTGTTTTGGAGAACAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCTTTGTTTCCTGTCCCTTCATGTGTTTGTTTTGGAGAACAAATT  349

seq1  TCTCTACGCCATCTAAATGAAATCACTTTATTCAAATATAAATATTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACGCCATCTAAATGAAATCACTTTATTCAAATATAAATATTTCTA  399

seq1  GGCAAAGAATAAATGATAATTTTGAAATACACAATGCATAGAAGGTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGAATAAATGATAATTTTGAAATACACAATGCATAGAAGGTAATG  449

seq1  TAAATCATCCCCAAATTAAAACATTTTGTACTTGGGCATCAGAACAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATCCCCAAATTAAAACATTTTGTACTTGGGCATCAGAACAATAA  499

seq1  GCAATATCAGCACTTGATTTTGTTTTCAACATTTGCATGTGTATTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATCAGCACTTGATTTTGTTTTCAACATTTGCATGTGTATTATTTA  549

seq1  AACCCAATTTAAAAATATGTTACCACCAGATATGTAAAAAAATAAATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATTTAAAAATATGTTACCACCAGATATGTAAAAAAATAAATCTG  599

seq1  TTGTTATTTTAAGAGGTATTCTGTAGTTGTTGTTGATATAACTTTCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTTTAAGAGGTATTCTGTAGTTGTTGTTGATATAACTTTCATCT  649

seq1  TGCTATGCTTATGTGTTATCTAGAATATGACTTTCTGATAAATGTGCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGCTTATGTGTTATCTAGAATATGACTTTCTGATAAATGTGCTGA  699

seq1  AAAACTTATCACTAAGCAAGTATATGTCAGTCCTCCCTATATTTACTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTATCACTAAGCAAGTATATGTCAGTCCTCCCTATATTTACTTTT  749

seq1  TGTGAATGTTTAGTAAGAATTC  822
      ||||||||||||||||||||||
seq2  TGTGAATGTTTAGTAAGAATTC  771


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