BAC Information

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BAC

Clone NameB6Ng01-274K19
Chromosome14 (Build37)
Map Location 7,306,266 - 7,455,143
singlet/doubletdoublet
Overlap geneLOC546590, LOC666906, LOC100042024, LOC100041664
Upstream geneLOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964
Downstream geneLOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K19.bB6Ng01-274K19.g
ACCGA075916GA075917
length1,1591,011
definitionB6Ng01-274K19.b B6Ng01-274K19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,453,995 - 7,455,143)(7,306,266 - 7,306,533)
sequence
gaattctccagctttgggaggagaggttgccaacggggatcacacgggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagttggggaga
actagttagcaggtagatcatggaagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggagagaactagaatcttctgtg
ttgtcacctttgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggatcaccagcaggaatgttttcctggctgctcaggctatg
tcagaaagagaatggcgatgaaggagacaccagaccaacaaagaaggagg
agggaatcctttctcatgaaaaaggaagaaggaaatcattctggagaagg
cacagtgagtcctgggcagagttggggatcttcctggtagaggtaggctt
gagctgggccttccaggagtatgtcttacaagctgaagccttggactttg
ccaatgtcaaagagtcaagaatttctgatgattagtttgacagagccagg
aattgacaaacctgcagctacttttctgggagctatttaatttcaatttg
agtgccaaagaatgccaggagtgggcactatgggaatatcagtgtgttat
tcctttcatggaagggagttgaaacacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgcttccctggtcat
gtcatgtggtgaggactcagacactttggatttgaagacactcgattaat
tagagcttgatagtgctaaagcactatgaatttcaggatttccctgaaac
acatctgatatgacctgacaatgttccccatatctttatgtctgaggcaa
attatagatttcagggcaaggggtcctgtaatagggagtgtggcattatg
tctgacagtggtgattaggaagaggacatagcttagcaaaccagctggga
agatagcttttctgctcttttaaggaattcaccctgtctttacccttttt
ctcctcccctcagtcttctttctgggacttcagaatggtcctcccctctc
ctgccatcaagtatgcaatccatttgagtttattctatcttggccaggcc
tgctagaaa
gaattctaatgctcaggacatagaggcaggggatcagtgctgcaaggcta
tcctcatttacaaagggagtcccaggccagcctgggctacatcaaactct
gtctcaaaaccaaactaacaaaaggccagagtttaagtaattaaccttgt
ttgaaatactttttgtaaatatttcatgatacactaaagtatttgcatac
taaaatggacattgctttacttgagacatttgaaaagtgtctaggcattt
tcttaattgaaaacattgggaggacaggtgtccgcctggcttgggaggcg
gcctcagcctcagcagcagcagtcgccatcttggttccaggaatccgcgg
gacctaggaaattagtctgaacaggtgagagggtgcgccagagaaccgga
cagcttctgggacgagcagaagcacagagccgctgaggcagcagcctggg
cgggccgcagacaaccggccaccatccggaccagaggacaggtgtccgcc
tggctcgggagacggcctcagcctcagcagcagtggtcgccatctgggtt
ccgggactccgcgggacctaggaaattagtctgaacaggttagagggtgc
gccagagaaccggacagcttctgggaaaggcagaagcacagagccgctga
ggcagcagcctgggcgggccgcagacaaccggccaccatccagaccagag
gacaggtgtccgcctggctcgggagatggcctcagcctcaggagcagcgg
tcaccatcttggttccaggactccctggaactttggattttagtctgcac
aggtgagagtctgcaccacagaaactgacagcttctgggaactgccaaaa
caacacagcttctaagaaaggccctgttttgggtcttctttctttgacca
ggagaggtccaaaaacaagatatctgcgcacctttctctgtagagagctt
gccagcagagagtgctctgagcactgaaactcagaaggagagaatctgtc
tcccaggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7453995_7455143
seq2: B6Ng01-274K19.b_44_1202 (reverse)

seq1  TTTCTAGCAGACCCTGC--AGATAG-ATAAAAACAAATGAATTTGCATAC  47
      |||||||||| ||  ||  |||||| |||||  |||||| | ||||||||
seq2  TTTCTAGCAGGCCTGGCCAAGATAGAATAAACTCAAATGGA-TTGCATAC  49

seq1  TTGATGGCCCAGGAGAGGGGA-GACCATTCTG-AGTCCCAAGAAGAAGAC  95
      |||||||  |||||||||||| |||||||||| |||||||  ||||||||
seq2  TTGATGG--CAGGAGAGGGGAGGACCATTCTGAAGTCCCAGAAAGAAGAC  97

seq1  TGAG----GGAGAGAAAAGGTAAAGACAGGGTGAA-TCCCTAAAAGAGCA  140
      ||||    ||||| ||| ||||||||||||||||| ||| ||||||||||
seq2  TGAGGGGAGGAGAAAAAGGGTAAAGACAGGGTGAATTCCTTAAAAGAGCA  147

seq1  GAAAAGCTATCTT-CCAGCTGGTTTGCTAAGCTATGTCCTCTTCCTAATC  189
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTATCTTCCCAGCTGGTTTGCTAAGCTATGTCCTCTTCCTAATC  197

seq1  ACCACTGTCAGACAT-ATGCCACACTCCCTATTACAGGACCCCTTGCCCT  238
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACCACTGTCAGACATAATGCCACACTCCCTATTACAGGACCCCTTGCCCT  247

seq1  GAAATCTATAATTTGCCTCAGACATAAAGATATGGGGAACATTGTCAGGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTATAATTTGCCTCAGACATAAAGATATGGGGAACATTGTCAGGT  297

seq1  CATATCAGATGTGTTTCAGGGAAATCCTGAAATTCATAGTGC-TTAGCAC  337
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATATCAGATGTGTTTCAGGGAAATCCTGAAATTCATAGTGCTTTAGCAC  347

seq1  TATCAAGCTCTAATTAATCGAGTGTCTTCAAATCCAAAGTGTCTGAGTCC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGCTCTAATTAATCGAGTGTCTTCAAATCCAAAGTGTCTGAGTCC  397

seq1  TCACCACATGACATGACCAGGGAAGCATCCTTCTCTGTTCTTTTCATCAG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACATGACATGACCAGGGAAGCATCCTTCTCTGTTCTTTTCATCAG  447

seq1  AGACTCAAGTTACCTACAGTAATCTGGAAGATGAAGTGTTTCAACTCCCT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAAGTTACCTACAGTAATCTGGAAGATGAAGTGTTTCAACTCCCT  497

seq1  TCCATGAAAGGAATAACACACTGATATTCCCATAGTGCCCACTCCTGGCA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAAAGGAATAACACACTGATATTCCCATAGTGCCCACTCCTGGCA  547

seq1  TTCTTTGCCACTCAAATTGAAATTAAATAGCTCCCAGAAAAGTAGCTGCA  587
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGCACTCAAATTGAAATTAAATAGCTCCCAGAAAAGTAGCTGCA  597

seq1  GGTTGGTCAATTCCTGGCTCTGTCAAACTAATCATCAGAAATTCTTGACT  637
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTCAATTCCTGGCTCTGTCAAACTAATCATCAGAAATTCTTGACT  647

seq1  CTTTGACATTGGCAAAGTCCAAGGCTTCAGCTTGTAAGACCTACTCCTGG  687
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTTGACATTGGCAAAGTCCAAGGCTTCAGCTTGTAAGACATACTCCTGG  697

seq1  AAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGATCCCCAACTCTGCCCA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGATCCCCAACTCTGCCCA  747

seq1  GGACTCACTGTGCCTTCTCCAGAATGATTTCCTTCTTCCTTTTTCATGAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCACTGTGCCTTCTCCAGAATGATTTCCTTCTTCCTTTTTCATGAG  797

seq1  AAAGGATTCCCTCTTCCTTCTTTGTTGGTCTGGTGTCTCCTTCATCGCCA  837
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTCCCTCCTCCTTCTTTGTTGGTCTGGTGTCTCCTTCATCGCCA  847

seq1  TTCTCTTTCTGACATAGCCTGAGCAGCCAGGAAAACATTCCTGCTGGTGA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCTGACATAGCCTGAGCAGCCAGGAAAACATTCCTGCTGGTGA  897

seq1  TCCCAGAGCAAACAGAAGGGATGAACCACAGGCAGTTGCTGTCACCACAA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGCAAACAGAAGGGATGAACCACAGGCAGTTGCTGTCACCACAA  947

seq1  CACAGGTGACAACACAGAAGATTCTAGTTCTCTCCTAGATACAAGAGATT  987
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGACAACACAGAAGATTCTAGTTCTCTCCTAGATACAAGAGATT  997

seq1  CTCCAAGGAAGGCATTACTGATGATGTCACTAGCAACTTCCATGATCTAC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGAAGGCATTACTGATGATGTCACTAGCAACTTCCATGATCTAC  1047

seq1  CTGCTAACTAGTTCTCCCCAACTTGGTCCTTTTCTGGGGTGCCTCTCCTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAACTAGTTCTCCCCAACTTGGTCCTTTTCTGGGGTGCCTCTCCTG  1097

seq1  GAGCCTCTCATGGACCCGTGGAATCCCCTTTGGAAACCTCTCCTTCCAAA  1137
      ||||||||||||||||||||  |||||| |||| |||||||||| |||||
seq2  GAGCCTCTCATGGACCCGTGTGATCCCCGTTGGCAACCTCTCCTCCCAAA  1147

seq1  GCTGGAGAATTC  1149
      ||||||||||||
seq2  GCTGGAGAATTC  1159

seq1: chr14_7306266_7306533
seq2: B6Ng01-274K19.g_66_333

seq1  GAATTCTAATGCTCAGGACATAGAGGCAGGGGATCAGTGCTGCAAGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATTCTAATGCTCAGGACATAGAGGCAGGGGATCAGTGCTGCAAGGCTA  50

seq1  TCCTCATTTACAAAGGGAGTCCCAGGCCAGCCTGGGATACATCAAACTCT  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTCATTTACAAAGGGAGTCCCAGGCCAGCCTGGGCTACATCAAACTCT  100

seq1  GTCTCAAAACCAAACTAACAAAAGGCCAGAGTTTAAGTAATTAACCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAACCAAACTAACAAAAGGCCAGAGTTTAAGTAATTAACCTTGT  150

seq1  TTGAAATACTTTTTGTAAATATTTCATGATACACTAAAGTATTTGCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATACTTTTTGTAAATATTTCATGATACACTAAAGTATTTGCATAC  200

seq1  TAAAATGGACATTGCTTTACTTGAGACATTTGAAAAGTCTCTAGGCATTT  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAAATGGACATTGCTTTACTTGAGACATTTGAAAAGTGTCTAGGCATTT  250

seq1  TCTTAATTGAAAACATTG  268
      ||||||||||||||||||
seq2  TCTTAATTGAAAACATTG  268