BAC Information

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BAC

Clone NameB6Ng01-274M11
Chromosome14 (Build37)
Map Location 50,347,315 - 50,348,318
singlet/doubletsinglet
Overlap gene3632451O06Rik
Upstream geneLOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream geneLOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274M11.bB6Ng01-274M11.g
ACCGA075994GA075995
length1,1801,005
definitionB6Ng01-274M11.b B6Ng01-274M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatttccaagatataaggtacaatttgctaaacacatgaaatcaaga
agaatgaagactgaagtgtggatactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcataccctagcaagattttattgaaag
gacccagatgtagctctctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagaacccaaggagctaaagggatctgcaacccta
tagtgacacatatgactaaccagtaccccagagctctgactctagctgca
tatgtaacaaagatggctatcgtcatcactgcaaagagaggtccatgaca
gtaactttgttatgcccagtacaggatggcaaggcaaagggatgggtgtt
aaggcatgctcccctagcatctgtgatcgt
gaattcaagtctagcctaggctatgtgagagtcagtctcataaagtatgg
acaggggtaggtgggaggcttcaaaaagttcaggaaatgttttaaaccag
aagggaatcttagaagaggaccaatatggtcacctctccataagaaaaat
gaaaaaacaacttactacatcctaagttaaaatcatgcattctatgtaag
ttactgattataaaatttaacattaatattaaagtcatatatgctacaaa
tgcatgcacaatttcaaaccatctaaatgcaaaataatttgtattgaaag
gctggccaacaatatagctaagtgaatgaagatgcttgctgccaagcctg
aaaccttagttggattcctgtaacccacatggtagaaagagagaacagag
aacaaagtccagtaagttatcctctgacttctacacatgctcagtaggac
tcatgagtacacacacacacagacacacacagacacacacacacactgag
acacacataccccacaaataaaaaaatcaaaggaaaataccatcgcaaaa
atctcagacacttctgaactgaggcaaggtggggtttcgtcttagcctct
gaactttccctgtcaaaatgaaggttttcaagcctttatcctcagtgtta
cattaccacaggaagcacaatgcaacaggtaagcactttactctgtaact
aaataataatctgaaaatttaaaacaaaacaaaatcttttagttcttttt
attttcaagtcccaaaaaatgactgtcttcaaactgattataaacattga
tttcacacgtgtggacgtgatggggtggaatttcctttattgccctccca
gcagaagaactctgttgctaaaggaaaagctcttgcagtatggcgtgact
tatgtttccactattaactctacatacagttttgcatgaaacttgctggg
caacagacactgtctccacctgaagcatgttgtagcctgaactaactttc
ttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50347315_50348318
seq2: B6Ng01-274M11.g_65_1069

seq1  GAATTCAAGTCTAGCCTAGGCTATGTGAGAGTCAGTCTCATAAAGTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCTAGCCTAGGCTATGTGAGAGTCAGTCTCATAAAGTATGG  50

seq1  ACAGGGGTAGGTGGGAGGCTTCAAAAAGTTCAGGAAATGTTTTAAACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGTAGGTGGGAGGCTTCAAAAAGTTCAGGAAATGTTTTAAACCAG  100

seq1  AAGGGAATCTTAGAAGAGGACCAATATGGTCACCTCTCCATAAGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATCTTAGAAGAGGACCAATATGGTCACCTCTCCATAAGAAAAAT  150

seq1  GAAAAAACAACTTACTACATCCTAAGTTAAAATCATGCATTCTATGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACAACTTACTACATCCTAAGTTAAAATCATGCATTCTATGTAAG  200

seq1  TTACTGATTATAAAATTTAACATTAATATTAAAGTCATATATGCTACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATTATAAAATTTAACATTAATATTAAAGTCATATATGCTACAAA  250

seq1  TGCATGCACAATTTCAAACCATCTAAATGCAAAATAATTTGTATTGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCACAATTTCAAACCATCTAAATGCAAAATAATTTGTATTGAAAG  300

seq1  GCTGGCCAACAATATAGCTAAGTGAATGAAGATGCTTGCTGCCAAGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCAACAATATAGCTAAGTGAATGAAGATGCTTGCTGCCAAGCCTG  350

seq1  AAACCTTAGTTGGATTCCTGTAACCCACATGGTAGAAAGAGAGAACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTAGTTGGATTCCTGTAACCCACATGGTAGAAAGAGAGAACAGAG  400

seq1  AACAAAGTCCAGTAAGTTATCCTCTGACTTCTACACATGCTCAGTAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTCCAGTAAGTTATCCTCTGACTTCTACACATGCTCAGTAGGAC  450

seq1  TCATGAGTACACACACACACAGACACACACAGACACACACACACACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTACACACACACACAGACACACACAGACACACACACACACTGAG  500

seq1  ACACACATACCCCACAAATAAAAAAATCAAAGGAAAATACCATCGCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACCCCACAAATAAAAAAATCAAAGGAAAATACCATCGCAAAA  550

seq1  ATCTCAGACACTTCTGAACTGAGGCAAGGTGGGGTTTCGTCTTAGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGACACTTCTGAACTGAGGCAAGGTGGGGTTTCGTCTTAGCCTCT  600

seq1  GAACTTTCCCTGTCAAAATGAAGGTTTTCAAGCCTTTATCCTCAGTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCCCTGTCAAAATGAAGGTTTTCAAGCCTTTATCCTCAGTGTTA  650

seq1  CATTACCACAGGAAGCACAATGCAACAGGTAAGCACTTTACTCTGTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCACAGGAAGCACAATGCAACAGGTAAGCACTTTACTCTGTAACT  700

seq1  AAATAATAATCTGAAAATTTAAAACAAAACAAAATCTTTTAGTTCTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAATCTGAAAATTTAAAACAAAACAAAATCTTTTAGTTCTTTTT  750

seq1  ATTTTCAAGTCCCAAAAAATGACTGTCTTCAAACTGATTATAAACATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAGTCCCAAAAAATGACTGTCTTCAAACTGATTATAAACATTGA  800

seq1  TTTCACACGTGTGGACGTGATGGGGTGGAATTTCCTTTATTGCCCTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACGTGTGGACGTGATGGGGTGGAATTTCCTTTATTGCCCTCCCA  850

seq1  GCAGAAGAACTCTGTTGCT-AAGGAAAAGCTCTTGCAGTATGGCGTGACT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCAGAAGAACTCTGTTGCTAAAGGAAAAGCTCTTGCAGTATGGCGTGACT  900

seq1  TATGTTTCCACTATTAACTCTACATACAGTTTTGCATGAAACTTGCT-GG  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATGTTTCCACTATTAACTCTACATACAGTTTTGCATGAAACTTGCTGGG  950

seq1  CAACAGACACTGTCTCCACCTGAAGCATGTTGTAGGCCTGAAACTAACTT  998
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  CAACAGACACTGTCTCCACCTGAAGCATGTTGTA-GCCTG-AACTAACTT  998

seq1  T-TTCTT  1004
      | |||||
seq2  TCTTCTT  1005