BAC Information

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BAC

Clone NameB6Ng01-275N09
Chromosome14 (Build37)
Map Location 22,036,921 - 22,202,432
singlet/doubletdoublet
Overlap geneAdk
Upstream geneLOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275N09.bB6Ng01-275N09.g
ACCGA076769GA076770
length1,1241,162
definitionB6Ng01-275N09.b B6Ng01-275N09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,036,921 - 22,037,737)(22,201,276 - 22,202,432)
sequence
gaattctttgttcaactctgagccccattttttaatggggttatttgatt
ctctggagtccaccttcttgagttctttagatatattggatattagtccc
ctgtctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttta
tgaggtcccatttatcgattctcgatcttatagcacaagccattgctgtt
ctattcaggaatttttcccctgtactgatatcttcaaggtctttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattccc
attctacatgataaccaccagttgtgccagcaccatttgttgaaaatgtt
gtcttttttccactggatggttttacctcccttgtcaaagatcaagtgac
cataggtgtgtgggttcatctctgggtcttcaattctattccattggtct
acttgtctgtcgctataccagtaccatgcagtttttatcacaattgctct
gtagtacagctttaggtcaggcatggtgattccaccagaggttcttttat
ccttgagtagagtttttgctatcctaggttttttgttattccagatgaat
ttgcagattgctctttctaattcattgaagaattgagtttgaattttgat
ggggattgcattgaatctgtagattgcttttggcaagatagccattcaca
gcattttataatgtctaaattttatatgatttttgcacaattctggctat
ttgaaatactattgaattgttcactttaaatgagcatgtaaactattgca
gaaaagctgtctaacctatatattatatgatctaatgtatatagttagat
tttatatttgtgtgatctttttcttaccataatacatgtccttgtaattt
ttatttcattcattatgtaatctgatgatatgcaaaatatttccttttac
agtgccacaccaatctcagtgaaaatctgaagtaagtggagaatctcgat
ggtggtagatgtggccttacatgg
gaattcaaggcttagcaaggatatttatctttttgggaaagtcacttaac
atgctagaatgtgtttgaaattttgctttagtttttcaatagctctcagc
actaaaaaattcaaatataaatgtgtttgaaattttgctttagtttttca
atagctctcagcactaaaaattcaaatatatatctaagcaggtataatgg
caccatgattccccttgtatccaatgcccaacgttggcaatcaacacctg
accagtcttagttcatgggatttcacttaactgccatccactgactgctt
ttgaaggaaatcttgattttgtcttttggtaagtctgtaaacaaggagga
tgagtaaatcatttctcatgtgtctctccataccccattttgttaaacag
ttacttcagtgggcacttactatcccagccggcacatggaaagctgaagc
aagagaactgctccaagtttgaggccaggctgggtacacagagattacaa
ggggagcctgggctacggaatgagaacccagactaaaatttaagaaaaaa
aatatttagactatatttaacattttatgtaaattaattttattttgcag
atctttaaagattatgctacattcaatgtacattcagctgagtactgaac
aaataaattggcttaattatattaccatttataaaagtcattaactaact
gattggatttaagatgaaccattcagaaagaattaacacttaaatttagc
ttgaatagtagctaaaatatattataaagtagcctcagattgaaaatatt
aattaactaataatatgtttgattgctagatgaaatttctattgaatttc
tatgaatggtataaaaacatacatgagatttgtcttcttgaagaaaatcc
gaggttataattagcaacccagctctttggggatctgaggcaggggatta
caaattcaaggtcagtcaaggtcagtctgggttacaacaaggaattcaaa
ggtcagtattggggtattcactggagacaattcttctaaaaattatactg
tagataaaataaaagtataagaaaataggcaggatagagctcaccaaaca
acacagcaattgtttagccatgccaaaggcataaattaggacttctagta
tgggttggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22036921_22037737
seq2: B6Ng01-275N09.b_362_1168

seq1  TCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATTTGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATTTGACC  50

seq1  TTAGTACAAGGAGATAGGAATGGATCAATTCCCATTCTACATGATAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACAAGGAGATAGGAATGGATCAATTCCCATTCTACATGATAACCA  100

seq1  CCAGTTGTGCCAGCACCATTTGTTGAAAATGTTGTCTTTTTTCCACTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTGCCAGCACCATTTGTTGAAAATGTTGTCTTTTTTCCACTGGA  150

seq1  TGGTTTTACCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTACCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTC  200

seq1  ATCTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCGCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCGCTATA  250

seq1  CCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGT  300

seq1  CAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGTAGAGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGTAGAGTTTTT  350

seq1  GCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAGATTGCTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTAGGTTTTTTGTTATTCCAGATGAATTTGCAGATTGCTCTTTC  400

seq1  TAATTCATTGAAGAATTGAGTTTGAATTTTGATGGGGATTGCATTGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATTGAAGAATTGAGTTTGAATTTTGATGGGGATTGCATTGAATC  450

seq1  TGTAGATTGCTTTTGGCAAGATAGCCATTCACAGCATTTTATAATGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTGCTTTTGGCAAGATAGCCATTCACAGCATTTTATAATGTCTA  500

seq1  AATTTTATATGATTTTTGCACAATTCTGGCTATTTGAAATACTATTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATATGATTTTTGCACAATTCTGGCTATTTGAAATACTATTGAAT  550

seq1  TGTTCACTTTAAATGAGCATGTAAACTATTGCAGAAAAGCTGTCTAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACTTTAAATGAGCATGTAAACTATTGCAGAAAAGCTGTCTAACCT  600

seq1  ATATATTTATATGATCTAATGTATATAGTTAGATTTTATATTTGTGTGAT  650
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATATA-TTATATGATCTAATGTATATAGTTAGATTTTATATTTGTGTGA-  648

seq1  TCTTTTTCTTACCATAATACATTGTTCCTTTGTAATTTTTTATTCATTTC  700
      ||||||||||||||||||||| |||  | |||||||||||  |||| |||
seq2  TCTTTTTCTTACCATAATACA-TGT--CCTTGTAATTTTTATTTCA-TTC  694

seq1  ATTATGTATATCTTGATGATATTGCAAAATATTTCCTTTTACAGTGCCAC  750
      |||||||| ||| |||||||| ||||||||||||||||||||||||||||
seq2  ATTATGTA-ATC-TGATGATA-TGCAAAATATTTCCTTTTACAGTGCCAC  741

seq1  CACCATCTCAAGTGAAAAATCTTGAAGT-AGT-GAGAATCTCG-TTGTGG  797
        | ||||| |||| |||||| |||||| ||| |||||||||| | ||||
seq2  ACCAATCTC-AGTG-AAAATC-TGAAGTAAGTGGAGAATCTCGATGGTGG  788

seq1  TAGATGTGGCTTTTACATGG  817
      ||||||||||  ||||||||
seq2  TAGATGTGGC-CTTACATGG  807

seq1: chr14_22201276_22202432
seq2: B6Ng01-275N09.g_68_1229 (reverse)

seq1  CATGCCCAACCCAATACTAGAACTCCTATTTAGGGCCTTTTGCAT-GCTA  49
      |||| ||||||| ||||||||| ||||| ||   |||||| |||| ||||
seq2  CATG-CCAACCC-ATACTAGAAGTCCTAATTTATGCCTTTGGCATGGCTA  48

seq1  AACAAGTGCTGTGT--GTTGGTGAGCTCTATCCTTGGCCTA-TTTCTTAT  96
      ||||| ||||||||   |||||||||||||||||  ||||| ||||||||
seq2  AACAATTGCTGTGTTGTTTGGTGAGCTCTATCCT--GCCTATTTTCTTAT  96

seq1  AC-TTTATTTTATCTAACAGTATA--TTTTAAGAGAA-TGTCT-CAGTGA  141
      || |||||||||||| ||||||||  |||||  |||| ||||| ||||||
seq2  ACTTTTATTTTATCT-ACAGTATAATTTTTAGAAGAATTGTCTCCAGTGA  145

seq1  ATACCCC-ATACTGACC-TTGAATTCCTTG-TGTAACCCAGACTGACCTT  188
      ||||||| ||||||||| |||||||||||| |||||||||||||||||||
seq2  ATACCCCAATACTGACCTTTGAATTCCTTGTTGTAACCCAGACTGACCTT  195

seq1  GACTGACCTTGAATTTGTAATCCCCCTGCCTCAGATCCCCAAAGAGCTGG  238
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACTGACCTTGAATTTGTAAT-CCCCTGCCTCAGATCCCCAAAGAGCTGG  244

seq1  GTTGCTAATTATAACCTCGGATTTTCTTTCAAGAAGACAAATCTCATGTA  288
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTGCTAATTATAACCTCGGATTTTC-TTCAAGAAGACAAATCTCATGTA  293

seq1  TGTTTTTATACCATTCATAGAAATTCAATAGAAATTTCATCTAGCAATCA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATACCATTCATAGAAATTCAATAGAAATTTCATCTAGCAATCA  343

seq1  AACATATTATTAGTTAATTAATATTTTCAATCTGAGGCTACTTTATAATA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTATTAGTTAATTAATATTTTCAATCTGAGGCTACTTTATAATA  393

seq1  TATTTTAGCTACTATTCAAGCTAAATTTAAGTGTTAATTCTTTCTGAATG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGCTACTATTCAAGCTAAATTTAAGTGTTAATTCTTTCTGAATG  443

seq1  GTTCATCTTAAATCCAATCAGTTAGTTAATGACTTTTATAAATGGTAATA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTTAAATCCAATCAGTTAGTTAATGACTTTTATAAATGGTAATA  493

seq1  TAATTAAGCCAATTTATTTGTTCAGTACTCAGCTGAATGTACATTGAATG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGCCAATTTATTTGTTCAGTACTCAGCTGAATGTACATTGAATG  543

seq1  TAGCATAATCTTTAAAGATCTGCAAAATAAAATTAATTTACATAAAATGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAATCTTTAAAGATCTGCAAAATAAAATTAATTTACATAAAATGT  593

seq1  TAAATATAGTCTAAATATTTTTTTTCTTAAATTTTAGTCTGGGTTCTCAT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAGTCTAAATATTTTTTTTCTTAAATTTTAGTCTGGGTTCTCAT  643

seq1  TCCGTAGCCCAGGCTCCCCTTGTAATCTCTGTGTACCCAGCCTGGCCTCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTAGCCCAGGCTCCCCTTGTAATCTCTGTGTACCCAGCCTGGCCTCA  693

seq1  AACTTGGAGCAGTTCTCTTGCTTCAGCTTTCCATGTGCCGGCTGGGATAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGAGCAGTTCTCTTGCTTCAGCTTTCCATGTGCCGGCTGGGATAG  743

seq1  TAAGTGCCCACTGAAGTAACTGTTTAACAAAATGGGGTATGGAGAGACAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCCCACTGAAGTAACTGTTTAACAAAATGGGGTATGGAGAGACAC  793

seq1  ATGAGAAATGATTTACTCATCCTCCTTGTTTACAGACTTACCAAAAGACA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGATTTACTCATCCTCCTTGTTTACAGACTTACCAAAAGACA  843

seq1  AAATCAAGATTTCCTTCAAAAGCAGTCAGTGGATGGCAGTTAAGTGAAAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGATTTCCTTCAAAAGCAGTCAGTGGATGGCAGTTAAGTGAAAT  893

seq1  CCCATGAACTAAGACTGGTCAGGTGTTGATTGCCAACGTTGGGCATTGGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAACTAAGACTGGTCAGGTGTTGATTGCCAACGTTGGGCATTGGA  943

seq1  TACAAGGGGAATCATGGTGCCATTATACCTGCTTAGATATATATTTGAAT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGGGAATCATGGTGCCATTATACCTGCTTAGATATATATTTGAAT  993

seq1  TTTTAGTGCTGAGAGCTATTGAAAAACTAAAGCAAAATTTCAAACACATT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGCTGAGAGCTATTGAAAAACTAAAGCAAAATTTCAAACACATT  1043

seq1  TATATTTGAATTTTTTAGTGCTGAGAGCTATTGAAAAACTAAAGCAAAAT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGAATTTTTTAGTGCTGAGAGCTATTGAAAAACTAAAGCAAAAT  1093

seq1  TTCAAACACATTCTAGCATGTTAAGTGACTTTCCCAAAAAGATAAATATC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACACATTCTAGCATGTTAAGTGACTTTCCCAAAAAGATAAATATC  1143

seq1  CTTGCTAAGCCTTGAATTC  1157
      |||||||||||||||||||
seq2  CTTGCTAAGCCTTGAATTC  1162