BAC Information

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BAC

Clone NameB6Ng01-276I20
Chromosome14 (Build37)
Map Location 8,613,547 - 8,614,619
singlet/doubletsinglet
Overlap geneENSMUSG00000058570
Upstream geneLOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
Downstream geneEG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276I20.bB6Ng01-276I20.g
ACCGA077307GA077308
length1,0821,182
definitionB6Ng01-276I20.b B6Ng01-276I20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatatttggaaatatattaagtaattggagaatgcacagataa
gacattaatacttgtgtagtgtagtctggtatagatactatatcatatac
gtaatgcctgctatatcatgtagtcatcacagcagatctacagatgatct
atgccattataatgtattttgtactaattattcatggcagcctgcaggca
gatgtggtggtggaggagtagctgagagttctatatcttgatttgaaggc
agccaggaagagactgtcctctacaggcaccaggaggaggaggctctttc
accctgtgtagagcccgagcataggaggagccctcaaagcttgttacaca
gtgacacacttccttcaagcaagctacacctattccaataaggctccatc
tcttaagagtgcagtgccacttcccatgggtcaagcatatacacaccatg
acaatggatatttcagtttagtcttcaggtcatgtaatttgtgcaggtaa
attatttcaggctttgtcaatattggcttttgctcttttgcatggattta
tgagtcagttttcatttaatcatgtgttacagattgtggtaattgaatac
agaacgtgctcattaaaaattaaaggttaacttccaattaaataaatcag
gaaataacatttaacatgtaaactagcctttccccagattttgttaaaat
attcaacttactcattattgtatgtctttactgtggaggtcctcatgcag
atttggacctgatggccccagtcgaaaaccagatgatagtaatattgata
ctaaggtaatattcttgtaagattagttttcttgctctacactctgcttt
tgtagtgttttctaaaactcacagttgccttcctatcaatgtttcatgtg
gagagttgatttgggggaaaatgtttgtagttgtgacatgcaaaatattt
acttttcataaattccaaattgactagttaagatactttttaaaaaaatt
atgttatgtatgtgagtacaccatctctgtcctcagacaccaccagaagg
agggccattggatcccatttgccaggatggtt
gaattctcacctgagttaataccgaaggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtccagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatccgtctggcggttcctcag
aaaattggacatagtactaccggagatccagcaatacctctcctgggcat
atatccagaagatgccccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcctgagtgaggtaacacattcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccaaaaccta
ggatacccaagatataagatacaatttcctaaacacatgaaactcaataa
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacacccttggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatgtaatttctgccttatccagggatccagcccataatcag
catcaaaacgctgacaccattgcatacactagcaagattttattgaaagg
acccagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgcccacagttcagcaaatggatggatcacagggctcccaa
atgggaggagctagagaaagtacccaagagctaagggatctgcaacccta
taggtggatcaacattatgaactaccagtaccccggagctcttgactcta
gctgcatatgtatcaaaagatgcccagtcgacatccatgcaaagaagagt
caatgacacacaaccttttatatgccataacggcaacgctcaagtcaatg
cggagtggccggtttaagggtgaatgctgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8613547_8614619
seq2: B6Ng01-276I20.b_44_1125 (reverse)

seq1  AACCAT-CTG--CAATGGGATCCAAT-GCCCT-CTTCTGGT-GTGTCTGA  44
      |||||| |||   ||||||||||||| ||||| |||||||| ||||||||
seq2  AACCATCCTGGCAAATGGGATCCAATGGCCCTCCTTCTGGTGGTGTCTGA  50

seq1  GGACAGAGATGGTGTACTCACATACATAACATAATTTTTTTTAAAAAGTA  94
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGACAGAGATGGTGTACTCACATACATAACATAA-TTTTTTTAAAAAGTA  99

seq1  TCTT-ACTAGTC-ATTTGGAATTTATG-AAAGTAAATA-TATGCATGTCA  140
      |||| ||||||| |||||||||||||| |||||||||| | |||||||||
seq2  TCTTAACTAGTCAATTTGGAATTTATGAAAAGTAAATATTTTGCATGTCA  149

seq1  CAACTACAAACATTTTCCCCCAAATCAACTCTCCACATGAAACATTGATA  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACAAACATTTTCCCCCAAATCAACTCTCCACATGAAACATTGATA  199

seq1  GGAAGGCAACTGTGAGTTTTAGAAAACACTACAAAAGCAGAGTGTAGAGC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAACTGTGAGTTTTAGAAAACACTACAAAAGCAGAGTGTAGAGC  249

seq1  AAGAAAACTAATCTTACAAGAATATTACCTTAGTATCAATATTACTATCA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACTAATCTTACAAGAATATTACCTTAGTATCAATATTACTATCA  299

seq1  TCTGGTTTTCGACTGGGGCCATCAGGTCCAAATCTGCATGAGGACCTCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTTCGACTGGGGCCATCAGGTCCAAATCTGCATGAGGACCTCCA  349

seq1  CAGTAAAGACATACAATAATGAGTAAGTTGAATATTTTAACAAAATCTGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGACATACAATAATGAGTAAGTTGAATATTTTAACAAAATCTGG  399

seq1  GGAAAGGCTAGTTTACATGTTAAATGTTATTTCCTGATTTATTTAATTGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCTAGTTTACATGTTAAATGTTATTTCCTGATTTATTTAATTGG  449

seq1  AAGTTAACCTTTAATTTTTAATGAGCACGTTCTGTATTCAATTACCACAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACCTTTAATTTTTAATGAGCACGTTCTGTATTCAATTACCACAA  499

seq1  TCTGTAACACATGATTAAATGAAAACTGACTCATAAATCCATGCAAAAGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACACATGATTAAATGAAAACTGACTCATAAATCCATGCAAAAGA  549

seq1  GCAAAAGCCAATATTGACAAAGCCTGAAATAATTTACCTGCACAAATTAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGCCAATATTGACAAAGCCTGAAATAATTTACCTGCACAAATTAC  599

seq1  ATGACCTGAAGACTAAACTGAAATATCCATTGTCATGGTGTGTATATGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGAAGACTAAACTGAAATATCCATTGTCATGGTGTGTATATGCT  649

seq1  TGACCCATGGGAAGTGGCACTGCACTCTTAAGAGATGGAGCCTTATTGGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCATGGGAAGTGGCACTGCACTCTTAAGAGATGGAGCCTTATTGGA  699

seq1  ATAGGTGTAGCTTGCTTGAAGGAAGTGTGTCACTGTGTAACAAGCTTTGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGTAGCTTGCTTGAAGGAAGTGTGTCACTGTGTAACAAGCTTTGA  749

seq1  GGGCTCCTCCTATGCTCGGGCTCTACACAGGGTGAAAGAGCCTCCTCCTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTCCTATGCTCGGGCTCTACACAGGGTGAAAGAGCCTCCTCCTC  799

seq1  CTGGTGCCTGTAGAGGACAGTCTCTTCCTGGCTGCCTTCAAATCAAGATA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTGTAGAGGACAGTCTCTTCCTGGCTGCCTTCAAATCAAGATA  849

seq1  TAGAACTCTCAGCTACTCCTCCACCACCACATCTGCCTGCAGGCTGCCAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTCTCAGCTACTCCTCCACCACCACATCTGCCTGCAGGCTGCCAT  899

seq1  GAATAATTAGTACAAAATACATTATAATGGCATAGATCATCTGTAGATCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTAGTACAAAATACATTATAATGGCATAGATCATCTGTAGATCT  949

seq1  GCTGTGATGACTACATGATATAGCAGGCATTACGTATATGATATAGTATC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATGACTACATGATATAGCAGGCATTACGTATATGATATAGTATC  999

seq1  TATACCAGACTACACTACACAAGTATTAATGTCTTATCTGTGCATTCTCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAGACTACACTACACAAGTATTAATGTCTTATCTGTGCATTCTCC  1049

seq1  AATTACTTAATATATTTCCAAATATGTGAATTC  1073
      |||||||||||||||||||||||||||||||||
seq2  AATTACTTAATATATTTCCAAATATGTGAATTC  1082