BAC Information

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BAC

Clone NameB6Ng01-277D08
Chromosome14 (Build37)
Map Location 8,100,835 - 8,385,544
singlet/doubletdoublet
Overlap geneLOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874
Upstream geneLOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217
Downstream geneLOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277D08.bB6Ng01-277D08.g
ACCGA077788GA077789
length1,136672
definitionB6Ng01-277D08.b B6Ng01-277D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,384,408 - 8,385,544)(8,100,835 - 8,101,506)
sequence
gaattctccagctttggaaggagaagttgccaaaggggatcccacgggtc
caagagaggctccaggagaggctccccagaaaaggaccaagctgggcaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatggttatggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagctgaagccttggactttg
tcaatgtcagaaaaagagtcaagaatttctgatgattagtttgacagagc
caggaattgacaaacctgcagctactttgctgggagctatttaatttcat
tttgagtggcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tcctttcatggaagggagttgaagcacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgctcccctggtcat
gtcatgtggtgaggactcagacacattggatttgaagacactcgattaat
tagtgcttgatagtgctaagcactatgaacttcaggatttccctgcgtcc
catctgatatgacctgacatgttccccatatctttatgtctgaggcagct
tatacatttcaaggcaaccgggcctgtaacaggagtgtggcatatgtctg
acaatgggtggttaggaagaggaacatagcttagcaaaccagctggaaga
tagcttttctgcttcttttaggaatcactgtcttatctttttctctccct
catcttcttcctgggactcagaatgggtctccctgcccctgggcaatcaa
gtatgcaattcctttgtgtttaccttatctggcagg
gaattctttatatattttggatattggccatgcattggatggggagttgg
taaacattatttccgaatatgtagcttgccaatttgtcctattggctatg
ccctttgtcttatagaagcttttcagtttcttgtggcccatttataaatt
tttgatgttagaacctgagctattggagttccgtttatgatatttatccc
cattcccatcagtttgaggctctttcctgctttctcttccattagattca
ttggggatttggctgcactgatgaatctgcctttagttttagcttcaata
gctgcttggctggactttttggtccttgagttcataagccttctgctttg
gtgtggaaattctggagttgcttgagaccattctgatcatcacccctaaa
agagagagaagccttgcatattatcaggtttattctggccaaaatgcaga
agagtatatttctcttgtcttattttgaaaggacagctgactatctctct
gatgcttattttctggatggaaagacttcctatgcaataggtctgcagtg
tcaaagacatataggttaaaatactcatagatgttttttgtttcaccact
caaccaaggcatactatgctttcttttctctcttctctcttctttctcct
ccctcctctctcctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8384408_8385544
seq2: B6Ng01-277D08.b_46_1181 (reverse)

seq1  CCTG-CAGAT-AGGTAAACACAAAAGAATTTGCATACTTGATGGCCCAGG  48
      |||| ||||| ||||||||||||| ||| ||||||||||||| |||||||
seq2  CCTGCCAGATAAGGTAAACACAAAGGAA-TTGCATACTTGATTGCCCAGG  49

seq1  GGCAGGGGAGA-CCATTCTGAGTCCCAAGAAGAAGATGGAGGGAGAG-AA  96
      |||| |||||| ||||||||||||||| ||||||||| ||||||||| ||
seq2  GGCA-GGGAGACCCATTCTGAGTCCCAGGAAGAAGAT-GAGGGAGAGAAA  97

seq1  AAGATAAAGACAGTGAATTCCTAAAAG-AGCAGAAAAGCTATCTTCCAGC  145
      ||||| ||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AAGAT-AAGACAGTG-ATTCCTAAAAGAAGCAGAAAAGCTATCTTCCAGC  145

seq1  TGGTTTGCTAAGCTATGTTCCTCTTCCTAACCA-CCATTGTCAGACATAT  194
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGTTTGCTAAGCTATGTTCCTCTTCCTAACCACCCATTGTCAGACATAT  195

seq1  GCCACACTCCCTGTTACAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCT  244
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACT-CCTGTTACAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCT  244

seq1  CAGACATAAAGATATGGGGAACATTGTCAGGTCATATCAGATGGGACGCA  294
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGACATAAAGATATGGGGAACA-TGTCAGGTCATATCAGATGGGACGCA  293

seq1  GGGAAATCCTGAAGTTCATAGTGCTTAGCACTATCAAGCACTAATTAATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCCTGAAGTTCATAGTGCTTAGCACTATCAAGCACTAATTAATC  343

seq1  GTGTGTCTTCAAATCCAAAGTGTCTGAGTCCTCACCACATGACATGACCA  394
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGTGTCTTCAAATCCAATGTGTCTGAGTCCTCACCACATGACATGACCA  393

seq1  GGGGAGCATCCTTCTCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCATCCTTCTCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAG  443

seq1  TAATCTGGAAGATGAAGTGCTTCAACTCCCTTCCATGAAAGGACACACTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGGAAGATGAAGTGCTTCAACTCCCTTCCATGAAAGGACACACTG  493

seq1  TTATTCTCATAGTGCCCACTCCTGACATTTTTTGCCACTCAAAATGAAAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCATAGTGCCCACTCCTGACATTTTTTGCCACTCAAAATGAAAT  543

seq1  TAAATAGCTCCCAGAAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGT  594
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAAATAGCTCCCAGCAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGT  593

seq1  CAAACTAATCATCAGAAATTCTTGACTCTTTTTCTGACATTGACAAAGTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAATCATCAGAAATTCTTGACTCTTTTTCTGACATTGACAAAGTC  643

seq1  CAAGGCTTCAGCTTGTAAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTCAGCTTGTAAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTA  693

seq1  CCTCTACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTC  743

seq1  CAGAACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTT  794
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTT  793

seq1  CTCTGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCC  843

seq1  TGAGCAGCCAGGAAAACATTCCTGCTGGTGAACCCAGAGCAAACAGAAGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCCAGGAAAACATTCCTGCTGGTGAACCCAGAGCAAACAGAAGG  893

seq1  GATGAACCACAGGCAGTTGCTGTCACCACAACACAGGTGACAACACAGAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACCACAGGCAGTTGCTGTCACCACAACACAGGTGACAACACAGAA  943

seq1  GATTCTAGTTCTATCCTAGATACAAGAGATTCTCCAAGGAAGGCATTACT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGTTCTATCCTAGATACAAGAGATTCTCCAAGGAAGGCATTACT  993

seq1  GATGATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTGCCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTGCCC  1043

seq1  AGCTTGGTCCTTTTCTGGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGT  1094
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  AGCTTGGTCCTTTTCTGGGGAGCCTCTCCTGGAGCCTCTCTTGGACCCGT  1093

seq1  GGGATCCCCTTTAGCAACCTCTCCTTCCAAAGCTGGAGAATTC  1137
      |||||||||||| ||||| ||||||||||||||||||||||||
seq2  GGGATCCCCTTTGGCAACTTCTCCTTCCAAAGCTGGAGAATTC  1136

seq1: chr14_8100835_8101506
seq2: B6Ng01-277D08.g_64_735

seq1  GAATTCTTTATATATTTTGGATATTGGCCATGCATTGGATGGGGAGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATATTTTGGATATTGGCCATGCATTGGATGGGGAGTTGG  50

seq1  TAAACATTATTTCCGAATATGTAGCTTGCCAATTTGTCCTATTGGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTATTTCCGAATATGTAGCTTGCCAATTTGTCCTATTGGCTATG  100

seq1  CCCTTTGTCTTATAGAAGCTTTTCAGTTTCTTGTGGCCCATTTATAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTCTTATAGAAGCTTTTCAGTTTCTTGTGGCCCATTTATAAATT  150

seq1  TTTGATGTTAGAACCTGAGCTATTGGAGTTCCGTTTATGATATTTATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTTAGAACCTGAGCTATTGGAGTTCCGTTTATGATATTTATCCC  200

seq1  CATTCCCATCAGTTTGAGGCTCTTTCCTGCTTTCTCTTCCATTAGATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCATCAGTTTGAGGCTCTTTCCTGCTTTCTCTTCCATTAGATTCA  250

seq1  TTGGGGATTTGGCTGCACTGATGAATCTGCCTTTAGTTTTAGCTTCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATTTGGCTGCACTGATGAATCTGCCTTTAGTTTTAGCTTCAATA  300

seq1  GCTGCTTGGCTGGACTTTTTGGTCCTTGAGTTCATAAGCCTTCTGCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGGCTGGACTTTTTGGTCCTTGAGTTCATAAGCCTTCTGCTTTG  350

seq1  GTGTGGAAATTCTGGAGTTGCTTGAGACCATTCTGATCATCACCCCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAATTCTGGAGTTGCTTGAGACCATTCTGATCATCACCCCTAAA  400

seq1  AGAGAGAGAAGCCTTGCATATTATCAGGTTTATTCTGGCCAAAATGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAGCCTTGCATATTATCAGGTTTATTCTGGCCAAAATGCAGA  450

seq1  AGAGTATATTTCTCTTGTCCTATTTTGAAAGGACAGATGACTATCTCTCT  500
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  AGAGTATATTTCTCTTGTCTTATTTTGAAAGGACAGCTGACTATCTCTCT  500

seq1  GATGCTTATTTTCTGGATGGAAAGACTTCCTATGCAATAGGTCTGCAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTATTTTCTGGATGGAAAGACTTCCTATGCAATAGGTCTGCAGTG  550

seq1  TCAAAGACATATAGGTTAAAATACTCATAGATGTTTTTTGTTTCACCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACATATAGGTTAAAATACTCATAGATGTTTTTTGTTTCACCACT  600

seq1  CAACCAAGGCATACTATGCTTTCTTTTCTCTCTTCTCTCTTCTTTCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAGGCATACTATGCTTTCTTTTCTCTCTTCTCTCTTCTTTCTCCT  650

seq1  CCCTCCTCTCTCCTCTCTCTCT  672
      ||||||||||||||||||||||
seq2  CCCTCCTCTCTCCTCTCTCTCT  672