BAC Information

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BAC

Clone NameB6Ng01-277E09
Chromosome14 (Build37)
Map Location 73,216,492 - 73,217,615
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668477, LOC668482, LOC675957, Fndc3a
Downstream geneLOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277E09.bB6Ng01-277E09.g
ACCGA077836GA077837
length1,1161,173
definitionB6Ng01-277E09.b B6Ng01-277E09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaaaaattaagtaaagaaagaaaacgctaaatctaggtcttc
ctgtctgtttctcaggcgtgccccctttcatgccgttctaagaacctcac
aatttctagtgtatcaagtataagttattcacgtttactaaagtagcagg
tgtgatgtcgcctctcctcggcaacaagagagttgaggatgtgactgatc
cctcaatgcaaccaacaagcaaacggttaagtctcagatcgtggctggga
aacaactctcttgggttctgtgttttccacccctgctcacctcctcctcc
aggtgtcttactttcctttcgttcacttcggaaataaacgtttcctggtg
ggtaattataaaggaaaaaaaaattagaaatgtgatcagaaattagataa
aacccataattttcccccttctttttgtttttgtcttctttctccccgtc
ccttaaacaggtagctgttacgaagactgatgtagcatttatgaaattcg
ggagaggaaaatattgcataaaaaagtcagaatgtttagtagtgaggaac
aatcacagtttgtacctatgcttgctagaaagaacataaaggattcctaa
tcctgaagtcaccattaatcccggctgaagcctcccttgcagctgccttt
attcctccactaagagctcccgagggttctagctactccgttgctgtggc
gaccactgcagccacttgctcatttcagctaaaaaacatattcaagttgt
cagaccatgccaccagctgagcttggctcagaacagtaaggtcgctgaca
ttgtcttctcaaaacagcctatcaatcaagcacactgctgtaagagaaag
ttcagacggtgttgctgtccaatataagagccgctggggtctcaggcatg
gcaacggcctcggccatctcatttagagccgaaacctcaattttacagcc
agaaagttggttctggtggggtacgtagagacattgaatgctggggggtg
tggtttaaactccacaaaatataatataggaacagaatgcctgctgtaat
ttataaatgtgatcagtgatctagaattcccatgtacatggacagcgagt
tgaatttgtgtaacat
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgcgat
tccatctcacaccagtcagaatggctaagataaaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagagcaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccctcaatacctctcctggg
cttatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaagtaaggaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacacaatcacaa
aagaactcaaatgatatgtactcactgataagtggatattagctcagaaa
cttagtatacccgagatataagatacaatttgcaagacacatgaaactga
agaagaacgaagaccaaagtgtggacactttgccccttcttagaattgga
aacaatcgcccatggaaggagttacacagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccatcccataat
tagcctccaaacgatgacaccattgcatacactagcaagattttgctgaa
aggaccctgatatagctgtctcttgtgagactaggccgggtcctagcaaa
cacataagtggatgctcacagtcagctattggatggagcacaggtcccca
atgcaggagctagagaaagtatccaggagctaaagagatctgcaactctg
caacaacagtatgactaaccagtaccccgagcttcttgactctagctgca
ttattgtatcaaagatgcttagttcgtcatcactggaagagagtccaatt
gcacttggcaactttaatgccagttacaggcttgccagtccgaaattggc
attccagttgtgatatatactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73216492_73217615
seq2: B6Ng01-277E09.b_44_1159 (reverse)

seq1  ATGTTACACAAAT--CACTTGCTGTCCATTGTACATGGAAATCCTAGAAT  48
      |||||||||||||   ||| |||||||| ||||||||| ||| |||| ||
seq2  ATGTTACACAAATTCAACTCGCTGTCCA-TGTACATGGGAATTCTAG-AT  48

seq1  CACTGATCACATTTTAATAAAAATAACAAACAGGCATTCTGTTCCTTATA  98
      |||||||||||||    || |||| || | ||||||||||||||| ||||
seq2  CACTGATCACATT----TATAAATTAC-AGCAGGCATTCTGTTCC-TATA  92

seq1  TTATTATTTTGT-GAGTTTAACCCACACCCCCCAGCATTCAATTGTCTCT  147
      ||| |||||||| |||||||| |||||||||||||||||||| |||||||
seq2  TTA-TATTTTGTGGAGTTTAAACCACACCCCCCAGCATTCAA-TGTCTCT  140

seq1  ACGTACCCCACCAGAACCAACCTTCTGGCTGTAAAATTGAGGTTTCGGCT  197
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACGTACCCCACCAGAACCAACTTTCTGGCTGTAAAATTGAGGTTTCGGCT  190

seq1  CTAAATGAGATGGCCGAGGCCGTTGCCATGCCCTGAGACCCCAGCGGCTC  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTAAATGAGATGGCCGAGGCCGTTGCCATG-CCTGAGACCCCAGCGGCTC  239

seq1  TTATATTGGACAGCAACACCGTCTGAACTTTCTCTTACAGCAGTGTGCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGGACAGCAACACCGTCTGAACTTTCTCTTACAGCAGTGTGCTT  289

seq1  GATTGATAGGCTGTTTTGAGAAGACAATGTCAGCGACCTTACTGTTCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATAGGCTGTTTTGAGAAGACAATGTCAGCGACCTTACTGTTCTGA  339

seq1  GCCAAGCTCAGCTGGTGGCATGGTCTGACAACTTGAATATGTTTTTTAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCTCAGCTGGTGGCATGGTCTGACAACTTGAATATGTTTTTTAGC  389

seq1  TGAAATGAGCAAGTGGCTGCAGTGGTCGCCACAGCAACGGAGTAGCTAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAGCAAGTGGCTGCAGTGGTCGCCACAGCAACGGAGTAGCTAGA  439

seq1  ACCCTCGGGAGCTCTTAGTGGAGGAATAAAGGCAGCTGCAAGGGAGGCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCGGGAGCTCTTAGTGGAGGAATAAAGGCAGCTGCAAGGGAGGCTT  489

seq1  CAGCCGGGATTAATGGTGACTTCAGGATTAGGAATCCTTTATGTTCTTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGGGATTAATGGTGACTTCAGGATTAGGAATCCTTTATGTTCTTTC  539

seq1  TAGCAAGCATAGGTACAAACTGTGATTGTTCCTCACTACTAAACATTCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCATAGGTACAAACTGTGATTGTTCCTCACTACTAAACATTCTG  589

seq1  ACTTTTTTATGCAATATTTTCCTCTCCCGAATTTCATAAATGCTACATCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTATGCAATATTTTCCTCTCCCGAATTTCATAAATGCTACATCA  639

seq1  GTCTTCGTAACAGCTACCTGTTTAAGGGACGGGGAGAAAGAAGACAAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCGTAACAGCTACCTGTTTAAGGGACGGGGAGAAAGAAGACAAAAA  689

seq1  CAAAAAGAAGGGGGAAAATTATGGGTTTTATCTAATTTCTGATCACATTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAAGGGGGAAAATTATGGGTTTTATCTAATTTCTGATCACATTT  739

seq1  CTAATTTTTTTTTCCTTTATAATTACCCACCAGGAAACGTTTATTTCCGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTTTTTTCCTTTATAATTACCCACCAGGAAACGTTTATTTCCGA  789

seq1  AGTGAACGAAAGGAAAGTAAGACACCTGGAGGAGGAGGTGAGCAGGGGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACGAAAGGAAAGTAAGACACCTGGAGGAGGAGGTGAGCAGGGGTG  839

seq1  GAAAACACAGAACCCAAGAGAGTTGTTTCCCAGCCACGATCTGAGACTTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACAGAACCCAAGAGAGTTGTTTCCCAGCCACGATCTGAGACTTA  889

seq1  ACCGTTTGCTTGTTGGTTGCATTGAGGGATCAGTCACATCCTCAACTCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTTGCTTGTTGGTTGCATTGAGGGATCAGTCACATCCTCAACTCTC  939

seq1  TTGTTGCCGAGGAGAGGCGACATCACACCTGCTACTTTAGTAAACGTGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCCGAGGAGAGGCGACATCACACCTGCTACTTTAGTAAACGTGAA  989

seq1  TAACTTATACTTGATACACTAGAAATTGTGAGGTTCTTAGAACGGCATGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATACTTGATACACTAGAAATTGTGAGGTTCTTAGAACGGCATGA  1039

seq1  AAGGGGGCACGCCTGAGAAACAGACAGGAAGACCTAGATTTAGCGTTTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGCACGCCTGAGAAACAGACAGGAAGACCTAGATTTAGCGTTTTC  1089

seq1  TTTCTTTACTTAATTTTTTGAGAATTC  1124
      |||||||||||||||||||||||||||
seq2  TTTCTTTACTTAATTTTTTGAGAATTC  1116