BAC Information

Click to search

BAC

Clone NameB6Ng01-280C23
Chromosome14 (Build37)
Map Location 82,860,323 - 82,861,494
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280C23.bB6Ng01-280C23.g
ACCGA079976GA079977
length1,2441,169
definitionB6Ng01-280C23.b B6Ng01-280C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctccatgttggtggaattgcaagctggtacaatcactgtggcat
tcagtctgtaggtttttcagaaaattggacaaagtactacctgaagaccc
agctataccactcttgagtatatacccaaaagaagctccaacatgtaata
aggacacatgttctactatgttcatagcagccctaattataatagccaga
agctggaaattatccagatgcccttcaacagaggaatggatatagataat
gtgtacatttatacagtggagtactactcagctattaaaaacacaacctc
gcccttccggcccactccagcaccagggtgccttgtccactgagtgtagt
ctctggaaacccacaaggaatcacacaggattccccacaggatcctaaga
cctctggtgagtggaacacagcgtctgccccaatccaatcgcgcagaacc
tgagactgcattaactagggaagcagataacccggcctgagcaggggcac
aagtcccttccggttcactccagcagcagactaccttgtgcacggagttt
ctggacaccctcaaggtcctcacaggaccctccacgggatctgcagtaac
taggaagcagacgacccgggcctgacctggggcacgagtcccttccactc
cactcaagcaccggggtgccttgccagtggagtctcccgacatccgcaag
ggcccacacaggattccccacgggatcctaagacctctggtgagtggaac
acagcatctgccacaatccaatcgcgctgaacctgagactgcggtaacta
gggaagcagacaacccgggcctgacctggggcacgagtcccttccactcc
acttgagcacggggtgccttgccagcagagcatcccgacaccagcaaggg
cccacacaggattccccatgggatcctaagacctctggtgagtaaagcac
aacttctgccacgaggcagttcaaacaccagatatctgggtaccttccct
gcaagaagagaagattgcctgcaaagaatactctgcccactgaactacga
agaggagctagcctctcaaggtatgctataggaggctaacagaagtcacc
tggaggaaccagctctaaccaagacaaccttataaagcttagccttcgag
atttaactgaggcccaatgccaacctaggatctactaacgaatcagacac
tcacattcatagacgcagacatttctacctcacactatgatgtc
gaattcagtttctttcagagctttagtgtaagcttttaggggactatatt
taaaatgtgctgtatgctacagatttctttctttctttttttttttttct
gtaaaacattctatgattataggcagactttgttaactctgtactgtaca
ataccagcaataaccaacatggtactgtgaattctgtgataacccaaaga
aggtttcttaaaatatttgttataaaatgcaatatttttgcaaactgatg
aggaacaccaaatatgtcaacacacacagagaagtaatgatctttgacca
aaatgcccaacttttacagtgaagaatagataatcattccaacaagttac
actagaaaaacggaacactcataattctaaagttataccaataatatatt
ttaaatcatgcataaaataagtaaaatgatttaacacttgaaatcctaga
aatggtctttagggaaaagcttatgaatgtttttcttttggttttcgcat
gcttactcgagacaatgaaagctcattgacaaaaagaaattctgggtgct
acctcacacaaaataattatcacaatgattttagatgaagtagtcaaaac
agttaatgccattttagaaaaaagaagaaattgttctcaaagtatgcata
taagaataacatgttaataatcaaagttaataaataattatgtagcagaa
tagaaaaatattgaacaccaaataaaacatgggttaaggtgttagagaga
catgtctctgaagatgatgcaaaaagactttaatagcattgataagcatg
cacaaatctttttcagcttcaggaatgggtaaactaatgccccgatgcga
agttacctcaataattcatggtggttattatttttcattagaaatactat
gttaaaagggttgaataaaacatggaaattgtggtaggtaagttaatcaa
caagttagaaggaagctgccacccattctgaagtctggatttctgaattt
gctcttgatataattgtggaagagaacatacgtcactaattgtccactgc
aagtgtatacgcacacatgcatatgcataacagaacagaatgtagaaata
attcttgattcttccatctaagctcaatgctccgaacataaatatattta
ccaaataccgttggccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82860323_82861494
seq2: B6Ng01-280C23.g_66_1234

seq1  GAATTCAGTTTCTTTCAGAGCTTTAGTGTAAGCTTTTAGGGGACTATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCTTTCAGAGCTTTAGTGTAAGCTTTTAGGGGACTATATT  50

seq1  TAAAATGTGCTGTATGCTACAGATTTCTTTCTTTCTTTTTTTTTTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTGCTGTATGCTACAGATTTCTTTCTTTCTTTTTTTTTTTTTCT  100

seq1  GTAAAACATTCTATGATTATAGGCAGACTTTGTTAACTCTGTACTGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACATTCTATGATTATAGGCAGACTTTGTTAACTCTGTACTGTACA  150

seq1  ATACCAGCAATAACCAACATGGTACTGTGAATTCTGTGATAACCCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCAATAACCAACATGGTACTGTGAATTCTGTGATAACCCAAAGA  200

seq1  AGGTTTCTTAAAATATTTGTTATAAAATGCAATATTTTTGCAAACTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTTAAAATATTTGTTATAAAATGCAATATTTTTGCAAACTGATG  250

seq1  AGGAACACCAAATATGTCAACACACACAGAGAAGTAATGATCTTTGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACACCAAATATGTCAACACACACAGAGAAGTAATGATCTTTGACCA  300

seq1  AAATGCCCAACTTTTACAGTGAAGAATAGATAATCATTCCAACAAGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCAACTTTTACAGTGAAGAATAGATAATCATTCCAACAAGTTAC  350

seq1  ACTAGAAAAACGGAACACTCATAATTCTAAAGTTATACCAATAATATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAAAACGGAACACTCATAATTCTAAAGTTATACCAATAATATATT  400

seq1  TTAAATCATGCATAAAATAAGTAAAATGATTTAACACTTGAAATCCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCATGCATAAAATAAGTAAAATGATTTAACACTTGAAATCCTAGA  450

seq1  AATGGTCTTTAGGGAAAAGCTTATGAATGTTTTTCTTTTGGTTTTCGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTTTAGGGAAAAGCTTATGAATGTTTTTCTTTTGGTTTTCGCAT  500

seq1  GCTTACTCGAGACAATGAAAGCTCATTGACAAAAAGAAATTCTGGGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTCGAGACAATGAAAGCTCATTGACAAAAAGAAATTCTGGGTGCT  550

seq1  ACCTCACACAAAATAATTATCACAATGATTTTAGATGAAGTAGTCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACACAAAATAATTATCACAATGATTTTAGATGAAGTAGTCAAAAC  600

seq1  AGTTAATGCCATTTTAGAAAAAAGAAGAAATTGTTCTCAAAGTATGCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATGCCATTTTAGAAAAAAGAAGAAATTGTTCTCAAAGTATGCATA  650

seq1  TAAGAATAACATGTTAATAATCAAAGTTAATAAATAATTATGTAGCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATAACATGTTAATAATCAAAGTTAATAAATAATTATGTAGCAGAA  700

seq1  TAGAAAAATATTGAACACCAAATAAAACATGGGTTAAGGTGTTAGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATATTGAACACCAAATAAAACATGGGTTAAGGTGTTAGAGAGA  750

seq1  CATGTCTCTGAAGATGATGCAAAAAGACTTTAATAGCATTGATAAGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCTGAAGATGATGCAAAAAGACTTTAATAGCATTGATAAGCATG  800

seq1  CACAAATCTTTTTCAGCTTCAGGAATGGGTAAACTAATGCCCCGATGCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCTTTTTCAGCTTCAGGAATGGGTAAACTAATGCCCCGATGCGA  850

seq1  AGTTACCTCAATAATTCATGGTGGTTATTATTTTTCATTAGAAATACTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTCAATAATTCATGGTGGTTATTATTTTTCATTAGAAATACTAT  900

seq1  GTTAAAAGGGTTGAATAAAACATGG-AATTGTGGGTAGGTAAGTTAATCA  949
      ||||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  GTTAAAAGGGTTGAATAAAACATGGAAATTGT-GGTAGGTAAGTTAATCA  949

seq1  ACAAGTAAG-AGGAAGCTGCCACCCATTCTGAAGTCTGGATTTCTGAATT  998
      |||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTAGAAGGAAGCTGCCACCCATTCTGAAGTCTGGATTTCTGAATT  999

seq1  TGCTCCTTGGAATATAAATTGTGGAAGGAGACAATTACGTCCACTAAATT  1048
      |||| ||||  |||| |||||||||||   |||  ||||| |||| ||||
seq2  TGCT-CTTG--ATAT-AATTGTGGAAGAGAACA--TACGT-CACT-AATT  1041

seq1  GTCCACTGCAAGTGTATACGCACACATGCATATGCAT-ACAG-ACAGACA  1096
      ||||||||||||||||||||||||||||||||||||| |||| ||||| |
seq2  GTCCACTGCAAGTGTATACGCACACATGCATATGCATAACAGAACAGA-A  1090

seq1  TGTAGAAATAAATTCTGGTTCTT-CATCTAAGCTCCATGCTCCCAGACAT  1145
      ||||||||||| |  || ||||| ||||||||||| ||||||| | ||||
seq2  TGTAGAAATAATTCTTGATTCTTCCATCTAAGCTCAATGCTCCGA-ACAT  1139

seq1  -AATATATTTA-CAAATACC-TTGGCCATA  1172
       |||||||||| |||||||| |||||||||
seq2  AAATATATTTACCAAATACCGTTGGCCATA  1169