BAC Information

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BAC

Clone NameB6Ng01-282C02
Chromosome14 (Build37)
Map Location 97,278,303 - 97,279,400
singlet/doubletsinglet
Overlap geneLOC668654
Upstream gene4921530L21Rik, Klhl1, LOC100043366
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282C02.bB6Ng01-282C02.g
ACCGA081430GA081431
length1,0941,166
definitionB6Ng01-282C02.b B6Ng01-282C02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacagctccactactaagaatgactagtatcagcacacaagtaa
ccaagtactgctgggatgaggagaaggaaaagcacactggttatagggat
ctggagacctcctgtcttagtcagggtttctattcctgcacaaacatcat
gaccaagaagcaggttggagagaaaagggtttattcaccttacacttccc
tactgctgttcatcaccaaggaagtcaggactggaactcaagcaggtcag
gaagcaggtgctgatacagaggccatggagggatattcttactggcttgc
ttcccctggcttgctcagcctgctctcttgtagaaccaagactaccagcc
cagagatggcatcacccactaggggcctttcccccttggtcactaattga
gaaaatgccttacagttggatctcatggaggcatttgctcaacggaagct
cctttctctgtgataactccagctgtgtctagttgacatagactagccag
tacacctcctatgtaatgaagtcaaaagggaggatgatcagagctggaat
ggaaataacacagatgcctcatctgtcactatgaaaagacattgcttgtt
tttgtgcttgagttggtttcattctgtgttgttaatattgttagctttgt
gatcgggctgtctcactcataaaagaacttaagtgacaatagaactgaca
gttgcaatctcatttttcttttgagttcctatctgtcttataaactaggt
gcgagagctagctaaattaacctgaaaacattagaatctgtttctagtct
tgggaaccagagcagcattgtgcaatagcttgttcatttctcaaatggtt
gcagaaagtgtgagtcactaaaccatgtaatggttttaatgatgaattct
gatcatgctttcaaagcctgacactacacctctctaatgatgtgtactgt
cccttttgtacagtgtttcagacataccatgatattttaaagcacattta
accccgaaaaagccagtcatattttgacagaaaaaattcctcccatccct
ctatgtaatcatatttctgcatcagctagtcctgccatctatta
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatacaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggctcgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaagggatctgcacctat
aggtggaacacattatgagctaacagtacccggagctcttgactctagct
gcatatatatccaaaagatggcctagtcgccattcacttgcaaagaagag
cccaattggacttggcactaatgcccagtacacggaacaccaaggtcaaa
aaaagggggaaatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97278303_97279400
seq2: B6Ng01-282C02.b_46_1139

seq1  GAATTCCACAGCTCCACTACTAAGAATGACTAGTATCAGCACACAAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCTCCACTACTAAGAATGACTAGTATCAGCACACAAGTAA  50

seq1  CCAAGTACTGCTGGGATGAGGAGAAGGAAAAGCACACTGGTTATAGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACTGCTGGGATGAGGAGAAGGAAAAGCACACTGGTTATAGGGAT  100

seq1  CTGGAGACCTCCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACCTCCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCAT  150

seq1  GACCAAGAAGCAGGTTGGAGAGAAAAGGGTTTATTCACCTTACACTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAAGCAGGTTGGAGAGAAAAGGGTTTATTCACCTTACACTTCCC  200

seq1  TACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAG  250

seq1  GAAGCAGGTGCTGATACAGAGGCCATGGAGGGATATTCTTACTGGCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGTGCTGATACAGAGGCCATGGAGGGATATTCTTACTGGCTTGC  300

seq1  TTCCCCTGGCTTGCTCAGCCTGCTCTCTTGTAGAACCAAGACTACCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGCTTGCTCAGCCTGCTCTCTTGTAGAACCAAGACTACCAGCC  350

seq1  CAGAGATGGCATCACCCACTAGGGGCCTTTCCCCCTTGGTCACTAATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGGCATCACCCACTAGGGGCCTTTCCCCCTTGGTCACTAATTGA  400

seq1  GAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTGCTCAACGGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCTTACAGTTGGATCTCATGGAGGCATTTGCTCAACGGAAGCT  450

seq1  CCTTTCTCTGTGATAACTCCAGCTGTGTCTAGTTGACATAGACTAGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTGTGATAACTCCAGCTGTGTCTAGTTGACATAGACTAGCCAG  500

seq1  TACACCTCCTATGTAATGAAGTCAAAAGGGAGGATGATCAGAGCTGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTCCTATGTAATGAAGTCAAAAGGGAGGATGATCAGAGCTGGAAT  550

seq1  GGAAATAACACAGATGCCTCATCTGTCACTATGAAAAGACATTGCTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAACACAGATGCCTCATCTGTCACTATGAAAAGACATTGCTTGTT  600

seq1  TTTGTGCTTGAGTTGGTTTCATTCTGTGTTGTTAATATTGTTAGCTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTGAGTTGGTTTCATTCTGTGTTGTTAATATTGTTAGCTTTGT  650

seq1  GATCGGGCTGTCTCACTCATAAAAGAACTTAAGTGACAATAGAACTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGGCTGTCTCACTCATAAAAGAACTTAAGTGACAATAGAACTGACA  700

seq1  GTTGCAATCTCATTTTTCTTTTGAGTTCCTATCTGTCTTATAAACTAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATCTCATTTTTCTTTTGAGTTCCTATCTGTCTTATAAACTAGGT  750

seq1  GCGAGAGCTAGCTAAATTAACCTGAAAACATTAGAATCTGTTTCTAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGCTAGCTAAATTAACCTGAAAACATTAGAATCTGTTTCTAGTCT  800

seq1  TGGGAACCAGAGCAGCATTGTGCAATAGCTTGTTCATTTCTCAAATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACCAGAGCAGCATTGTGCAATAGCTTGTTCATTTCTCAAATGGTT  850

seq1  GCAGAAAGTGTGAGTCACTAAACCATGTAATGGTTTTAATGATGAATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGTGTGAGTCACTAAACCATGTAATGGTTTTAATGATGAATTCT  900

seq1  GATCATGCTTTCAAAGCCTGACACTACACCTCTCTAATGATGTGTACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGCTTTCAAAGCCTGACACTACACCTCTCTAATGATGTGTACTGT  950

seq1  CCCTTTTGTACAGTGTTTCAGACATACCATGATATTTTAAAGCACATTTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGTACAGTGTTTCAGACATACCATGATATTTTAAAGCACATTTA  1000

seq1  ACCCCGAAAAAGCCAGTCATTAATTTGACAG-AAAAATTC--TCCATCCC  1047
      ||||||||||||||||||| || |||||||| ||||||||   |||||||
seq2  ACCCCGAAAAAGCCAGTCA-TATTTTGACAGAAAAAATTCCTCCCATCCC  1049

seq1  TTCTTATGTAAATCATAATTTCTGCATCAGGCTAGTCCTGGCAATCTATT  1097
      |   ||||| |||||| |||||||||||| ||||||||| || |||||||
seq2  T--CTATGT-AATCAT-ATTTCTGCATCA-GCTAGTCCT-GCCATCTATT  1093

seq1  A  1098
      |
seq2  A  1094