BAC Information

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BAC

Clone NameB6Ng01-282F19
Chromosome14 (Build37)
Map Location 85,379,154 - 85,380,175
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282F19.bB6Ng01-282F19.g
ACCGA081602GA081603
length1,1841,032
definitionB6Ng01-282F19.b B6Ng01-282F19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaattgatccattcttatctccttgtacaaagctcaggtccaag
tggatcaaggacctccacataaaaccagatacactgaaacttatagagga
aagtaaagaagagccttgagcatattggcaaaggggaaattttttctaat
cagaacaccaatggcttgtgctgtaaagtcaagtatcaacaaaagggacg
tcataaaattgcaaagcttctataaggcaaaggacactgtcaataagaca
aaatgcaacccgcaaccgacagattgggaaaagatctttaccaaccctac
atgcaatagaggactaatatccaaagaactcaagaaggtagactagatag
aaactaataaccctattaaaaatattgtacagagctaaacaaagatttct
caactgaggaataccgaatgtctgagaagcacctaaaaaatgttccacat
ccttagtcatcaggaaaatgcaaaccaaaacaaccctgagattccacctc
acactaatcagaatggctaagatcaaaaactcaggtgacaacagttgctt
acaaggatgtggagagagaggaacactcctctattgctcgagggatttca
aagtgttacaactactcaggaaatcactctggtgtttcctcagaaaattg
gacatagtacctgaggacccagatatgccactcctgggcatataccaaga
agatgctccaacatgtaataaggacactatgttcatagcagccttattta
taatagccagaagctggaaagaacccagatgtccctcaaaagaggaatgg
atacagaaaatgtggtacatttttcacaatggagtactactcagccatta
aaaacaacgaatttatgaaattcttggtcaaatggatgtatctggaggat
atcattctgagtgaggtaaaccaatcacaagtcacttgatatgtactcag
tgataagtggatattagcccagaaccctagaataccttaagataaatttc
acacaccacaaaacacatgaacttcagagaaagaagaccaagtgtgaata
ctttgattctctttagagatggaataaaactgcattgaggagtttgcaga
gagaaacctgttgaataagagaaccgagattgaccatgcagaacctggaa
tcactggggaccatgcgctaatatatcttcacca
gaattcttagagattatcagtttcctttagtgattgttgttttgttcatt
tcataaaatatgagagtaatgataattctgatcgctgaaaaaaataaaga
aataattggaaggattaatgaacaggtttgctttacatgggaaataattt
gtctcttttatgtagaaatgttcacgtgcattacataattcagcatgggc
atagaaggtaccaattatcatacattagaattaaaacatttgaactaaaa
gatagagattaaaacaaagcaaagaatgcagtattttatggaagaaagaa
tttgcctggttctcaaatatagaatttttttcagttccacaaataaacca
cacaatttataaataatgaaggtttgttaaagaaaaaagaaaagaaaaca
gacaataaacctaatattacattgctttaaaaattattgctgattgtgtt
tgtgtccaggtgttatctacatacatctctacattcatactcagtggtat
atttgtaactaaaacctcaaaatgatattgctgcatctcatttataaatt
ataaatttagtatcactttaagataaataaggagaattctacaatgtctc
atttgtgtaacctttcaaagcattcagaaatgaggatttaatatttgccc
aaacattgtttacttctgatatatgagctttgtcagaaacaaggtaataa
aattcctagaggaactctcttctaagaattgaataaaaccaaaaggatta
ttgaaataattttaccatctaatgatagagcttgtttaacttttttggat
tcattttataccaccgttccagactatttttttctttcttttttttaatt
gattaatttatttttttttacactccagattttagtcccactctgcactc
cccatccaccctctgactgttccacatctcaatattctcctccccacccc
ctgtctccaaattggatgtccctacaaccctaccccaccttgacccctaa
actccctccaattagggccctttagccctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85379154_85380175
seq2: B6Ng01-282F19.g_69_1100 (reverse)

seq1  AACA-GGCTAAAGG--CCTATTTGGAGGGAGTTTAGGGGTC-AGGTGGGG  46
      |||| |||||||||  |||| |||||||||||||||||||| ||||||||
seq2  AACAGGGCTAAAGGGCCCTAATTGGAGGGAGTTTAGGGGTCAAGGTGGGG  50

seq1  TAGGG-TGTAGGGACATCC-ATTTGGAGACAGGGGGTGGGGAGGAG-ATA  93
      ||||| ||||||||||||| |||||||||||||||||||||||||| |||
seq2  TAGGGTTGTAGGGACATCCAATTTGGAGACAGGGGGTGGGGAGGAGAATA  100

seq1  -TGAGATGTGGAACAGTCAGAGGGTGGATGGGGAGTGCAGAGTGGGACTA  142
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATGTGGAACAGTCAGAGGGTGGATGGGGAGTGCAGAGTGGGACTA  150

seq1  AAATCTGGAGTGTAAAAAAAAATAAATTAATCAATT-AAAAAAAGAAAG-  190
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  AAATCTGGAGTGTAAAAAAAAATAAATTAATCAATTAAAAAAAAGAAAGA  200

seq1  AAAAAATAGTCTGGAACGGTGGTATAAAATGAATCCAAAAAAGTTAAACA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGTCTGGAACGGTGGTATAAAATGAATCCAAAAAAGTTAAACA  250

seq1  AGCTCTATCATTAGATGGTAAAATTATTTCAATAATCCTTTTGGTTTTAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTATCATTAGATGGTAAAATTATTTCAATAATCCTTTTGGTTTTAT  300

seq1  TCAATTCTTAGAAGAGAGTTCCTCTAGGAATTTTATTACCTTGTTTCTGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTTAGAAGAGAGTTCCTCTAGGAATTTTATTACCTTGTTTCTGA  350

seq1  CAAAGCTCATATATCAGAAGTAAACAATGTTTGGGCAAATATTAAATCCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTCATATATCAGAAGTAAACAATGTTTGGGCAAATATTAAATCCT  400

seq1  CATTTCTGAATGCTTTGAAAGGTTACACAAATGAGACATTGTAGAATTCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGAATGCTTTGAAAGGTTACACAAATGAGACATTGTAGAATTCT  450

seq1  CCTTATTTATCTTAAAGTGATACTAAATTTATAATTTATAAATGAGATGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTATCTTAAAGTGATACTAAATTTATAATTTATAAATGAGATGC  500

seq1  AGCAATATCATTTTGAGGTTTTAGTTACAAATATACCACTGAGTATGAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATCATTTTGAGGTTTTAGTTACAAATATACCACTGAGTATGAAT  550

seq1  GTAGAGATGTATGTAGATAACACCTGGACACAAACACAATCAGCAATAAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATGTATGTAGATAACACCTGGACACAAACACAATCAGCAATAAT  600

seq1  TTTTAAAGCAATGTAATATTAGGTTTATTGTCTGTTTTCTTTTCTTTTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCAATGTAATATTAGGTTTATTGTCTGTTTTCTTTTCTTTTTT  650

seq1  CTTTAACAAACCTTCATTATTTATAAATTGTGTGGTTTATTTGTGGAACT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACAAACCTTCATTATTTATAAATTGTGTGGTTTATTTGTGGAACT  700

seq1  GAAAAAAATTCTATATTTGAGAACCAGGCAAATTCTTTCTTCCATAAAAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTCTATATTTGAGAACCAGGCAAATTCTTTCTTCCATAAAAT  750

seq1  ACTGCATTCTTTGCTTTGTTTTAATCTCTATCTTTTAGTTCAAATGTTTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTCTTTGCTTTGTTTTAATCTCTATCTTTTAGTTCAAATGTTTT  800

seq1  AATTCTAATGTATGATAATTGGTACCTTCTATGCCCATGCTGAATTATGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAATGTATGATAATTGGTACCTTCTATGCCCATGCTGAATTATGT  850

seq1  AATGCACGTGAACATTTCTACATAAAAGAGACAAATTATTTCCCATGTAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACGTGAACATTTCTACATAAAAGAGACAAATTATTTCCCATGTAA  900

seq1  AGCAAACCTGTTCATTAATCCTTCCAATTATTTCTTTATTTTTTTCAGCG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACCTGTTCATTAATCCTTCCAATTATTTCTTTATTTTTTTCAGCG  950

seq1  ATCAGAATTATCATTACTCTCATATTTTATGAAATGAACAAAACAACAAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATTATCATTACTCTCATATTTTATGAAATGAACAAAACAACAAT  1000

seq1  CACTAAAGGAAACTGATAATCTCTAAGAATTC  1022
      ||||||||||||||||||||||||||||||||
seq2  CACTAAAGGAAACTGATAATCTCTAAGAATTC  1032