BAC Information

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BAC

Clone NameB6Ng01-282J18
Chromosome14 (Build37)
Map Location 107,445,229 - 107,446,346
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneLOC668752, EG668754
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282J18.bB6Ng01-282J18.g
ACCGA081782GA081783
length1,1461,125
definitionB6Ng01-282J18.b B6Ng01-282J18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctcagaggaatgtctattggccagggagcacttaaagaactg
ttcagcatcattacccatcaaggaatacaaatcagaatgactttgagatt
tcatcttacatctgtcagaacggctaagatcaaaaactctagtgacactc
attcagaagtggatgtcgaacaagggaaaaacttctgattgctgatgaga
gtgcagatatatacaaccactttggaaatcaatctggcagtttcttagaa
aattgggaatagatccacctcgatatccagttcataagccatatacccaa
aggaggttctaccacactacaaggactcttcctcagcttggctcatagca
gctttgttcacaatcgtcagaaaatagaaacaacctagatgtccctcaac
ctaagactggataaaggaaatgtggtatatttacacagtagtatattact
tggctattagaaaaatgacatgaattttccagtcaagtgggtagacctag
aaaagatcttcttgagtgagataaatcagaacagaaagacaaatatggtg
tgtactcacttataagaggatatttgccataaaaagaagtatagccatgc
tgtaatccattgaccctcaggaaactaagtaacaagtaaggctcagggaa
ggccatgtgaatctcttggaaaagaggtaaaacaacagatattatggttg
tatttgaatggtggagtatactgcactggtactagagtaggaatgggaat
aggagggatcaggctgtgggaggatggagctagagagtgctgggagagac
aattagagtggtttagggaatctctggggtgagcttcccaggaatcgatg
agggtaaccctaagtaagactcctacttacttggaagatatggagcatga
accagccaatctcatgggcaagacttacatggatgggattgtgacacaaa
ctttgcaacaaaacctttcaatctacaatctgtcgtgcctacaagatgtg
caaggagttaatgatggaacataaatgcgagggaatagccaaccgataac
tgactcagatcgaaatccatgtgatgaagagggagccggtaatttgaaga
ttggttaatggaaatctaatgtctgatgctttaaggacgatgcgag
gaattcttgactatgagccaatattcagtgctttatgatgcagtatgaaa
gtttggatgaagcaagtctccctgatgcctgaaattaggagataacacat
ttgttgaatatttggccttctggcatagaggagatgttgatacagagtaa
atgaatgaaaataaaaacaaaccttcctcagtggattttttcaatcattg
ttttacctacttttgataattataacaaatacaagggaattttctgttaa
cagctgtgcatgttttctgtctccattgagaatgaggaggataaaaactt
tttgaatgctctcataggcaaactatgacctcagcttgagacagcttatg
atcaaaacagtctcttgtatgttgctgtttacatatgacctattttcacg
cttttcactaagactgtgtatatgcaatggttcgacatctatataaaaga
gtctgtttgctccagagtaaagctaattacctaataataatttctaaatt
actaagacactgaaagtaatgaagcttcttggaaattatttgtaatcagg
aaatcatcaccaggaacaccagaagactgacctcctaatgtcaatgttat
tgtaaaatcaaaaatgtattgctccatctgataaaataatgcgtttaaag
tgaaataacttcttctagagcttcacattatttgtagtaatttttaactt
ttaatacatgatactaccttaaaaatatttaattaccatacttaaaatgt
agttgtccttcaaaaagtaccttgcacatttacaagcctgtatggtagat
aatagcagtacaaagacttttgaaatacaaaataaattagaaatttgtgt
gtgtgtggtttatcgaaaatttctaaaatattttataagctacaagaagt
tatttcttgggtatgcccaagatcaatacacttgatatatataagaataa
tttccaattaatgagatatatgtttcaatatatgcgttcattttatttca
gttttaatatggaaatttaagtaaataaattatgttcaattttagtggac
ttccggaacggcagcactgtagattgttaacagttgttcctctgctaaga
aatgcctgaatgtctgaataatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107445229_107446346
seq2: B6Ng01-282J18.g_67_1191 (reverse)

seq1  TAGATTAATCAGACATTTCAGCATT--CTAGCAGAGG-ACAACTGTTAAC  47
      ||||||| |||||||||   |||||   ||||||||| ||||||||||||
seq2  TAGATTATTCAGACATTCAGGCATTTCTTAGCAGAGGAACAACTGTTAAC  50

seq1  -ATCTACAGTGCTGCCGTT-CGGGAGTCACTTAAAATTG-ACATAATTTA  94
       |||||||||||||||||| ||| ||||   |||||||| ||||||||||
seq2  AATCTACAGTGCTGCCGTTCCGGAAGTCCACTAAAATTGAACATAATTTA  100

seq1  TTTAC-TAAAATTCCATATTAAAAACTGAAAATAAATGAACGCATATATT  143
      ||||| |||| ||||||||| ||||||||||  |||||||||||||||||
seq2  TTTACTTAAATTTCCATATT-AAAACTGAAATAAAATGAACGCATATATT  149

seq1  GAAACATATATTCTCATTAATTGGAAATTATTCTTATATTATATCAAGTG  193
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  GAAACATATA-TCTCATTAATTGGAAATTATTCTTATA-TATATCAAGTG  197

seq1  TATTGATCTTGGGCATA-CCAAGAA--TACTTCTTGTAGCTTATAAAATA  240
      ||||||||||||||||| |||||||   ||||||||||||||||||||||
seq2  TATTGATCTTGGGCATACCCAAGAAATAACTTCTTGTAGCTTATAAAATA  247

seq1  TTTTAGAAATTTTCGATAAACCACACACACACAAATTTCTAATTTATTTT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAATTTTCGATAAACCACACACACACAAATTTCTAATTTATTTT  297

seq1  GTATTTCAAAAGTCTTTGTACTGCTATTATCTACCATACAGGCTTGTAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCAAAAGTCTTTGTACTGCTATTATCTACCATACAGGCTTGTAAA  347

seq1  TGTGCAAGGTACTTTTTGAAGGACAACTACATTTTAAGTATGGTAATTAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAGGTACTTTTTGAAGGACAACTACATTTTAAGTATGGTAATTAA  397

seq1  ATATTTTTAAGGTAGTATCATGTATTAAAAGTTAAAAATTACTACAAATA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAGGTAGTATCATGTATTAAAAGTTAAAAATTACTACAAATA  447

seq1  ATGTGAAGCTCTAGAAGAAGTTATTTCACTTTAAACGCATTATTTTATCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGCTCTAGAAGAAGTTATTTCACTTTAAACGCATTATTTTATCA  497

seq1  GATGGAGCAATACATTTTTGATTTTACAATAACATTGACATTAGGAGGTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGCAATACATTTTTGATTTTACAATAACATTGACATTAGGAGGTC  547

seq1  AGTCTTCTGGTGTTCCTGGTGATGATTTCCTGATTACAAATAATTTCCAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTGGTGTTCCTGGTGATGATTTCCTGATTACAAATAATTTCCAA  597

seq1  GAAGCTTCATTACTTTCAGTGTCTTAGTAATTTAGAAATTATTATTAGGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTCATTACTTTCAGTGTCTTAGTAATTTAGAAATTATTATTAGGT  647

seq1  AATTAGCTTTACTCTGGAGCAAACAGACTCTTTTATATAGATGTCGAACC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCTTTACTCTGGAGCAAACAGACTCTTTTATATAGATGTCGAACC  697

seq1  ATTGCATATACACAGTCTTAGTGAAAAGCGTGAAAATAGGTCATATGTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATATACACAGTCTTAGTGAAAAGCGTGAAAATAGGTCATATGTAA  747

seq1  ACAGCAACATACAAGAGACTGTTTTGATCATAAGCTGTCTCAAGCTGAGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACATACAAGAGACTGTTTTGATCATAAGCTGTCTCAAGCTGAGG  797

seq1  TCATAGTTTGCCTATGAGAGCATTCAAAAAGTTTTTATCCTCCTCATTCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTTGCCTATGAGAGCATTCAAAAAGTTTTTATCCTCCTCATTCT  847

seq1  CAATGGAGACAGAAAACATGCACAGCTGTTAACAGAAAATTCCCTTGTAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGACAGAAAACATGCACAGCTGTTAACAGAAAATTCCCTTGTAT  897

seq1  TTGTTATAATTATCAAAAGTAGGTAAAACAATGATTGAAAAAATCCACTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATAATTATCAAAAGTAGGTAAAACAATGATTGAAAAAATCCACTG  947

seq1  AGGAAGGTTTGTTTTTATTTTCATTCATTTACTCTGTATCAACATCTCCT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTTTGTTTTTATTTTCATTCATTTACTCTGTATCAACATCTCCT  997

seq1  CTATGCCAGAAGGCCAAATATTCAACAAATGTGTTATCTCCTAATTTCAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCAGAAGGCCAAATATTCAACAAATGTGTTATCTCCTAATTTCAG  1047

seq1  GCATCAGGGAGACTTGCTTCATCCAAACTTTCATACTGCATCATAAAGCA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGGGAGACTTGCTTCATCCAAACTTTCATACTGCATCATAAAGCA  1097

seq1  CTGAATATTGGCTCATAGTCAAGAATTC  1118
      ||||||||||||||||||||||||||||
seq2  CTGAATATTGGCTCATAGTCAAGAATTC  1125