BAC Information

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BAC

Clone NameB6Ng01-282N03
Chromosome14 (Build37)
Map Location 41,090,066 - 41,091,140
singlet/doubletsinglet
Overlap genenone
Upstream geneNrg3, LOC100040439
Downstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282N03.bB6Ng01-282N03.g
ACCGA081935GA081936
length1,0831,158
definitionB6Ng01-282N03.b B6Ng01-282N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgctagaatgaaccattacattcggatcaaacactcccttgcc
gtttcattccataccttcagatcccttagcattccttgtacaaatcattt
ccaaaggcccatgaaccacatcgtcagacacagtagtaccttacttctca
gaataaattctctgcattagttatttttataccgctgtgctaaatttact
gacagaaggagcataaaggaagaagtatttattttagtctcaggcatgca
cgaacactgcaattcctgtatattgttatattgttattgttattattatt
attattattaattgttttattcattttacatgtatgtgtgtttatatgta
tgagtgcctgcatgtatctgtgtaccacatgcatgcctgatgtcctcggt
ggctagaagaagttatcagatcctcagaactggaatacagatgtctgtga
actgcaatgtggatgctaggaatcaaactcacgtctcttgaaagagcaat
taatgtcctctacccttgactactgaaccatctctccagtacctcatcca
gaaaccctgacaccctctactggcctctgtggacaccaaggttcatctct
tgacatcagttaaagctcactggagattatctcatgctcagaggtgtctt
cctcaaatgattttgaattcaggtcaagttgacagtaccacaatgtgcaa
ctattacatgactattatatgtacctttggagaacaatattttttagacc
atttttcaagttttataagtatcttcatcttaaaattatccttatatcaa
agtgagttgagtttactttcagattcacatatgtgttttttccctgttat
ttaattatttagaattttctttgttgattaaaatacatatttcaaggaca
cacgtcttttaggctattgggaaactaattgtggtttattttgagactcc
gaatatgggaagactatttttatccttctgattcctaataacatattaat
ggagctggcgtttttaggcacatttaagaatttgaaaggaaattctcaca
aataaagtttcacatttaaggatactatttttg
gaattcttaacatttatgtcccaaattcaagggtacccacatttgtaaga
gaaacataactagagcttaaatcacattgacccttacacactgataatga
gacttcaatacaccactctaaccaaaagacaggttatccagacaaaaact
aagcagagaaatattgcagatgagtgatgttatgaactaaagggatctaa
cagatatttacagaacattgcaaccaaacacaaaagaatatattttcttc
tcagcatctcttagaactttctcccaaaatggcttcatatttgaatacac
agcaagtctccaatatcaacaatagaaacatcagaaagcttacaaacttc
aggaaactgaacagcaggctagtgaacaaaaaatgcatcaagacagaaat
taagaaagaaattaaagaattcttagaattgtatgaaagtgaatacacaa
cacaacaaatgtgtagagcacaataaatgtgattttaagatgcaaattca
tagtactaagtgcctacatagaaaaaaactggagagatctcatactagta
acatacaacacacatgtcaaatttaaacaacaaagaggaaatcatacaca
aatagatcagatggaaaaaaataaccaaactcagagtaaaataaataaga
cagagacaaacaaaaaagtcaatgaaacagagggtcagttctctgagtaa
acaaatacaattctttattcaaattaactaaaaagctaatagagaatatc
aaaattaataaaatcaaaagtgaaacataataaaatcgaaagagggtcat
aataacagataccaggaaattcagagcataataaggacatgttctaaacc
cctttactccaaaacattgaaaaaatctaaaagaaatagataatttttca
ttacctgttaaatcaagatcagataagcaattaaaacacaattataactc
ctggtgaaatacaagcagttataaaaacttaccccccaaaaattacccca
tagccatattgtcatagcagaattctatcagacttccaagaagtgttatg
cacttactctccaataatcacatgttctgaaaacaatgaacaattgtcct
aatgttgcagacaacttactctgaaccctaaagcactagagaccaagcaa
ggctaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41090066_41091140
seq2: B6Ng01-282N03.b_49_1131 (reverse)

seq1  CAAAAATATGTTATCTTTAAATGTGAAA-TTTATTGTTGAGA--TTTCTT  47
      ||||||||   |||| |||||||||||| ||||||  |||||  || |||
seq2  CAAAAATA--GTATCCTTAAATGTGAAACTTTATTTGTGAGAATTTCCTT  48

seq1  TCAAATTCTT-AATGTGCTTAAAAACG-CAGCT-CATTAATATGTTATTA  94
      |||||||||| ||||||| |||||||| ||||| ||||||||||||||||
seq2  TCAAATTCTTAAATGTGCCTAAAAACGCCAGCTCCATTAATATGTTATTA  98

seq1  GGAATCAGAGGGATAAAAATAGTCTT-CCATATTCGGAGTCTCAAAATAA  143
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  GGAATCAGAAGGATAAAAATAGTCTTCCCATATTCGGAGTCTCAAAATAA  148

seq1  ACCACAATTAGTTTCCCAATAGCCTAAAAGACGTGTGTCCTTG-AATATG  192
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCACAATTAGTTTCCCAATAGCCTAAAAGACGTGTGTCCTTGAAATATG  198

seq1  TATTTTAATCAACAAAGAAAATTCTAAATAATTAAATAACAGGGAAAAAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATCAACAAAGAAAATTCTAAATAATTAAATAACAGGGAAAAAA  248

seq1  CACATATGTGAATCTG-AAGTAAACTCAACTCACTTTGATATAAGGATAA  291
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CACATATGTGAATCTGAAAGTAAACTCAACTCACTTTGATATAAGGATAA  298

seq1  TTTTAAGATGAAGATACTTATAAAACTTG-AAAATGGTCTAAAAAATATT  340
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTAAGATGAAGATACTTATAAAACTTGAAAAATGGTCTAAAAAATATT  348

seq1  GTTCTCCAAAGGTACATATAATAGTCATGTAATAGTTGCACATTGTGGTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAAAGGTACATATAATAGTCATGTAATAGTTGCACATTGTGGTA  398

seq1  CTGTCAACTTGACCTGAATTCAAAATCATTTGAGGAAGACACCTCTGAGC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAACTTGACCTGAATTCAAAATCATTTGAGGAAGACACCTCTGAGC  448

seq1  ATGAGATAATCTCCAGTGAGCTTTAACTGATGTCAAGAGATGAACCTTGG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATAATCTCCAGTGAGCTTTAACTGATGTCAAGAGATGAACCTTGG  498

seq1  TGTCCACAGAGGCCAGTAGAGGGTGTCAGGGTTTCTGGATGAGGTACTGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACAGAGGCCAGTAGAGGGTGTCAGGGTTTCTGGATGAGGTACTGG  548

seq1  AGAGATGGTTCAGTAGTCAAGGGTAGAGGACATTAATTGCTCTTTCAAGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGTTCAGTAGTCAAGGGTAGAGGACATTAATTGCTCTTTCAAGA  598

seq1  GACGTGAGTTTGATTCCTAGCATCCACATTGCAGTTCACAGACATCTGTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGAGTTTGATTCCTAGCATCCACATTGCAGTTCACAGACATCTGTA  648

seq1  TTCCAGTTCTGAGGATCTGATAACTTCTTCTAGCCACCGAGGACATCAGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCTGAGGATCTGATAACTTCTTCTAGCCACCGAGGACATCAGG  698

seq1  CATGCATGTGGTACACAGATACATGCAGGCACTCATACATATAAACACAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGTGGTACACAGATACATGCAGGCACTCATACATATAAACACAC  748

seq1  ATACATGTAAAATGAATAAAACAATTAATAATAATAATAATAATAACAAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTAAAATGAATAAAACAATTAATAATAATAATAATAATAACAAT  798

seq1  AACAATATAACAATATACAGGAATTGCAGTGTTCGTGCATGCCTGAGACT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATAACAATATACAGGAATTGCAGTGTTCGTGCATGCCTGAGACT  848

seq1  AAAATAAATACTTCTTCCTTTATGCTCCTTCTGTCAGTAAATTTAGCACA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATACTTCTTCCTTTATGCTCCTTCTGTCAGTAAATTTAGCACA  898

seq1  GCGGTATAAAAATAACTAATGCAGAGAATTTATTCTGAGAAGTAAGGTAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTATAAAAATAACTAATGCAGAGAATTTATTCTGAGAAGTAAGGTAC  948

seq1  TACTGTGTCTGACGATGTGGTTCATGGGCCTTTGGAAATGATTTGTACAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTCTGACGATGTGGTTCATGGGCCTTTGGAAATGATTTGTACAA  998

seq1  GGAATGCTAAGGGATCTGAAGGTATGGAATGAAACGGCAAGGGAGTGTTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCTAAGGGATCTGAAGGTATGGAATGAAACGGCAAGGGAGTGTTT  1048

seq1  GATCCGAATGTAATGGTTCATTCTAGCAGGAATTC  1075
      |||||||||||||||||||||||||||||||||||
seq2  GATCCGAATGTAATGGTTCATTCTAGCAGGAATTC  1083