BAC Information

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BAC

Clone NameB6Ng01-282N06
Chromosome14 (Build37)
Map Location 51,705,559 - 51,706,362
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441
Downstream geneRnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282N06.bB6Ng01-282N06.g
ACCGA081941GA081942
length1,169804
definitionB6Ng01-282N06.b B6Ng01-282N06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagatctgcctgcctctgacaagcagagatagtaaactagctg
ggtgggacctgaaatttctagtcctaaaattaccatttctaccccaactg
ggcttagactggttgtgacccaggctgacattgaactcaggaatgtgcct
gcctttgtgtcttcctgacaacctagtttatagtacagctgcctttgttc
tttcacattcatgaagcccctcatataattcgtattgcatcctttttttt
caattttttattagatattttcttcatttacatttcaaatgctatcccaa
aagtcccgtatacactcccctcgccctacccacccattcccacttcttgg
ccttgacgttcccctgtatggggcatataaagtttgcaagaccaaggggc
ctatcttcccaatgatggctgactaggccatcttctgctacatatgcagc
tagaaacatgagctctgggggtactggttagttcatattgttgttccacc
tatagaattgcagaccccttcaactccttaggtaatttctctagctcctc
cattgggggctctgtgttccatccaataaatgactatgagcatccacttc
tgtatttgccaggcactggcatagcctcaccagagagagctatatcagtg
tctggctggagcgtgttcctcctgtgattctttagcctctgtcaacactc
ctgagagtccaactctctcctgagtctcagtggtcagagcactctctgca
ggcaagctctcctcttgcagcaaaggtgcacagaagtgtggacctcagat
ccacctcctgagtcctaagatcatattcttccctggaggccgactctcct
ctggtggggaaggtgcccaggagtttgggtctcagctctgcctcctggct
gagatgaacgcccgaaagggaccctgtacaagaagctgtgtgcttctgct
gcccatgtgctctcctgtgtagactgacctcagtgatcccaagatctagg
gttgtgctaggcctgccaagttcatgcccgagatgtcgaggggctgtgct
gacaagatcgaacctcagcactgatcgactgatccttagtccttgttctg
ccagtacatacccttcaggaatttttggacaatgtggttcagtcacagtg
atctacatctggcgtggcc
gaattcactttgtagaccatgttgtcctcgaactcagaaatccacctgct
tctgcctcccaagtgctgggattaaaggcatgcaccaccgcacccggctg
caaacatgtacacccaccaagggcaactcttataagaacatttaactggg
gctggcttacaggtcagaggttcagtacattatcatcaaggtgggagcag
ggaggcatggtgtaggaggagctgagagatctacatctgagtgctgctag
aaaaataatgacttccaggcagctaggacaaggatcttaaaacccatgcc
cacagtgacaggcctactccagcaaggccacacctactccaacagggcta
caccttcttatagtgccactccctgggctgagcacatacaaaccaccaca
ctgcacctcctgtttctcccgcccagaccctgacactgctgcacctctgt
cttttccagatatactggaaatgaagatttcttcccctccttttcttgga
tattttctttatttatatttcaaatgttatcccctttcctgtttcccctc
tgcaaaccctccatatcccctccccacctccccctgcttctatgagggtg
ctccccctcccacctactcctacctccctgccctggcattcccctacacc
agggcatcgagccttcataggaccaagggcctctcctcccatggatgccc
gacaaggccattctctgctatatatttggttggagccatgggtccctcca
tgtgcactctttggttggtggtttagttcctgggcactcgtggggggggg
gggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51705559_51706362
seq2: B6Ng01-282N06.g_67_870

seq1  GAATTCACTTTGTAGACCATGTTGTCCTCGAACTCAGAAATCCACCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCATGTTGTCCTCGAACTCAGAAATCCACCTGCT  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCGCACCCGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCGCACCCGGCTG  100

seq1  CAAACATGTACACCCACCAAGGGCAACTCTTATAAGAACATTTAACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATGTACACCCACCAAGGGCAACTCTTATAAGAACATTTAACTGGG  150

seq1  GCTGGCTTACAGGTCAGAGGTTCAGTACATTATCATCAAGGTGGGAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTACAGGTCAGAGGTTCAGTACATTATCATCAAGGTGGGAGCAG  200

seq1  GGAGGCATGGTGTAGGAGGAGCTGAGAGATCTACATCTGAGTGCTGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCATGGTGTAGGAGGAGCTGAGAGATCTACATCTGAGTGCTGCTAG  250

seq1  AAAAATAATGACTTCCAGGCAGCTAGGACAAGGATCTTAAAACCCATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGACTTCCAGGCAGCTAGGACAAGGATCTTAAAACCCATGCC  300

seq1  CACAGTGACAGGCCTACTCCAGCAAGGCCACACCTACTCCAACAGGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGACAGGCCTACTCCAGCAAGGCCACACCTACTCCAACAGGGCTA  350

seq1  CACCTTCTTATAGTGCCACTCCCTGGGCTGAGCACATACAAACCACCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTTATAGTGCCACTCCCTGGGCTGAGCACATACAAACCACCACA  400

seq1  CTGCACCTCCTGTTTCTCCCGCCCAGACCCTGACACTGCTGCACCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCTCCTGTTTCTCCCGCCCAGACCCTGACACTGCTGCACCTCTGT  450

seq1  CTTTTCCAGATATACTGGAAATGAAGATTTCTTCCCCTCCTTTTCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAGATATACTGGAAATGAAGATTTCTTCCCCTCCTTTTCTTGGA  500

seq1  TATTTTCTTTATTTATATTTCAAATGTTATCCCCTTTCCTGTTTCCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTATTTATATTTCAAATGTTATCCCCTTTCCTGTTTCCCCTC  550

seq1  TGCAAACCCTCCATATCCCCTCCCCACCTCCCCCTGCTTCTATGAGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCCTCCATATCCCCTCCCCACCTCCCCCTGCTTCTATGAGGGTG  600

seq1  CTCCCCCTCCCACCTACTCCTACCTCCCTGCCCTGGCATTCCCCTACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCACCTACTCCTACCTCCCTGCCCTGGCATTCCCCTACACC  650

seq1  AGGGCATCGAGCCTTCATAGGACCAAGGGCCTCTCCTCCCATGGATGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCGAGCCTTCATAGGACCAAGGGCCTCTCCTCCCATGGATGCCC  700

seq1  GACAAGGCCATTCTCTGCTATATATTTGGTTGGAGCCATGGGTCCCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGCCATTCTCTGCTATATATTTGGTTGGAGCCATGGGTCCCTCCA  750

seq1  TGTGCACTCTTTGGTTGGTGGTTTAGTTCCTGGGCACTCGTGGGGGGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACTCTTTGGTTGGTGGTTTAGTTCCTGGGCACTCGTGGGGGGGGG  800

seq1  GGGG  804
      ||||
seq2  GGGG  804