MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-284J08
Chromosome	14 (Build37)
Map Location	36,117,886 - 36,119,013
singlet/doublet	singlet
Overlap gene	Grid1
Upstream gene	3110001K24Rik, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341
Downstream gene	4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	3110001K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75698 MGI:1922948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glud1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14661 MGI:95753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041231 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins

name	2200001I15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69134 MGI:1916384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sncg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20618 MGI:1298397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmrn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105450 MGI:2385618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bmpr1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12166 MGI:1338938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9230112D13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78243 MGI:1925493
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC665834 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins pseudo : _no_value

name	Ldb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 7 mRNAs

name	Opn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30044 MGI:1353425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5830448L01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76031 MGI:1923281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Wapal (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218914 MGI:2675859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs

name	Grid1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14803 MGI:95812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930596D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239036 MGI:3588288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC665933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein pseudo : _no_value

name	4930474N05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218921 MGI:3586330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110001K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122891875 GeneID:75698 MGI:1922948
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110001K24 gene transcript_id : NM_029389.2

name	Glud1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130959 GeneID:14661 MGI:95753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate dehydrogenase 1 transcript_id : NM_008133.3

name	LOC100041231 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265443 GeneID:100041231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins product : similar to Bcl7c protein transcript_id : XM_001476851.1

name	2200001I15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367260 GeneID:69134 MGI:1916384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2200001I15 gene transcript_id : NM_183278.2

name	Sncg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386371 GeneID:20618 MGI:1298397
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synuclein, gamma transcript_id : NM_011430.2

name	Mmrn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122937369 GeneID:105450 MGI:2385618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multimerin 2 transcript_id : NM_153127.3

name	Bmpr1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891829 GeneID:12166 MGI:1338938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein receptor, type 1A transcript_id : NM_009758.4

name	9230112D13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396907 GeneID:78243 MGI:1925493
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 9230112D13 gene transcript_id : XM_127665.5

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056486 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039072.2

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056487 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039073.2

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056484 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039071.2

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056485 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_011918.4

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056488 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039074.2

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056489 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039075.2

name	Ldb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122056490 GeneID:24131 MGI:1344412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 3 transcript_id : NM_001039076.2

name	Opn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14349304 GeneID:30044 MGI:1353425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opsin 4 (melanopsin) transcript_id : NM_013887.1

name	5830448L01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396909 GeneID:76031 MGI:1923281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 5830448L01 gene transcript_id : XM_979896.1

name	Wapal (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100815492 GeneID:218914 MGI:2675859
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wings apart-like homolog (Drosophila) transcript_id : NM_001004436.2

name	LOC100041341 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265450 GeneID:100041341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs product : hypothetical protein LOC100041341 transcript_id : XM_001476968.1

name	Grid1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680088 GeneID:14803 MGI:95812
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, delta 1 transcript_id : NM_008166.1

name	4930596D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802844 GeneID:239036 MGI:3588288
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930596D02 gene transcript_id : NM_001033766.2

name	4930474N05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801844 GeneID:218921 MGI:3586330
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930474N05 gene transcript_id : NM_175008.2

name	Glud1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680027 CCDS:CCDS26935.1 GeneID:14661 MGI:95753
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004353 - glutamate dehydrogenase [NAD(P)+] activity [Evidence IDA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006520 - amino acid metabolism [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 product : glutamate dehydrogenase 1 protein_id : NP_032159.1

name	LOC100041231 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265444 GeneID:100041231
definition	codon_start : 1 product : similar to Bcl7c protein protein_id : XP_001476901.1

name	2200001I15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304077 GeneID:69134 MGI:1916384
definition	codon_start : 1 product : hypothetical protein LOC69134 protein_id : NP_899101.1

name	Sncg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755592 CCDS:CCDS26937.1 GeneID:20618 MGI:1298397
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : gamma-synuclein product : synuclein, gamma protein_id : NP_035560.1

name	Mmrn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122937370 GeneID:105450 MGI:2385618
definition	codon_start : 1 product : elastin microfibril interfacer 3 protein_id : NP_694767.3

name	Bmpr1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46519168 CCDS:CCDS26938.1 GeneID:12166 MGI:1338938
definition	EC_number : 2.7.11.1 GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004702 - receptor signaling protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0005024 - transforming growth factor beta receptor activity [Evidence IEA]; GO:0004675 - transmembrane receptor protein serine/threonine kinase activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0051216 - cartilage development [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IGI]; GO:0009950 - dorsal/ventral axis specification [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0007398 - ectoderm development [Evidence IMP]; GO:0007492 - endoderm development [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0035137 - hindlimb morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0048382 - mesendoderm development [Evidence IMP]; GO:0001880 - Mullerian duct regression [Evidence IMP]; GO:0050679 - positive regulation of epithelial cell proliferation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IEA]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IEA] codon_start : 1 product : bone morphogenetic protein receptor, type 1A protein_id : NP_033888.2

name	9230112D13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396908 GeneID:78243 MGI:1925493
definition	codon_start : 1 product : hypothetical protein LOC78243 protein_id : XP_127665.4

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875544 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform c protein_id : NP_001034161.1

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872219 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform d is encoded by transcript variant 4; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform d protein_id : NP_001034162.1

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872215 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform e is encoded by transcript variant 5; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform e protein_id : NP_001034163.1

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872213 CCDS:CCDS26940.1 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform b protein_id : NP_001034160.1

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872211 CCDS:CCDS26941.1 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform a protein_id : NP_036048.3

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872217 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform f is encoded by transcript variant 6; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform f protein_id : NP_001034164.1

name	Ldb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872221 CCDS:CCDS26942.1 GeneID:24131 MGI:1344412
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] [Evidence IEA]; GO:0005080 - protein kinase C binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform g is encoded by transcript variant 7; cypher; PDZ-LIM domain protein; oracle protein; Z-band alternatively spliced PDZ-motif protein product : LIM domain binding 3 isoform g protein_id : NP_001034165.1

name	Opn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14349305 CCDS:CCDS26943.1 GeneID:30044 MGI:1353425
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007602 - phototransduction [Evidence IEA]; GO:0018298 - protein-chromophore linkage [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : melanopsin product : opsin 4 protein_id : NP_038915.1

name	5830448L01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396910 GeneID:76031 MGI:1923281
definition	codon_start : 1 product : hypothetical protein LOC76031 protein_id : XP_984990.1

name	Wapal (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:100815493 GeneID:218914 MGI:2675859
definition	codon_start : 1 note : friend of EBNA2; WAPL protein product : wings apart-like homolog protein_id : NP_001004436.2

name	LOC100041341 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265451 GeneID:100041341
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477018.1

name	Grid1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680089 CCDS:CCDS26944.1 GeneID:14803 MGI:95812
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor, ionotropic, delta 1 protein_id : NP_032192.1

name	4930596D02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702073 GeneID:239036 MGI:3588288
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC239036 protein_id : NP_001028938.1

name	4930474N05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239423 GeneID:218921 MGI:3586330
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC218921 protein_id : NP_778173.1

name	LOC100040277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040277
definition	number : 1 pseudo : _no_value

name	LOC665834 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265449 GeneID:665834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_032985.1

name	LOC665933 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265386 GeneID:665933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : hypothetical LOC665933 pseudo : _no_value transcript_id : XR_031751.1

clone name	MSMg01-198C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-382K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-317K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-284J08.b	B6Ng01-284J08.g
ACC	GA083248	GA083249
length	500	1,128
definition	B6Ng01-284J08.b	B6Ng01-284J08.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaatggggttatttgatt ttctgaagatataagatacaatttcctaaacacatgaaactcaagaaaaa tgaagactgaagtgtgaacactatgcccctccttagaagtgggagcaaaa cacccttggaaggagttacagagacaaagtttggagctgagataaaagga tggaccatgtagacactaccatatccggggatccatcccataatcagctt ccaaatgctgacaccattgcatacactagcaagattatgctgaaaggacc ctgatatagctgtctcttgtcagagtatgcctgggcctagcaagcataga agtggatgctcacagtcggctattggatggatcacatggcccccaatgaa ggagctagagaaagtaccaaagaagctaaagggatctgcaacactatagg tggaacaacattatgaactaaccagtaccccggagctcttgactctagct	gaattcaagaaaaaaacaaagtcctgaactagtggacctgaaaatagata tttgacagcagcaagcatgtagcaaaaccacatgaagtgttattcacagt ggccacaaagcaaaaccacgtgaaacagttatatacaatggccacaaagc aagcctctctctacccaagctcagaagggtttaaagcttaactgtagcaa acattccacaacttggagaagatatttgtagcatgtgacaaaggcttatt tagaataaatttaaaaataagagacccataaatcactatgcaacagactc acccagtggaaatttaacagtccacaaatataaggacagaaacataaatg catgaaagacactcaaccctattaagaattaagtgaaaacaaatcctaac agtattccaagcatactcacgagactggcacatcttaattagtcacatgt gaggtgttggcaagtgtgcaggactaacactcaacttattgcacgatcat aatttggtacaacttcattagaaatttggccctttctaataaatttgagc atgtttctattctcttatcaggataccacaatcttaggtatatgatgcct tagagaaattcttacacaagtacatgaagatacacaggaaattgttcata gatgccaacaagtgaagcatctattatcagcaatgggttaacaaatggta acccttttgtcatgtcatgttgtcatgcacacctacacctggccccatga acaaaccttggaactttaatgtttaacaggtttaatgtttaaggtttaac aggtttaatgtttcattttaaaagatttattttgacttttacatgtgttt tgccttcatgaatatatgaatatgatgagcatgcagtcctcttagagcca gacaagagcgttggaatcactggaaactagagttacagatagatataagt ctccacatgagttatggctctaaaccactgagccatctctccaccccatg agcaagtggttttatacattgctgactattggggtatttattcagagttg ttcatgagaaccaaggagtttgctctttggatcaatgtaatttatccagg cttcaatgactcctgatgtaaatagagt
quality values	Open. Hide. 47 22 29 32 58 58 58 58 62 62 62 62 31 14 41 62 62 62 47 62 62 62 62 62 62 62 47 62 62 62 30 26 22 25 19 25 32 28 32 40 45 28 34 35 45 56 62 59 59 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 49 56 56 50 56 56 59 59 62 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 54 54 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 43 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62	Open. Hide. 62 47 50 47 62 47 51 54 62 59 62 24 24 23 23 23 25 23 25 27 25 28 62 59 62 62 54 62 62 59 59 62 62 62 62 59 59 62 62 59 54 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 51 59 50 46 43 48 56 59 62 62 62 54 42 62 59 62 62 62 62 62 62 62 62 62 62 62 54 54 54 48 59 62 56 54 56 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 37 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 53 58 58 58 45 54 58 58 58 58 58 58 54 54 58 54 52 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 52 54 58 58 58 58 58 51 54 51 51 52 54 58 45 41 51 49 58 53 58 58 58 58 58 51 58 58 42 58 49 50 49 50 51 58 58 41 58 47 58 58 58 51 32 58 42 58 58 32 28 58 58 54 58 51 53 50 51 41 58 51 58 50 51 50 58 58 58 58 50 58 33 50 51 51 51 52 49 58 58 58 44 47 52 58 49 51 51 50 58 52 49 49 46 49 50 39 31 51 51 31 46 49 51 58 51 58 40 53 50 53 51 49 49 49 49 50 49 53 41 41 52 49 44 39 54 49 44 44 37 38 47 45 47 51 51 41 54 54 37 53 49 40 54 54 42 54 54 27 51 38 45 34 39 51 32 53 33 40 53 52 52 54 40 53 36 40 53 45 39 44 38 47 47 41 39 53 34 44 35 24 52 51 37 54 54 39 24 40 40 46 31 33 19 53 41 20 38 47 34 25 29 47 23 24 32 52 53 40 45 40 46 18 53 52 33 34 32 32 31 53 33 53 26 28 45 40 41 10 51 40 25 33 24 28 8 51 33 34 45 32 33 15 33 29 46 28 31 32 31 38 17 51 31 31 31 25 51 46 21 26 51 51 30 27 33 17 47 31 42 31 48 47 40 31 31 31 23 47 48 17 23 33 22 43 42 36 42 32 48 46 28 32 31 38 31 31 31 32 31 31 46 15 25 30 31 31 30 30 36 41 31 27 24 31 41 24 38 38 33 38 32 34 36 31 27 24 22 32 33 28 31 31 31 31 14 29 23 30 31 29 23 37 18 17 25 22 39 14 33 31 38 26 30 21 26 31 32 33 25 32 31 31 24 7 41 13 22 17 17 23 31 26 22 27 26 27 21 23 26 27 35 25 31 31 32 31 14 25 18 21 32 34 33 17 14 23 32 32 25 33 28 37 24 31 14 19 18 24 21 18 26 19 36 19 18 15 16 32 31 33 32 16 19 23 22 32 22 27 27 25 21 27 12 17 34 32 20 7 14 23 27 20 28 15 16 17 23 18 21 23 31 34 22 27 27 27 28 16 18 6 3 3 3 10 28 26 18 22 16 21 21 47 47 21 5 6 6 17 15 17 17 21 18 9 8 21 9 11 6 9 9 11 19 16 8 14 2 4 18 22 8 5 2 3 5 5 11 7 17 26 13 21 15 6 7 5 16 11 14 7 18 18 6 7 10 8 10 11 7 7 5 6 10 14 19 9 9 16 7 6 16 18 12 4 3 6 13 21 11 6 4 5 12 12 6 13 7 17 1 4 5 5 6 7 4 5 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_36117886_36119013
seq2: B6Ng01-284J08.g_65_1192

seq1  GAATTCAAGAAAAAAACAAAGTCCTGAACTAGTGGACCTGAAAATAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAAAAACAAAGTCCTGAACTAGTGGACCTGAAAATAGATA  50

seq1  TTTGACAGCAGCAAGCATGTAGCAAAACCACATGAAGTGTTATTCACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAGCAGCAAGCATGTAGCAAAACCACATGAAGTGTTATTCACAGT  100

seq1  GGCCACAAAGCAAAACCACGTGAAACAGTTATATACAATGGCCACAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAAAGCAAAACCACGTGAAACAGTTATATACAATGGCCACAAAGC  150

seq1  AAGCCTCTCTCTACCCAAGCTCAGAAGGGTTTAAAGCTTAACTGTAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCTCTCTACCCAAGCTCAGAAGGGTTTAAAGCTTAACTGTAGCAA  200

seq1  ACATTCCACAACTTGGAGAAGATATTTGTAGCATGTGACAAAGGCTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCACAACTTGGAGAAGATATTTGTAGCATGTGACAAAGGCTTATT  250

seq1  TAGAATAAATTTAAAAATAAGAGACCCATAAATCACTATGCAACAGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAAATTTAAAAATAAGAGACCCATAAATCACTATGCAACAGACTC  300

seq1  ACCCAGTGGAAATTTAACAGTCCACAAATATAAGGACAGAAACATAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTGGAAATTTAACAGTCCACAAATATAAGGACAGAAACATAAATG  350

seq1  CATGAAAGACACTCAACCCTATTAAGAATTAAGTGAAAACAAATCCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGACACTCAACCCTATTAAGAATTAAGTGAAAACAAATCCTAAC  400

seq1  AGTATTCCAAGCATACTCACGAGACTGGCACATCTTAATTAGTCACATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCAAGCATACTCACGAGACTGGCACATCTTAATTAGTCACATGT  450

seq1  GAGGTGTTGGCAAGTGTGCAGGACTAACACTCAACTTATTGCACGATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTTGGCAAGTGTGCAGGACTAACACTCAACTTATTGCACGATCAT  500

seq1  AATTTGGTACAACTTCATTAGAAATTTGGCCCTTTCTAATAAATTTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTACAACTTCATTAGAAATTTGGCCCTTTCTAATAAATTTGAGC  550

seq1  ATGTTTCTATTCTCTTATCAGGATACCACAATCTTAGGTATATGATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTATTCTCTTATCAGGATACCACAATCTTAGGTATATGATGCCT  600

seq1  TAGAGAAATTCTTACACAAGTACATGAAGATACACAGGAAATTGTTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAATTCTTACACAAGTACATGAAGATACACAGGAAATTGTTCATA  650

seq1  GATGCCAACAAGTGAAGCATCTATTATCAGCAATGGGTTAACAAATGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAACAAGTGAAGCATCTATTATCAGCAATGGGTTAACAAATGGTA  700

seq1  ACCCTTTTGTCATGTCATGTTGTCATGCACACCTACACCTGGCCCCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTGTCATGTCATGTTGTCATGCACACCTACACCTGGCCCCATGA  750

seq1  ACAAACCTTGGAACTTTAATGTTTAACAGGTTTAATGTTTAAGGTTTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCTTGGAACTTTAATGTTTAACAGGTTTAATGTTTAAGGTTTAAC  800

seq1  AGGTTTAATGTTTCATTTTAAAAGATTTATTTTGAC-TTTACATGTGTTT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGTTTAATGTTTCATTTTAAAAGATTTATTTTGACTTTTACATGTGTTT  850

seq1  TGCCTTCATGAATATATGAATATGATGAGCATGCAGTCCTCTTAGAGCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCATGAATATATGAATATGATGAGCATGCAGTCCTCTTAGAGCCA  900

seq1  GACAAGAGCGTTGGAATCACTGG-AACTAGAGTTACAGATAGATATAAGT  948
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GACAAGAGCGTTGGAATCACTGGAAACTAGAGTTACAGATAGATATAAGT  950

seq1  CTCCACATGAGTTATGGCTCTAAACCACTGAGCCATCTCTCCACCCCATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATGAGTTATGGCTCTAAACCACTGAGCCATCTCTCCACCCCATG  1000

seq1  AGCAAGTGGTTTTATACATTGGTGACTATTGGGGTA-TTATTCAGAG-TG  1046
      ||||||||||||||||||||| |||||||||||||| |||||||||| ||
seq2  AGCAAGTGGTTTTATACATTGCTGACTATTGGGGTATTTATTCAGAGTTG  1050

seq1  TTCATGGAGAACCCAAAGAGTTTGCTCTTTGGATTCATGTAATTTTATCA  1096
      ||||| ||||| |||| |||||||||||||||||  |||||| |||||| 
seq2  TTCAT-GAGAA-CCAAGGAGTTTGCTCTTTGGATCAATGTAA-TTTATCC  1097

seq1  AGCTTTCAAATGACT-CTGATGTAAAATAGAGT  1128
      ||  ||| ||||||| ||||||| |||||||||
seq2  AGGCTTC-AATGACTCCTGATGT-AAATAGAGT  1128

BAC Information

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BAC

BAC End Information

Alignment Information