BAC Information

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BAC

Clone NameB6Ng01-284K12
Chromosome14 (Build37)
Map Location 117,113,547 - 117,114,648
singlet/doubletsinglet
Overlap genenone
Upstream geneGpc5
Downstream geneGpc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284K12.bB6Ng01-284K12.g
ACCGA083303GA083304
length1,1981,100
definitionB6Ng01-284K12.b B6Ng01-284K12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacaacaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaaaagta
cttgaagtcctagccagagcaattcgacaacaaaaggagatcaaagggat
acaaattggaaaagaagttaaaatatcactttttgcagatgatatgatag
tatatataagtgaccctaaaaattccacagagaactcctaaactttataa
acagcttcggtgaagtagctggatataaaattaactcaaacaagtcaatg
gcctctctctacacaaagaataagcaggctgagaaagaaattagggaaac
agcacccttctcaatagttacaaataatataaaataccttggcgtgactc
taactaaggaagtgaaatatctgtatgataagaacttcaaggctctgaag
aaagaaattaaggaagatctcagaagatggaaagatctcccatgcaaatg
gattggcaggatcaacattgtaaaaatggctacagattcaatgcaatccc
catcaaaattcaaactcaattcttcaacgaattagaaagagcaatctgca
aattcatctggaatgacaaaaaacctaggatagcaaaaactcttctcaag
gataaaagaacctctggtggaatcaccatgcctgacctaaacctttacta
cagagcaattgtaataaaaacggcatggtactggtatagcaacagacaag
tagaccaatggaatagaattgaagacccagaaatgaacccacacacctat
ggtcacttgatcttccataaagggagctaaaacgtccagtggaaaaaaga
cagcatcttcaacaacgttgctggcacaactggtggttatcatgcagaag
aatgcgcattgatccatttcctatctccttatactaaaggtcaaatctaa
gtggatcaacgagcttccacataaatcaaagacactgaacttagagagga
gaaagtggggaaagcctagatgaatatgttacagggaaaatcctgaatag
aaatagcaatagctgtgctgtagagcgaatgagaatgaaactcatgacct
gccaagcatctgttaaagcaaaagatttccgctcagggaagtaccaag
gaattctcaactgaggaaaatcaaagggctcagaagctcctaaagaaata
ctcacagcaaaataatcacaggaggaaatatggaaataaagattggagca
gaaactgaaggaaagacatgtttcaattttattgtttgtgatttagccag
gtaggaggtatctaacttgaaaccctactatcaggaaggatatttgtggt
ggaaatgtgtctacaaagaatgataattataagtagcttcaagtctctag
ttcagtatatgagaaaaagattttcacgatggatgtttaatataggaact
ccctgttgatacgctattctggggacctgtttatcctcctttgggaggga
gtataggagaccacagctgccagagagttggttcagggaaactgaaagcg
tctcaggctaattgtgttgtaaaactccagccagaaaaaaaaatcactat
gctaaattcccctgacaattgtgggacatctttgggctttgcataatggt
atagttgtcaatcagggcacaaatgagactattttaagagtcttcctatg
gaattttctttgaccaacgaggattttttttttaaaaaatctacttggta
tttgttgttattatggctaaccataatagttaactattggtacaactgtg
aaaaataatagctaaaatgtttaacatttccttcaaaaaatgtatttatt
tttgttaagtgatactttgaaagttgttttaatttctcttattaatttaa
aaaagttatattttacatcattaatagaaataaaaggctttaggttgcaa
gactccgaggtttttacattgggaccacattaacaatgtcattagacagg
aaactaggtgaggcaaaaagtgcacacttagacaactcacccaggttggg
atggcatgaaaggacagggaaagagttatactgagttcatatcctgatgg
ccgacgagtttatggtgtcctgccgaactggtagagcagttaagaattat
gtgtctgctactaccagagagcaaggggcttatattctaagtatttgtac
ttcaaactattttctactcagaggcatacaaacacctgtagaaatagaca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_117113547_117114648
seq2: B6Ng01-284K12.g_67_1166 (reverse)

seq1  TGTCTATTTCTACA-GTGTTTGTAATGCTTCTGAGGTAG-AAATAGTTTT  48
      |||||||||||||| |||||||| |||| ||||| |||| |||||| |||
seq2  TGTCTATTTCTACAGGTGTTTGT-ATGCCTCTGA-GTAGAAAATAG-TTT  47

seq1  GAAGTACAAATACTTAGAATATAAGCCCCTTGCTCTTCTGGTAGTAGCAG  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAAGTACAAATACTTAGAATATAAGCCCCTTGCTC-TCTGGTAGTAGCAG  96

seq1  ACACATAATTCTTAACTGCTCCTACCAGTTCGGCAGGACACCATAAACTC  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACACATAATTCTTAACTGCT-CTACCAGTTCGGCAGGACACCATAAACTC  145

seq1  GTCGGCCATCAGGATATGAACTCAGTATAACTCTTTCCCTGTCC-TTCAT  197
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCGGCCATCAGGATATGAACTCAGTATAACTCTTTCCCTGTCCTTTCAT  195

seq1  GCCATCCAACCCTGGGTGAGTTGTCTAAGTGTGCACTTTTTGCCTCACCT  247
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCAACCTGGGTGAGTTGTCTAAGTGTGCACTTTTTGCCTCACCT  245

seq1  AGTTTCCTGTCTAATGACATTGTTAATGTGGTCCCAATGTAAAAACCTCG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTGTCTAATGACATTGTTAATGTGGTCCCAATGTAAAAACCTCG  295

seq1  GAGTCTTGCAACCTAAAGCCTTTTATTTCTATTAATGATGTAAAATATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTGCAACCTAAAGCCTTTTATTTCTATTAATGATGTAAAATATAA  345

seq1  CTTTTTTAAATTAATAAGAGAAATTAAAACAACTTTCAAAGTATCACTTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAATTAATAAGAGAAATTAAAACAACTTTCAAAGTATCACTTA  395

seq1  ACAAAAATAAATACATTTTTTGAAGGAAATGTTAAACATTTTAGCTATTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATAAATACATTTTTTGAAGGAAATGTTAAACATTTTAGCTATTA  445

seq1  TTTTTCACAGTTGTACCAATAGTTAACTATTATGGTTAGCCATAATAACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACAGTTGTACCAATAGTTAACTATTATGGTTAGCCATAATAACA  495

seq1  ACAAATACCAAGTAGATTTTTTAAAAAAAAAATCCTCGTTGGTCAAAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATACCAAGTAGATTTTTTAAAAAAAAAATCCTCGTTGGTCAAAGAA  545

seq1  AATTCCATAGGAAGACTCTTAAAATAGTCTCATTTGTGCCCTGATTGACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATAGGAAGACTCTTAAAATAGTCTCATTTGTGCCCTGATTGACA  595

seq1  ACTATACCATTATGCAAAGCCCAAAGATGTCCCACAATTGTCAGGGGAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACCATTATGCAAAGCCCAAAGATGTCCCACAATTGTCAGGGGAAT  645

seq1  TTAGCATAGTGATTTTTTTTTCTGGCTGGAGTTTTACAACACAATTAGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATAGTGATTTTTTTTTCTGGCTGGAGTTTTACAACACAATTAGCC  695

seq1  TGAGACGCTTTCAGTTTCCCTGAACCAACTCTCTGGCAGCTGTGGTCTCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACGCTTTCAGTTTCCCTGAACCAACTCTCTGGCAGCTGTGGTCTCC  745

seq1  TATACTCCCTCCCAAAGGAGGATAAACAGGTCCCCAGAATAGCGTATCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCCCTCCCAAAGGAGGATAAACAGGTCCCCAGAATAGCGTATCAA  795

seq1  CAGGGAGTTCCTATATTAAACATCCATCGTGAAAATCTTTTTCTCATATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTTCCTATATTAAACATCCATCGTGAAAATCTTTTTCTCATATA  845

seq1  CTGAACTAGAGACTTGAAGCTACTTATAATTATCATTCTTTGTAGACACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTAGAGACTTGAAGCTACTTATAATTATCATTCTTTGTAGACACA  895

seq1  TTTCCACCACAAATATCCTTCCTGATAGTAGGGTTTCAAGTTAGATACCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCACAAATATCCTTCCTGATAGTAGGGTTTCAAGTTAGATACCT  945

seq1  CCTACCTGGCTAAATCACAAACAATAAAATTGAAACATGTCTTTCCTTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGGCTAAATCACAAACAATAAAATTGAAACATGTCTTTCCTTCA  995

seq1  GTTTCTGCTCCAATCTTTATTTCCATATTTCCTCCTGTGATTATTTTGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCTCCAATCTTTATTTCCATATTTCCTCCTGTGATTATTTTGCT  1045

seq1  GTGAGTATTTCTTTAGGAGCTTCTGAGCCCTTTGATTTTCCTCAGTTGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTATTTCTTTAGGAGCTTCTGAGCCCTTTGATTTTCCTCAGTTGAG  1095

seq1  AATTC  1102
      |||||
seq2  AATTC  1100