BAC Information

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BAC

Clone NameB6Ng01-284M24
Chromosome14 (Build37)
Map Location 90,966,966 - 91,125,002
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451, LOC100043336
Downstream geneEG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284M24.bB6Ng01-284M24.g
ACCGA083423GA083424
length1,1081,157
definitionB6Ng01-284M24.b B6Ng01-284M24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,123,894 - 91,125,002)(90,966,966 - 90,968,128)
sequence
gaattcatcataaaatagaggagtttcctgtatgaccaaggagaaaggga
aaaatagaatgggaaaagtatgatgacaatagctttcctaagagcctgct
ggactttataaacattatattttttttttattaaaagtgaacatctggca
aattaaggtccctccatactgagatgtaatacaaactcaagggcttttct
ggtttcctgttaggaggttaatttagtaattgcaagcacaagcatatata
ggaaatgctaagaacaggagatcattgataggcacataacttttagtcat
ccagaaatcattgtacagctcagttgtttcgtttcaaaatgattgcctta
gctgaaagaaaatcaagtaacaaatattccattctcaaaacacaaagcac
ttcccttttataccattgagtgaagaattccaatttagagcattctgcaa
gctgtaatgaggtacctctctgagcccactgggttattctttcttgctcc
agtttcaaaattgaagagttataatattttgatccaattatatttcatgg
cttacagttcacttacccaataatttcatttacttttatttaactaaata
gttttcatacaatatattttgataatattatttctcttttccccaactca
tcccaggttttctccaactgcctcaccacccaacttcatagtctctccct
tgatccattcatgttctctctattctttctccacttctctcaaataaaat
taaatataaaaatattataatataaattctacgttactcattaaataaat
aaacacaggctaaccatgaaacaaaaataaaacctttattttttttttaa
tattacgacttattgtacactcaatgcttgaattgtttgcaaaatcgtgc
aggtaactcagtgcaatttagcagaattcttactgcagtagagtttggca
tgaagtcttcaagcctggtgagaatttcagacaaataatagtcatccagg
gataaaattttgagatatctgatttttttttgctgttttttaaaaaaaaa
attattgtgagaaatacaacatgttttcacattctcccttctcagcttca
atctattc

gaattcttggaagttaagggaaggatgctgaaacattactcgccacactc
gatggcttttggctggggtgcaggtagtcaagcactcagttttatttaaa
agtctggccaatgggagtttgatcatgctccagtgagtatatgggaaaca
caaactggaattttctttttttagtatctgtttcgtgcggaaacattaca
agtagggcagacccggaacaggaattgaatgtgatcattgttcatgatgt
caatttctcaaataatcaataaaaatattattttggaagaaaaataaaag
accttggaagtctagaaaatataatgaagcataaaaaaggttattgacag
agcttatgacaattggttctcaataaacgtgacttctaatctttcattaa
ctattatattccaactgatgatcttataatttccatacatgaaataaaaa
gaatgttcaattattaatttcttatttagggtatagagcaaatggctttc
agagtttgttagtggatgcctatgtactcttgtcaccatgaagaagcatg
ttgatatgaagacttcccctgatttttattttttatcatttcaggaaaac
ttaccttaaacttcaaaaataatcctactaaatgtcatttatagcttttt
ggctgccacctatacttgaatatatattgcttgaacatattgccaatatc
ttcctaaaatattttatttgtcagtagtgaatatctatctagtcataaca
taaatataaattataatgtgtgcttccattttttgcttcattttgttttg
ttttcttgttttcttttattgactgctagcacatgttcagctttaacacc
cccatactctcctcaacagagacagattttttgcacatttggattggtta
tattttctggaacattaatgcccagatggaaaacgatcaatccactgcag
ccagtgtacatttatgatataaaatttttcagcaaatattttttaactca
gatatttagaatatttggaatagccctaaggatatatttattccagtata
atcattatcctgaatcttaatcagagctgtatttacagaaccctaggtgc
atatagtatcaccatgggattgatgatacttacagtttgaaattgtctaa
atgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_91123894_91125002
seq2: B6Ng01-284M24.b_47_1154 (reverse)

seq1  GAATAGA-TGGAGCTGAG-AGGGAG-ATGTTGAAACATGTTGGTATTTCT  47
      ||||||| || ||||||| |||||| ||||  ||||||||| ||||||||
seq2  GAATAGATTGAAGCTGAGAAGGGAGAATGTGAAAACATGTT-GTATTTCT  49

seq1  CCACAATAA-TTTTTTTTTAAAAAACAGCAAAAAAAAATTCAGATATCTC  96
       |||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  -CACAATAATTTTTTTTTTAAAAAACAGCAAAAAAAAA-TCAGATATCTC  97

seq1  AAAATTTTATCCCTGGATGACCTATTATTTTGTCTGAAATTCTCACCAGG  146
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  AAAATTTTATCCCTGGATGA-CTATTA-TTTGTCTGAAATTCTCACCAGG  145

seq1  CTTGAAGACTTCATGCCAAACTCTACTGCAGTAAGAATTCTGCTAAATTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGACTTCATGCCAAACTCTACTGCAGTAAGAATTCTGCTAAATTG  195

seq1  CACCTGAGTTACCTGCACGATTTTGCAAACAATTCAAGCATTGAGTGTAC  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-CTGAGTTACCTGCACGATTTTGCAAACAATTCAAGCATTGAGTGTAC  244

seq1  AATAAGTCGTAATATT-AAAAAAAAATAAAGGTTTTATTTTTGTTTCATG  295
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATAAGTCGTAATATTAAAAAAAAAATAAAGGTTTTATTTTTGTTTCATG  294

seq1  GTTAGCCTGTGTTTATTTATTTAATGAGTAACGTAGAATTTATATTATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCTGTGTTTATTTATTTAATGAGTAACGTAGAATTTATATTATAA  344

seq1  TATTTTTATATTTAATTTTATTTGAGAGAAGTGGAGAAAGAATAGAGAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATATTTAATTTTATTTGAGAGAAGTGGAGAAAGAATAGAGAGA  394

seq1  ACATGAATGGATCAAGGGAGAGACTATGAAGTTGGGTGGTGAGGCAGTTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATGGATCAAGGGAGAGACTATGAAGTTGGGTGGTGAGGCAGTTG  444

seq1  GAGAAAACCTGGGATGAGTTGGGGAAAAGAGAAATAATATTATCAAAATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACCTGGGATGAGTTGGGGAAAAGAGAAATAATATTATCAAAATA  494

seq1  TATTGTATGAAAACTATTTAGTTAAATAAAAGTAAATGAAATTATTGGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATGAAAACTATTTAGTTAAATAAAAGTAAATGAAATTATTGGGT  544

seq1  AAGTGAACTGTAAGCCATGAAATATAATTGGATCAAAATATTATAACTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACTGTAAGCCATGAAATATAATTGGATCAAAATATTATAACTCT  594

seq1  TCAATTTTGAAACTGGAGCAAGAAAGAATAACCCAGTGGGCTCAGAGAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTGAAACTGGAGCAAGAAAGAATAACCCAGTGGGCTCAGAGAGG  644

seq1  TACCTCATTACAGCTTGCAGAATGCTCTAAATTGGAATTCTTCACTCAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATTACAGCTTGCAGAATGCTCTAAATTGGAATTCTTCACTCAAT  694

seq1  GGTATAAAAGGGAAGTGCTTTGTGTTTTGAGAATGGAATATTTGTTACTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAAAGGGAAGTGCTTTGTGTTTTGAGAATGGAATATTTGTTACTT  744

seq1  GATTTTCTTTCAGCTAAGGCAATCATTTTGAAACGAAACAACTGAGCTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTTTCAGCTAAGGCAATCATTTTGAAACGAAACAACTGAGCTGT  794

seq1  ACAATGATTTCTGGATGACTAAAAGTTATGTGCCTATCAATGATCTCCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATTTCTGGATGACTAAAAGTTATGTGCCTATCAATGATCTCCTG  844

seq1  TTCTTAGCATTTCCTATATATGCTTGTGCTTGCAATTACTAAATTAACCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGCATTTCCTATATATGCTTGTGCTTGCAATTACTAAATTAACCT  894

seq1  CCTAACAGGAAACCAGAAAAGCCCTTGAGTTTGTATTACATCTCAGTATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGGAAACCAGAAAAGCCCTTGAGTTTGTATTACATCTCAGTATG  944

seq1  GAGGGACCTTAATTTGCCAGATGTTCACTTTTAATAAAAAAAAAATATAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACCTTAATTTGCCAGATGTTCACTTTTAATAAAAAAAAAATATAA  994

seq1  TGTTTATAAAGTCCAGCAGGCTCTTAGGAAAGCTATTGTCATCATACTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATAAAGTCCAGCAGGCTCTTAGGAAAGCTATTGTCATCATACTTT  1044

seq1  TCCCATTCTATTTTTCCCTTTCTCCTTGGTCATACAGGAAACTCCTCTAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCTATTTTTCCCTTTCTCCTTGGTCATACAGGAAACTCCTCTAT  1094

seq1  TTTATGATGAATTC  1109
      ||||||||||||||
seq2  TTTATGATGAATTC  1108


seq1: chr14_90966966_90968128
seq2: B6Ng01-284M24.g_65_1221

seq1  GAATTCTTGGAAGTTAAGGGAAGGATGCTGAAACATTACTCGCCACACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAAGTTAAGGGAAGGATGCTGAAACATTACTCGCCACACTC  50

seq1  GATGGCTTTTGGCTGGGGTGCAGGTAGTCAAGCACTCAGTTTTATTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTTTTGGCTGGGGTGCAGGTAGTCAAGCACTCAGTTTTATTTAAA  100

seq1  AGTCTGGCCAATGGGAGTTTGATCATGCTCCAGTGAGTATATGGGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGCCAATGGGAGTTTGATCATGCTCCAGTGAGTATATGGGAAACA  150

seq1  CAAACTGGAATTTTCTTTTTTTAGTATCTGTTTCGTGCGGAAACATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGGAATTTTCTTTTTTTAGTATCTGTTTCGTGCGGAAACATTACA  200

seq1  AGTAGGGCAGACCCGGAACAGGAATTGAATGTGATCATTGTTCATGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGGCAGACCCGGAACAGGAATTGAATGTGATCATTGTTCATGATGT  250

seq1  CAATTTCTCAAATAATCAATAAAAATATTATTTTGGAAGAAAAATAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCTCAAATAATCAATAAAAATATTATTTTGGAAGAAAAATAAAAG  300

seq1  ACCTTGGAAGTCTAGAAAATATAATGAAGCATAAAAAAGGTTATTGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAAGTCTAGAAAATATAATGAAGCATAAAAAAGGTTATTGACAG  350

seq1  AGCTTATGACAATTGGTTCTCAATAAACGTGACTTCTAATCTTTCATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATGACAATTGGTTCTCAATAAACGTGACTTCTAATCTTTCATTAA  400

seq1  CTATTATATTCCAACTGATGATCTTATAATTTCCATACATGAAATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATATTCCAACTGATGATCTTATAATTTCCATACATGAAATAAAAA  450

seq1  GAATGTTCAATTATTAATTTCTTATTTAGGGTATAGAGCAAATGGCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCAATTATTAATTTCTTATTTAGGGTATAGAGCAAATGGCTTTC  500

seq1  AGAGTTTGTTAGTGGATGCCTATGTACTCTTGTCACCATGAAGAAGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGTTAGTGGATGCCTATGTACTCTTGTCACCATGAAGAAGCATG  550

seq1  TTGATATGAAGACTTCCCCTGATTTTTATTTTTTATCATTTCAGGAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATGAAGACTTCCCCTGATTTTTATTTTTTATCATTTCAGGAAAAC  600

seq1  TTACCTTAAACTTCAAAAATAATCCTACTAAATGTCATTTATAGCTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTAAACTTCAAAAATAATCCTACTAAATGTCATTTATAGCTTTTT  650

seq1  GGCTGCCACCTATACTTGAATATATATTGCTTGAACATATTGCCAATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCACCTATACTTGAATATATATTGCTTGAACATATTGCCAATATC  700

seq1  TTCCTAAAATATTTTATTTGTCAGTAGTGAATATCTATCTAGTCATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAATATTTTATTTGTCAGTAGTGAATATCTATCTAGTCATAACA  750

seq1  TAAATATAAATTATAATGTGTGCTTCCATTTTTTGCTTCATTTTGTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAATTATAATGTGTGCTTCCATTTTTTGCTTCATTTTGTTTTG  800

seq1  TTTTCTTGTTTTCTTTTATTGACTGCTAGCACATGTTCAGCTTTAACACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGTTTTCTTTTATTGACTGCTAGCACATGTTCAGCTTTAACACC  850

seq1  CCCATACTCTCCTCAACAGAGACAGA-TTTTTGCACATTTGGATTGGTTA  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCATACTCTCCTCAACAGAGACAGATTTTTTGCACATTTGGATTGGTTA  900

seq1  TATTTTCTGGAACATTAATGCCCAGATGGAAAACGATCAAATCCACTGCA  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATTTTCTGGAACATTAATGCCCAGATGGAAAACGATC-AATCCACTGCA  949

seq1  GGCCAGTGTACATTTTATGAATATAAAATTTTTCAGCAAATA-TTTTTAA  998
       ||||||||||| |||||| |||||||||||||||||||||| |||||||
seq2  -GCCAGTGTACA-TTTATG-ATATAAAATTTTTCAGCAAATATTTTTTAA  996

seq1  CTCAGATATTTAG-ATATTT-GAATAGCCCT-AGGATATATTTATTCAAG  1045
      ||||||||||||| |||||| |||||||||| ||||||||||||||| ||
seq2  CTCAGATATTTAGAATATTTGGAATAGCCCTAAGGATATATTTATTCCAG  1046

seq1  TATAATCATTATTCCTGAAATCTTATCCAGAGCTGTATTTACAG-ACCCT  1094
      ||||||||||| ||||| |||||||  ||||||||||||||||| |||||
seq2  TATAATCATTA-TCCTG-AATCTTAATCAGAGCTGTATTTACAGAACCCT  1094

seq1  AGGTGCCATATTAGTATCACCCATGGGATTAGATGATACATACAGTTTGG  1144
      ||||| |||| |||||||| |||||||||| |||||||| |||||||| |
seq2  AGGTG-CATA-TAGTATCA-CCATGGGATT-GATGATACTTACAGTTT-G  1139

seq1  AAATTGTTTTAAATGAGAA  1163
      |||||| | ||||||||||
seq2  AAATTG-TCTAAATGAGAA  1157


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