BAC Information

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BAC

Clone NameB6Ng01-284N01
Chromosome14 (Build37)
Map Location 120,742,180 - 120,743,282
singlet/doubletsinglet
Overlap geneMbnl2
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneRap2a, LOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284N01.bB6Ng01-284N01.g
ACCGA083425GA083426
length1,1051,164
definitionB6Ng01-284N01.b B6Ng01-284N01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttctaccctgctctcccagtcaagctcagttagacatttccc
cagatgtctctgacctcaagtcagagcttcccaacctcatccatgtgcct
caacaacacacactttcaatctcaccaacgcccctcagtagccatccccc
cacctgacagctacctgatcctcatcttgatctcttgtcaggctgtctgc
aactgtgggatcatcactgctgtgccttttatccatagacagaactcggc
acgcaccaggcacctaataaattcccactagatcatgaagacataggtaa
ggactcgggaagtccgcagggcaaaggccccgagataaggcacagcagaa
aatgaatctgtgggagatataaaagagcaaccctgaccttcaaataactc
gtattcaacgaagcaggagctcggagatggacggagctcagaatgggatt
ccctttcccatcagagaaaatgaaattggacccttgtcctctgaaatcca
cttatctgtcccttcatccactctatgtccaaccaattaaacagacccac
tgtttaaatgacagtgagtttacttcgtgccagagctcatcaagttaacc
tttcagctctgtgcctgcacgcactgtttcagtccacagttctagagtgc
gttggtagatttagctttcttcattttctagtatggggatgaagattccc
aaatagaccatctcaactaaaaatagcatgtgttcttcttaacagaattc
tttgcaactatcttcaattttaaatggaaaaaaaaaaacctcctttcgat
agcatcacttctaacgtcttactcaactataattctattaatgatgaatc
actgatgggccaagaatagatatatgcaaccttctatagcaagttaatgt
atcaaggcaccgtgccactaagctccaaaggtagaaatgtctccctctgg
ggtggggaggcgggacagtttcattagattcttttttataaaaaggcaac
cttggaaaaactccttattatcagaccaccaatcttgtctgttggtccct
ggtgtatatctgattaaagggtatagttactaggaaaactctcattccca
aatta
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaattg
ttcaatatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgacattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcacctat
aagtgaacacattatgactaacagtaccccggagctcttgactctagctg
cattaattatcaaagattgccttgtcgcaatcacttgaagagaggtccca
attgactgccaacttaatgcctagttcaggattcaggttcaaaaggagta
agtggcatgctacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120742180_120743282
seq2: B6Ng01-284N01.b_48_1152 (reverse)

seq1  TAATTTGGGGATGAGAGTTTTTCCTAATTACTTATTAACCTTTAAATCAG  50
      ||||||||| ||||||| |||||||| | || |||  ||| || ||||||
seq2  TAATTTGGGAATGAGAG-TTTTCCTAGTAAC-TAT--ACCCTTTAATCAG  46

seq1  ATATACACAAGGGAACAACAGAACAAGATTGGT-GTCTGAATATAAGGAA  99
      |||||||| ||||| |||||| ||||||||||| ||||||  |||||| |
seq2  ATATACACCAGGGACCAACAG-ACAAGATTGGTGGTCTGATAATAAGG-A  94

seq1  GTTTTTTCAAGGT--GCTTTTTAT-AAAAAGAATCTAATGAAACTGTCCC  146
      |||||| ||||||   |||||||| |||||||||||||||||||||||||
seq2  GTTTTTCCAAGGTTGCCTTTTTATAAAAAAGAATCTAATGAAACTGTCCC  144

seq1  GCCTCCC--ACCCAGA-GGAGACATTTCTACCTTTGGAGCTTAGTGGCAC  193
      |||||||   |||||| |||||||||||||||||||||||||||||||||
seq2  GCCTCCCCACCCCAGAGGGAGACATTTCTACCTTTGGAGCTTAGTGGCAC  194

seq1  GGTG-CTTGATACATTAACTTGCTATAGAAGGTTGCATATATCTATTCTT  242
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTTGATACATTAACTTGCTATAGAAGGTTGCATATATCTATTCTT  244

seq1  GGCCCATCAGTGATTCATCATTAATAGAATTATAGTTGAGTAAGACGTTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATCAGTGATTCATCATTAATAGAATTATAGTTGAGTAAGACGTTA  294

seq1  GAAGTGATGCTATCGAAAGGAGGTTTTTTTTTTTCCATTTAAAATTGAAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATGCTATCGAAAGGAGGTTTTTTTTTTTCCATTTAAAATTGAAG  344

seq1  ATAGTTGCAAAGAATTCTGTTAAGAAGAACACATGCTATTTTTAGTTGAG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGCAAAGAATTCTGTTAAGAAGAACACATGCTATTTTTAGTTGAG  394

seq1  ATGGTCTATTTGGGAATCTTCATCCCCATACTAGAAAATGAAGAAAGCTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTATTTGGGAATCTTCATCCCCATACTAGAAAATGAAGAAAGCTA  444

seq1  AATCTACCAACGCACTCTAGAACTGTGGACTGAAACAGTGCGTGCAGGCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACCAACGCACTCTAGAACTGTGGACTGAAACAGTGCGTGCAGGCA  494

seq1  CAGAGCTGAAAGGTTAACTTGATGAGCTCTGGCACGAAGTAAACTCACTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGAAAGGTTAACTTGATGAGCTCTGGCACGAAGTAAACTCACTG  544

seq1  TCATTTAAACAGTGGGTCTGTTTAATTGGTTGGACATAGAGTGGATGAAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAACAGTGGGTCTGTTTAATTGGTTGGACATAGAGTGGATGAAG  594

seq1  GGACAGATAAGTGGATTTCAGAGGACAAGGGTCCAATTTCATTTTCTCTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGATAAGTGGATTTCAGAGGACAAGGGTCCAATTTCATTTTCTCTG  644

seq1  ATGGGAAAGGGAATCCCATTCTGAGCTCCGTCCATCTCCGAGCTCCTGCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAGGGAATCCCATTCTGAGCTCCGTCCATCTCCGAGCTCCTGCT  694

seq1  TCGTTGAATACGAGTTATTTGAAGGTCAGGGTTGCTCTTTTATATCTCCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGAATACGAGTTATTTGAAGGTCAGGGTTGCTCTTTTATATCTCCC  744

seq1  ACAGATTCATTTTCTGCTGTGCCTTATCTCGGGGCCTTTGCCCTGCGGAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCATTTTCTGCTGTGCCTTATCTCGGGGCCTTTGCCCTGCGGAC  794

seq1  TTCCCGAGTCCTTACCTATGTCTTCATGATCTAGTGGGAATTTATTAGGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGAGTCCTTACCTATGTCTTCATGATCTAGTGGGAATTTATTAGGT  844

seq1  GCCTGGTGCGTGCCGAGTTCTGTCTATGGATAAAAGGCACAGCAGTGATG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGCGTGCCGAGTTCTGTCTATGGATAAAAGGCACAGCAGTGATG  894

seq1  ATCCCACAGTTGCAGACAGCCTGACAAGAGATCAAGATGAGGATCAGGTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACAGTTGCAGACAGCCTGACAAGAGATCAAGATGAGGATCAGGTA  944

seq1  GCTGTCAGGTGGGGGGATGGCTACTGAGGGGCGTTGGTGAGATTGAAAGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGGTGGGGGGATGGCTACTGAGGGGCGTTGGTGAGATTGAAAGT  994

seq1  GTGTGTTGTTGAGGCACATGGATGAGGTTGGGAAGCTCTGACTTGAGGTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGTTGAGGCACATGGATGAGGTTGGGAAGCTCTGACTTGAGGTC  1044

seq1  AGAGACATCTGGGGAAATGTCTAACTGAGCTTGACTGGGAGAGCAGGGTA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATCTGGGGAAATGTCTAACTGAGCTTGACTGGGAGAGCAGGGTA  1094

seq1  GAAATGAATTC  1103
      |||||||||||
seq2  GAAATGAATTC  1105