BAC Information

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BAC

Clone NameB6Ng01-284N11
Chromosome14 (Build37)
Map Location 23,855,747 - 23,991,729
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneEG435392, LOC665068
Downstream geneKcnma1, LOC620499, Dlg5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284N11.bB6Ng01-284N11.g
ACCGA083443GA083444
length1,154484
definitionB6Ng01-284N11.b B6Ng01-284N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,990,581 - 23,991,729)(23,855,747 - 23,856,236)
sequence
gaattcagtactggtgttagaaaagtctggattcacagtatgaatcttct
acttattgcaaacatttgaaatgattagaaacctcagtctcagagcactc
agtgttaagatttgacctcctcccagtaccacacaaacttcttgtaatat
aaacgagatgactctgttgtggtttcatggcatagagtatggccatagca
ggggcttggtcatttggtttctatctcattccactcttttgctgtgtgtt
aaaactctatcttcatctctaccacattataaagcccaaaggacatcttt
actgtagtatgactttcccttaacataggaaacatttattataacttagt
tgtggccatagtaaatatttttcattaccaacaaggagatgtgatcctag
aacctcagggccttgatactgtcaggaccatccaagagagcctggtgggt
gactgacagagcaactggagagtagtttttaaatccctgctggagctcta
cataacaccagttggggaaccacagagtccaacaacaacaattatccagc
ctcattttctcttctttcagtagatacttaattggcatctgttaatcaac
ttgaccagattccagtaatcacaacttattttccaatttgacaggacatg
ctcagaggaaaagaataaaagagcgcacagggggatagatgtagcaacag
ataatcaacatttttaattgaattcgaggtttgatcttaagcctctcatt
gcagtgtctatattgaatctatcattagcagaataattctattttctttt
tctcattactttaaattggccggcaaaagaaaagtaggattccagacaag
catgcttattggggaaaataactgaactgattgaagcaatagtttaatcc
tgtgcgttctaatataatcttttacaatgtggaaaatgtgctgttctaca
tgatacagtgactgttagaaatatgagcattgggaagtatggctggcaca
acagaagagctaagaataattttaattttatttattattacattaatttc
agtaagaatatgttggcctagatacatgaggagtgacacagacatgagct
acagaaggagtctttgttggctaaatgtttttcagaagtttcacgttgaa
cctg
ttggagggcatcactctgcccccccccaacaaattccctcaatttaaaaa
atttcttagccagacagtggtggcacatacctttaatctcagcacttggg
agacagaggcaggtggttttctgagtttgaggccagcctggtcttcagag
tgagttccagaatagacacagctacacagagaaaccctgtctcgaaacaa
acaaacaaacaaacaaacaaacaaaacaaaaaaaaaccaaacaaacaaac
gaaaaaattgtttttcttttgtctcattgtaaaactccctgaaaaacctt
ggtaaacttaattccttcactctgagctctgcctggaaataccaacgagc
gtgattgcacctgtgacccccaggaagcaatccactactgacttctagat
ttctctacagttttgtgtgtttgtttgtttgtatttttaacattggaaat
atgctgacatttggaatgaagctgaaggacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23990581_23991729
seq2: B6Ng01-284N11.b_46_1199 (reverse)

seq1  CAGGCTCAACGTGAAAACTCTG-AAAACATTTAGCAAAC-AAGACTCTTT  48
      |||| |||||||||||  |||| |||||||||||| ||| ||||||| ||
seq2  CAGGTTCAACGTGAAACTTCTGAAAAACATTTAGCCAACAAAGACTCCTT  50

seq1  CTGTGGCTTCATGTCTGTGTCACTCCTCATGGTATCTAG--CCACATATT  96
      |||| || |||||||||||||||||||||| ||||||||  | |||||||
seq2  CTGTAGC-TCATGTCTGTGTCACTCCTCAT-GTATCTAGGCCAACATATT  98

seq1  CCTACTGAAATTAATGT-ATAATAAATAAAATTAAAATTATTC-TAGCTC  144
      | ||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  CTTACTGAAATTAATGTAATAATAAATAAAATTAAAATTATTCTTAGCTC  148

seq1  TTCTGTTGTGCCAGCCATACTT-CCAATGCTCATATTTCTAACAGTCACT  193
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCTGTTGTGCCAGCCATACTTCCCAATGCTCATATTTCTAACAGTCACT  198

seq1  GTATCATGTAGAACAGCACATTTTCCACATTGTAAAAGATTATATTAGAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATGTAGAACAGCACATTTTCCACATTGTAAAAGATTATATTAGAA  248

seq1  CGCACAGGATTAAACTATTGCTTCAATCAGTTCAGTTATTTTCCCCAATA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAGGATTAAACTATTGCTTCAATCAGTTCAGTTATTTTCCCCAATA  298

seq1  AGCATGCTTGTCTGGAATCCTACTTTTCTTTTGCCGGCCAATTTAAAGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCTTGTCTGGAATCCTACTTTTCTTTTGCCGGCCAATTTAAAGTA  348

seq1  ATGAGAAAAAGAAAATAGAATTATTCTGCTAATGATAGATTCAATATAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAAAGAAAATAGAATTATTCTGCTAATGATAGATTCAATATAGA  398

seq1  CACTGCAATGAGAGGCTTAAGATCAAACCTCGAATTCAATTAAAAATGTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAATGAGAGGCTTAAGATCAAACCTCGAATTCAATTAAAAATGTT  448

seq1  GATTATCTGTTGCTACATCTATCCCCCTGTGCGCTCTTTTATTCTTTTCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCTGTTGCTACATCTATCCCCCTGTGCGCTCTTTTATTCTTTTCC  498

seq1  TCTGAGCATGTCCTGTCAAATTGGAAAATAAGTTGTGATTACTGGAATCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCATGTCCTGTCAAATTGGAAAATAAGTTGTGATTACTGGAATCT  548

seq1  GGTCAAGTTGATTAACAGATGCCAATTAAGTATCTACTGAAAGAAGAGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGTTGATTAACAGATGCCAATTAAGTATCTACTGAAAGAAGAGAA  598

seq1  AATGAGGCTGGATAATTGTTGTTGTTGGACTCTGTGGTTCCCCAACTGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCTGGATAATTGTTGTTGTTGGACTCTGTGGTTCCCCAACTGGT  648

seq1  GTTATGTAGAGCTCCAGCAGGGATTTAAAAACTACTCTCCAGTTGCTCTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTAGAGCTCCAGCAGGGATTTAAAAACTACTCTCCAGTTGCTCTG  698

seq1  TCAGTCACCCACCAGGCTCTCTTGGATGGTCCTGACAGTATCAAGGCCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCACCCACCAGGCTCTCTTGGATGGTCCTGACAGTATCAAGGCCCT  748

seq1  GAGGTTCTAGGATCACATCTCCTTGTTGGTAATGAAAAATATTTACTATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCTAGGATCACATCTCCTTGTTGGTAATGAAAAATATTTACTATG  798

seq1  GCCACAACTAAGTTATAATAAATGTTTCCTATGTTAAGGGAAAGTCATAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAACTAAGTTATAATAAATGTTTCCTATGTTAAGGGAAAGTCATAC  848

seq1  TACAGTAAAGATGTCCTTTGGGCTTTATAATGTGGTAGAGATGAAGATAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAAGATGTCCTTTGGGCTTTATAATGTGGTAGAGATGAAGATAG  898

seq1  AGTTTTAACACACAGCAAAAGAGTGGAATGAGATAGAAACCAAATGACCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAACACACAGCAAAAGAGTGGAATGAGATAGAAACCAAATGACCA  948

seq1  AGCCCCTGCTATGGCCATACTCTATGCCATGAAACCACAACAGAGTCATC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGCTATGGCCATACTCTATGCCATGAAACCACAACAGAGTCATC  998

seq1  TCGTTTATATTACAAGAAGTTTGTGTGGTACTGGGAGGAGGTCAAATCTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTATATTACAAGAAGTTTGTGTGGTACTGGGAGGAGGTCAAATCTT  1048

seq1  AACACTGAGTGCTCTGAGACTGAGGTTTCTAATCATTTCAAATGTTTGCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAGTGCTCTGAGACTGAGGTTTCTAATCATTTCAAATGTTTGCA  1098

seq1  ATAAGTAGAAGATTCATACTGTGAATCCAGACTTTTCTAACACCAGTACT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGAAGATTCATACTGTGAATCCAGACTTTTCTAACACCAGTACT  1148

seq1  GAATTC  1149
      ||||||
seq2  GAATTC  1154

seq1: chr14_23855747_23856236
seq2: B6Ng01-284N11.g_66_555

seq1  GAATTCTTGGAGGGCATCACTCTGCCCCCCCCCAACAAATTCCCTCAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAGGGCATCACTCTGCCCCCCCCCAACAAATTCCCTCAATT  50

seq1  TAAAAAATTTCTTAGCCAGACAGTGGTGGCACATACCTTTAATCTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTTCTTAGCCAGACAGTGGTGGCACATACCTTTAATCTCAGCA  100

seq1  CTTGGGAGACAGAGGCAGGTGGTTTTCTGAGTTTGAGGCCAGCCTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGACAGAGGCAGGTGGTTTTCTGAGTTTGAGGCCAGCCTGGTCT  150

seq1  TCAGAGTGAGTTCCAGAATAGACACAGCTACACAGAGAAACCCTGTCTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGAGTTCCAGAATAGACACAGCTACACAGAGAAACCCTGTCTCG  200

seq1  AAACAAACAAACAAACAAACAAACAAACAAAACAAAAAAAAACCAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAACAAACAAACAAAACAAAAAAAAACCAAACAA  250

seq1  ACAAACGAAAAAATTGTTTTTCTTTTGTCTCATTGTAAAACTCCCTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACGAAAAAATTGTTTTTCTTTTGTCTCATTGTAAAACTCCCTGAAA  300

seq1  AACCTTGGTAAACTTAATTCCTTCACTCTGAGCTCTGCCTGGAAATACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGTAAACTTAATTCCTTCACTCTGAGCTCTGCCTGGAAATACCA  350

seq1  ACGAGCGTGATTGCACCTGTGACCCCCAGGAAGCAATCCACTACTGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGCGTGATTGCACCTGTGACCCCCAGGAAGCAATCCACTACTGACTT  400

seq1  CTAGATTTCTCTACAGTTTTGTGTGTTTGTTTGTTTGTATTTTTAACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTCTCTACAGTTTTGTGTGTTTGTTTGTTTGTATTTTTAACATT  450

seq1  GGAAATATGCTGACATTTGGAATGTAGCTGAAGGACACAT  490
      |||||||||||||||||||||||| |||||||||||||||
seq2  GGAAATATGCTGACATTTGGAATGAAGCTGAAGGACACAT  490