BAC Information

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BAC

Clone NameB6Ng01-285D11
Chromosome14 (Build37)
Map Location 90,026,644 - 90,201,241
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285D11.bB6Ng01-285D11.g
ACCGA083722GA083723
length1,1721,090
definitionB6Ng01-285D11.b B6Ng01-285D11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,200,067 - 90,201,241)(90,026,644 - 90,027,741)
sequence
gaattcattccatttagttcaggtcagcagtggcaggttaagccagaaaa
taggaaggtgccaaaatactagaacaaatcattggtgttaatttgaggcc
aagtcgaacaattcagtgagaaactgagagaagcctcattgaaccattcg
gtttggagaggtgtttgacttagaactgctgagtttaaccagctagtcaa
aattcaataagcatgatcacatcatgctaatcaaagatatttttacacat
cctgagtgcagccttccctccaagaaacccgctcatcatccatacacaca
cagccctttcccccagatccaatgttcttccatttcccttctgagaagag
caggcctcccactgataacaactgaacatggattagcataatgcagtaag
aatgggtacagcaaagctgtatgatgcaacccagtagaagaaggttacca
agagcaggcaaaaaagtcatagacattccacttccactgttagaagtcaa
agaagaatctcaagctaaacaaccacaaaatgtatgcagagatcctagga
gtaacccatgcaaaatatgtgcttcaaactctgtgagatcatatgagccc
tgcaggaaaattagtctttgtattttgctatgcatatcttaatgactata
gttaaaactatttaacaacattagtaaatacatcttaaagtgattaatta
ttaagggagtttaaataaatataaatataatgtatttgcaatattgattt
ctatgatttaacttttctttgtagaatccttgtgctgattaaaatgtaac
tctgaaactcctctgctaggcacttctgatctctaatgaaggagttcact
ataccagtcatttcatttaaatagaatattgtctttttcttttagtaact
tgtttggcataatgattataaagttgttatagctagtatttgtcttcatc
cagtatttgctccagggtttcgctttctctttgtacactttgctttgtaa
gttttacatcactaaatctactgcagttctttggtgtgactatcctcact
agcccacaaaaatgttctatgctgtgattttttatactactttttctgat
gctaccacttttccactggaccaaatttccttacaaacacaggccagaca
caatattaacagaaaattgttg

gaattcctagctccatgtacactcctttaattgctttgaagctgtataga
atactgagagaacggccctcaataccttctgttttaacaaattggactgg
ccaattcttcagtctccctgtgcctgaaacaagtttctgcctttagtcct
ttagaaggtccttggactaccagcgtgggcttgccaatctcttcctttga
gctctgtggattttatcccttaatttcaccagaccacaatcataagcatg
ctcaatcaatgcaggtttagtgtgacaaacagagtctaatactctaaatc
ccaatttaaaaattcacccaagacatgaaaaaaaaaaaaagcaccattgc
tgtcaaaaataacccttaaaattattcagggtcaaacacctgcacatgga
aacagacaaatgtgtatgtgtatagcttctaagatcctctcagtgattca
aatacacatctgtttaaatatcctttataaattatttataatttgtataa
attatatcaattttagcatttgtataaaactgtcattcaataattatact
ttaaatattctccaaattgtttataatatataatgcaatatatcccacag
aagacatctccattctctgactcttataatcttcccatttcttctatcac
aatgtttcccgatctttatgtgtatgcagttatggtcagttattgtcaca
atcctgtgaggatacagaggaaagaaagagatgtgaggaaatgatataat
tgcaatatccataaaagaaactttgaaaaaaaatgcacgttattattgtt
actccaataacaataaaaaataattagtatattctcagttagatggctat
ttattcctaaattatcaacacctgattaaatgaaaaaaaaaagctctgta
atagtatacgtgtgtatttattttgtgtgtgtttgtgtgttccatgtgtc
tgtctttaaatttgatataatgcattccccctctttctactacctatgga
tctaggtatcctcgaattattatatatttcagtgttcatactatatctac
tgcctctgactctcttctctcattacttgaatctagttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90200067_90201241
seq2: B6Ng01-285D11.b_47_1218 (reverse)

seq1  CAACA--TTTCTG-TAATAT--TGTCTGCCCTGTGTTTGTAAGAAAATAT  45
      |||||  |||||| ||||||  |||||| |||||||||||||| |||| |
seq2  CAACAATTTTCTGTTAATATTGTGTCTGGCCTGTGTTTGTAAGGAAATTT  50

seq1  TGTTCAGTGGGAAAAGT-GTAGCATCAGGAAAAAGTAGTATAAAAATTCA  94
       || |||| |||||||| ||||||||| |||||||||||||||||| |||
seq2  GGTCCAGT-GGAAAAGTGGTAGCATCA-GAAAAAGTAGTATAAAAAATCA  98

seq1  CAGCATAGAACATTTTTGTGGGCTAGTGAGAATTAGTCAACACCAAAGAA  144
      |||||||||||||||||||||||||||||| | ||||| |||||||||||
seq2  CAGCATAGAACATTTTTGTGGGCTAGTGAGGA-TAGTC-ACACCAAAGAA  146

seq1  CCTGCAGTAGATTTTAGTGATGTAAAACTTACAAAGCAAAGTGTACAAAA  194
       |||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  -CTGCAGTAGA-TTTAGTGATGTAAAACTTACAAAGCAAAGTGTAC-AAA  193

seq1  GAGAAAGCGAAACCCTGGAGCAAATACTGGATTGAAGACAAATACTAGCT  244
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGAAAGCGAAACCCTGGAGCAAATACTGGA-TGAAGACAAATACTAGCT  242

seq1  ATAACAACTTTATAATCATTATGCCAAACAAGTTACTAAAAGAAAAAGAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACTTTATAATCATTATGCCAAACAAGTTACTAAAAGAAAAAGAC  292

seq1  AATATTCTATTTAAATGAAATGACTGGTATAGTGAACTCCTTCATTAGAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTATTTAAATGAAATGACTGGTATAGTGAACTCCTTCATTAGAG  342

seq1  ATCAGAAGTGCCTAGCAGAGGAGTTTCAGAGTTACATTTTAATCAGCACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGTGCCTAGCAGAGGAGTTTCAGAGTTACATTTTAATCAGCACA  392

seq1  AGGATTCTACAAAGAAAAGTTAAATCATAGAAATCAATATTGCAAATACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTACAAAGAAAAGTTAAATCATAGAAATCAATATTGCAAATACA  442

seq1  TTATATTTTATATTTATTTAAACTCCCTTAATAATTAATCACTTTAAGAT  494
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATA-TTTATATTTATTTAAACTCCCTTAATAATTAATCACTTTAAGAT  491

seq1  GTATTTACTAATGTTGTTAAATAGTTTTAACTATAGTCATTAAGATATGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTACTAATGTTGTTAAATAGTTTTAACTATAGTCATTAAGATATGC  541

seq1  ATAGCAAAATACAAAGACTAATTTTCCTGCAGGGCTCATATGATCTCACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAAATACAAAGACTAATTTTCCTGCAGGGCTCATATGATCTCACA  591

seq1  GAGTTTGAAGCACATATTTTGCATGGGTTACTCCTAGGATCTCTGCATAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGAAGCACATATTTTGCATGGGTTACTCCTAGGATCTCTGCATAC  641

seq1  ATTTTGTGGTTGTTTAGCTTGAGATTCTTCTTTGACTTCTAACAGTGGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGGTTGTTTAGCTTGAGATTCTTCTTTGACTTCTAACAGTGGAA  691

seq1  GTGGAATGTCTATGACTTTTTTGCCTGCTCTTGGTAACCTTCTTCTACTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATGTCTATGACTTTTTTGCCTGCTCTTGGTAACCTTCTTCTACTG  741

seq1  GGTTGCATCATACAGCTTTGCTGTACCCATTCTTACTGCATTATGCTAAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCATCATACAGCTTTGCTGTACCCATTCTTACTGCATTATGCTAAT  791

seq1  CCATGTTCAGTTGTTATCAGTGGGAGGCCTGCTCTTCTCAGAAGGGAAAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCAGTTGTTATCAGTGGGAGGCCTGCTCTTCTCAGAAGGGAAAT  841

seq1  GGAAGAACATTGGATCTGGGGGAAAGGGCTGTGTGTGTATGGATGATGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAACATTGGATCTGGGGGAAAGGGCTGTGTGTGTATGGATGATGAG  891

seq1  CGGGTTTCTTGGAGGGAAGGCTGCACTCAGGATGTGTAAAAATATCTTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTCTTGGAGGGAAGGCTGCACTCAGGATGTGTAAAAATATCTTTG  941

seq1  ATTAGCATGATGTGATCATGCTTATTGAATTTTGACTAGCTGGTTAAACT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATGATGTGATCATGCTTATTGAATTTTGACTAGCTGGTTAAACT  991

seq1  CAGCAGTTCTAAGTCAAACACCTCTCCAAACCGAATGGTTCAATGAGGCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTCTAAGTCAAACACCTCTCCAAACCGAATGGTTCAATGAGGCT  1041

seq1  TCTCTCAGTTTCTCACTGAATTGTTCGACTTGGCCTCAAATTAACACCAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGTTTCTCACTGAATTGTTCGACTTGGCCTCAAATTAACACCAA  1091

seq1  TGATTTGTTCTAGTATTTTGGCACCTTCCTATTTTCTGGCTTAACCTGCC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTTCTAGTATTTTGGCACCTTCCTATTTTCTGGCTTAACCTGCC  1141

seq1  ACTGCTGACCTGAACTAAATGGAATGAATTC  1175
      |||||||||||||||||||||||||||||||
seq2  ACTGCTGACCTGAACTAAATGGAATGAATTC  1172


seq1: chr14_90026644_90027741
seq2: B6Ng01-285D11.g_64_1153

seq1  GAATTCCTAGCTCCATGTACACTCCTTTAATTGCTTTGAAGCTGTATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCTCCATGTACACTCCTTTAATTGCTTTGAAGCTGTATAGA  50

seq1  ATACTGAGAGAACGGCCCTCAATACCTTCTGTTTTAACAAATTGGACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAGAGAACGGCCCTCAATACCTTCTGTTTTAACAAATTGGACTGG  100

seq1  CCAATTCTTCAGTCTCCCTGTGCCTGAAACAAGTTTCTGCCTTTAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCTTCAGTCTCCCTGTGCCTGAAACAAGTTTCTGCCTTTAGTCCT  150

seq1  TTAGAAGGTCCTTGGACTACCAGCGTGGGCTTGCCAATCTCTTCCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGTCCTTGGACTACCAGCGTGGGCTTGCCAATCTCTTCCTTTGA  200

seq1  GCTCTGTGGATTTTATCCCTTAATTTCACCAGACCACAATCATAAGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGGATTTTATCCCTTAATTTCACCAGACCACAATCATAAGCATG  250

seq1  CTCAATCAATGCAGGTTTAGTGTGACAAACAGAGTCTAATACTCTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCAATGCAGGTTTAGTGTGACAAACAGAGTCTAATACTCTAAATC  300

seq1  CCAATTTAAAAATTCACCCAAGACATGAAAAAAAAAAAAAGCACCATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTAAAAATTCACCCAAGACATGAAAAAAAAAAAAAGCACCATTGC  350

seq1  TGTCAAAAATAACCCTTAAAATTATTCAGGGTCAAACACCTGCACATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAAATAACCCTTAAAATTATTCAGGGTCAAACACCTGCACATGGA  400

seq1  AACAGACAAATGTGTATGTGTATAGCTTCTAAGATCCTCTCAGTGATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAAATGTGTATGTGTATAGCTTCTAAGATCCTCTCAGTGATTCA  450

seq1  AATACACATCTGTTTAAATATCCTTTATAAATTATTTATAATTTGTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACATCTGTTTAAATATCCTTTATAAATTATTTATAATTTGTATAA  500

seq1  ATTATATCAATTTTAGCATTTGTATAAAACTGTCATTCAATAATTATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCAATTTTAGCATTTGTATAAAACTGTCATTCAATAATTATACT  550

seq1  TTAAATATTCTCCAAATTGTTTATAATATATAATGCAATATATCCCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATTCTCCAAATTGTTTATAATATATAATGCAATATATCCCACAG  600

seq1  AAGACATCTCCATTCTCTGACTCTTATAATCTTCCCATTTCTTCTATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCTCCATTCTCTGACTCTTATAATCTTCCCATTTCTTCTATCAC  650

seq1  AATGTTTCCCGATCTTTATGTGTATGCAGTTATGGTCAGTTATTGTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCCCGATCTTTATGTGTATGCAGTTATGGTCAGTTATTGTCACA  700

seq1  ATCCTGTGAGGATACAGAGGAAAGAAAGAGATGTGAGGAAATGATATAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGAGGATACAGAGGAAAGAAAGAGATGTGAGGAAATGATATAAT  750

seq1  TGCAATATCCATAAAAGAAACTTTGAAAAAAAATGCACGTTATTATTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATCCATAAAAGAAACTTTGAAAAAAAATGCACGTTATTATTGTT  800

seq1  ACTCCAATAACAATAAAAAATAATTAGTATATTCTCAGTTAGATGGCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAATAACAATAAAAAATAATTAGTATATTCTCAGTTAGATGGCTAT  850

seq1  TTATTCCTAAATTATCAACACCTGATTAAATGAAAAAAAAAAGCTCTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTATTCCTAAATTATCAACACCTGATTAAATGAAAAAAAAAAGCTCTGT-  899

seq1  AATAGTATACGTGTGTATTTATTTTGTGTGTGTTTGTGTGTTCCATGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATACGTGTGTATTTATTTTGTGTGTGTTTGTGTGTTCCATGTGT  949

seq1  CTGTCTTTAAATTTTGATATAATGCATTCCCCTCTTTTCTACTTACCTAT  1000
      ||||||||||| ||||||||||||||||||||   ||||||| |||||||
seq2  CTGTCTTTAAA-TTTGATATAATGCATTCCCCCTCTTTCTAC-TACCTAT  997

seq1  GGAATCTAGGTAT-CTCG-ATTATTATATATTTCCAGTGTTTCATTACTA  1048
      || |||||||||| |||| |||||||||||||| ||||| |||| |||||
seq2  GG-ATCTAGGTATCCTCGAATTATTATATATTT-CAGTG-TTCA-TACTA  1043

seq1  TAATCTACTGCCTCTGACCTCTCTTCTCTCAATACCTGAAATCTAGTTAT  1098
      | ||||||||||||||| ||||||||||||| ||| || |||||||||||
seq2  T-ATCTACTGCCTCTGA-CTCTCTTCTCTCATTACTTG-AATCTAGTTAT  1090


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