BAC Information

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BAC

Clone NameB6Ng01-286E05
Chromosome14 (Build37)
Map Location 14,291,779 - 14,292,929
singlet/doubletsinglet
Overlap geneSynpr
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354
Downstream geneA430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286E05.bB6Ng01-286E05.g
ACCGA084506GA084507
length1,1391,042
definitionB6Ng01-286E05.b B6Ng01-286E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatagagccttgggcaagtcaccaagctttgctttttccttc
ttcttaaagaaattaactcagagttttttgaggacatgagattgaggctg
taatttgtttccttctgggatgatcactcatacagcaggtctaaccctac
agcaaagacaactgatgcccctgcagtttctaccatatatcactttatac
cccagaatctttacaggtgtaaggtgaccatctgaaaccacccagctaat
gctgctgaggtagcaggccaaggctccaccacccttgcctctatcactcc
ttggtaaatggcctttactactcaaaaatagactaaaagagaaaatggta
cactgtaattatatctgcatttttcattaaatgttataattttgaatgat
tttgagaaaacattcaaattttaggatatattagtgtgaatcaagttcta
ttcaattttggctgcaaggctttagacacataatcacgttttaggtgtct
gccagtcatttgctaaaggagatatattttaatattgtctcatttgttgt
ttgctaggacataatgagataagataagatatccagagtagtaaagtgtt
gcacaaaagggtagattcagggagaagctcacagatgctccactacacag
aagcacggggtagtgaccgggagaagcttacaggtgctccacaagcttca
aacaagctgtagcagtaagaaaactacaaatctaagaatcctaacattaa
aagaaatgccacaggaagaatcagccaaaggtaattagtaagtgtctggc
aatggttctcttctgatagaaaagcagtttggtgaaggcttttgacaatt
taggtcgtcttagcttagggtaagaggtggctactgacatctagtgggta
gagcccatgaaagctactaatattccacaatgagatttcaccacaatgaa
tgatatgggaacacactaatagtgctaggattgcataatcttggactata
gaagttcctcaagttcagaaagagtgaaccttgttattcccatgctgtag
tatctggtatattgctcagtaagacagatccttcaatccatctgaatgaa
gaccaagaaaccgattatccagcaagacagtcctgttgt
gaattctgttcttgtggctgtcttctttttggtttgttgaaggattactt
tcttgctttttctagggcgtggtttccatccttgtattgttttttttttt
ctgttattatcctttgaagggctggatttgtggaaagataatgtgtgaat
ttggttttgtcgtggaatattttggtttctccatctatggtaattgagag
tttggctgagtatagtaacctggactggcatttgtgttctcttagtgtct
gtataacatctgttcaggatcttctggctttcatagtctctggtgaaaag
tctggtgtaattctgataggcctgcctttatttgttacttgacctttttc
ccttactgctttcaatattctatctttatttagtgcatttgttattctga
ttattatgtgtcggtaggaatttcatttctggttcagtctatttgtagtt
ctgtaggcttcttgtatgttcatgggcatgtctttctttaggtttgggaa
gttttcatctataattttgttgaagatattttctggccctttaagttgaa
aatcttcattctcatctactcctattatccataggttttgtcttctaatt
gtgtcctggatttcctggatgttttgagttaggatctttttgcattttgt
gttttctttttttgttgtgccgatgttctctatggaaccttctgcacctg
agattctctcttccatctcttgtattctgctgctgatgcttgcatcagat
ttctttttctaatgtttctatatccagcgttgcctcactttggttttttt
tttttattgtgtctacttccctctttaggttttggatggtttttattcaa
ttccatcacttgtttttgtcgtctttttcctgcaattcttgaaagggatt
ttttgtgcttctttctttaaggtctttctacctgttttagcagtgttctc
ctgtatttctttaagtggagtatacagtccttcttgatgtcctctaccat
catcatgagagataatgcttttaatcagggtcttatcttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14291779_14292929
seq2: B6Ng01-286E05.b_47_1185 (reverse)

seq1  ACAACCAGGACTGTCTTGCTTGTATTATCTGTTTTTCTTTGGTCTTCATT  50
      |||| |||||||||||||| || || ||| ||||    ||||||||||||
seq2  ACAA-CAGGACTGTCTTGC-TGGATAATCGGTTT---CTTGGTCTTCATT  45

seq1  CAGATGGTTTTGGAGGATCCTGTCTGTACTGAGCATATTACCAGATACTA  100
      |||||||  ||| ||||| |||||| |||||||||   ||||||||||||
seq2  CAGATGG-ATTGAAGGAT-CTGTCT-TACTGAGCAATATACCAGATACTA  92

seq1  CAGCATGGGAATAAACAAGGTTCACCTCTTTCTGAACCTGAGGAACTTCT  150
      |||||||||||| ||||||||||| |||||||||||| ||||||||||||
seq2  CAGCATGGGAAT-AACAAGGTTCA-CTCTTTCTGAACTTGAGGAACTTCT  140

seq1  AATAGTCCAAGATTATGCAATCCTAGCACTATTAGTGTGTTCCCATATCA  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATAGTCCAAGATTATGCAATCCTAGCACTATTAGTGTGTTCCCATATCA  189

seq1  TTCATTGTGGTGAAATCTCATTGTGGAATATTTAGTAGCTTTCATGGGCT  250
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCATTGTGGTGAAATCTCATTGTGGAATA-TTAGTAGCTTTCATGGGCT  238

seq1  CTACCCACTAGATGTCAGTAGCCACCTCTTACCCTAAGCTAAGACGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACTAGATGTCAGTAGCCACCTCTTACCCTAAGCTAAGACGACCT  288

seq1  AAATTGTCAAAAGCCTTCACCAAACTGCTTTTCTATCAGAAGAGAACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCAAAAGCCTTCACCAAACTGCTTTTCTATCAGAAGAGAACCAT  338

seq1  TGCCAGACACTTACTAATTACCTTTGGCTGATTCTTCCTGTGGCATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGACACTTACTAATTACCTTTGGCTGATTCTTCCTGTGGCATTTCT  388

seq1  TTTAATGTTAGGATTCTTAGATTTGTAGTTTTCTTACTGCTACAGCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTAGGATTCTTAGATTTGTAGTTTTCTTACTGCTACAGCTTGT  438

seq1  TTGAAGCTTGTGGAGCACCTGTAAGCTTCTCCCGGTCACTACCCCGTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTTGTGGAGCACCTGTAAGCTTCTCCCGGTCACTACCCCGTGCT  488

seq1  TCTGTGTAGTGGAGCATCTGTGAGCTTCTCCCTGAATCTACCCTTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGTGGAGCATCTGTGAGCTTCTCCCTGAATCTACCCTTTTGTG  538

seq1  CAACACTTTACTACTCTGGATATCTTATCTTATCTCATTATGTCCTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTTACTACTCTGGATATCTTATCTTATCTCATTATGTCCTAGCA  588

seq1  AACAACAAATGAGACAATATTAAAATATATCTCCTTTAGCAAATGACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAATGAGACAATATTAAAATATATCTCCTTTAGCAAATGACTGG  638

seq1  CAGACACCTAAAACGTGATTATGTGTCTAAAGCCTTGCAGCCAAAATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACCTAAAACGTGATTATGTGTCTAAAGCCTTGCAGCCAAAATTGA  688

seq1  ATAGAACTTGATTCACACTAATATATCCTAAAATTTGAATGTTTTCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACTTGATTCACACTAATATATCCTAAAATTTGAATGTTTTCTCAA  738

seq1  AATCATTCAAAATTATAACATTTAATGAAAAATGCAGATATAATTACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTCAAAATTATAACATTTAATGAAAAATGCAGATATAATTACAGT  788

seq1  GTACCATTTTCTCTTTTAGTCTATTTTTGAGTAGTAAAGGCCATTTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTTTCTCTTTTAGTCTATTTTTGAGTAGTAAAGGCCATTTACCA  838

seq1  AGGAGTGATAGAGGCAAGGGTGGTGGAGCCTTGGCCTGCTACCTCAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGATAGAGGCAAGGGTGGTGGAGCCTTGGCCTGCTACCTCAGCAG  888

seq1  CATTAGCTGGGTGGTTTCAGATGGTCACCTTACACCTGTAAAGATTCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTGGGTGGTTTCAGATGGTCACCTTACACCTGTAAAGATTCTGG  938

seq1  GGTATAAAGTGATATATGGTAGAAACTGCAGGGGCATCAGTTGTCTTTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAAGTGATATATGGTAGAAACTGCAGGGGCATCAGTTGTCTTTGC  988

seq1  TGTAGGGTTAGACCTGCTGTATGAGTGATCATCCCAGAAGGAAACAAATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGTTAGACCTGCTGTATGAGTGATCATCCCAGAAGGAAACAAATT  1038

seq1  ACAGCCTCAATCTCATGTCCTCAAAAAACTCTGAGTTAATTTCTTTAAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCAATCTCATGTCCTCAAAAAACTCTGAGTTAATTTCTTTAAGA  1088

seq1  AGAAGGAAAAAGCAAAGCTTGGTGACTTGCCCAAGGCTCTATGGAGAATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAAAGCAAAGCTTGGTGACTTGCCCAAGGCTCTATGGAGAATT  1138

seq1  C  1151
      |
seq2  C  1139