BAC Information

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BAC

Clone NameB6Ng01-286J14
Chromosome14 (Build37)
Map Location 8,162,865 - 8,393,706
singlet/doubletdoublet
Overlap geneEG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874
Upstream geneLOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235
Downstream geneLOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286J14.bB6Ng01-286J14.g
ACCGA084753GA084754
length1,1591,139
definitionB6Ng01-286J14.b B6Ng01-286J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,392,583 - 8,393,706)(8,162,865 - 8,163,994)
sequence
gaattcctggcaaagagaaaggctgctataggtaactgtctgtcttgctt
gggagcacatgagctgtagaattgccatctctgcttttgatcctgcacag
gagactctcgagctctggttcttgctttctgccacttcacacaggagcct
ttagatttttctgttgtaaacctgtgggttgaaacactttttggggtaaa
aaaaaaaaggtcaaaggaccctttcacagaggttgtgtatcagacaatcc
tttatctcagacacttctattatggcttataacagtacaaaaattatagt
acccaagtagcaatgaaaataatcttaagtttgggaggtcactgcattaa
agcatccacagcatttggtaaattgagaaaccctggtcttgacagaagaa
ctatttgtatcatgtgaggtcttcttgacccccggggctgagtcaggatc
tgtagagagctagttaccagcagacacatatatagcaagtattccccttg
tttctcctttccaattcatagtgcctttgcccattccttcgtgatgtttc
tccattaggatggacaggtagggacaactgtagtccacttcttcttttta
ggaaacatggatccctcttagtgttgggacttttggaagtagcatgagtg
tttctggaatttgctgttctctaatttttgctttctgagtgcagctcacc
tagatgtcctgagttcttatctaggtcttcctgagaaccagggtctggtg
gggttgatggtgtttctttataagttaataggaaaaggatagcaggggct
tttgtatgcattggggtgttttgcagaaacctgcagagccacctttctga
tgggaactgaatcagctgaagaagaaggtagacatttctgaggaggtaca
gggaataagaaagtgctgggaagatgagggcactggtgcttgcagtactt
tgtgggacttaaagggggcttcataaggaccaaataggaaagaggccagt
tgactttccagaggtcaggaaacaaacaggtatgagacagggcagctttt
gtccaggcctaatggtttaagcctccatctggccgttgtaccttcttagg
acgaggctcattccaacttactggttgctttcatccattattctttactc
catcccaca
gaattcagtgttcatcctgtgttaaggcatggcccaagaagcaaataatg
tgctgaattgaggattcaataatgatgtgcaaacaggctgtatcatggac
tacccaaaccaattgcatgccaaatcctagttccttaaaactgggtcccc
ttggtgctaattaaacttactatcctgggcagagatcagcagagccaggg
gaccaaatggagctagctgatcttcaagagcttcctgggcaagcatgtag
gaatagactacttctatgacaattttccaatacactgtgccacaggcatg
ggtccaataggtatctgtaatgactttcctcttatttttaaggcagggat
tctcattccttggttcctgttgttatgtgaattcccagaggacacaacta
gtatttacaggagaaaggctttatcacacctcctcccccaggagattccc
atgtgacaccaaggaaacaccaggaagaaacttccctggtgatcactttg
gacctctatggactcacactaacaggaaatgcaaactgtgcatcacacaa
atcctcagaccccatcaaaggtcccagagtctcagtcctgaacaaaacac
acacagctaagttcacacacatagacacaattagaatgccaaataaatcc
agggaggttccatctctcagaatataatgaacaatatcagagtaaacgtg
tgatagcctgcaggcattgcatacacacagagagacagtaagtatgagca
ggtccttccagctgttgacagcaacaatcagatttgcaagcaccccaagg
tcaagtacataagaagatgataataaacacagagcacttttgtttatcca
acaattaaacacctgtcaaggctacttaattgaatgatgggaagattgac
acactccattcatggaaggaaattgggttaacagatggcacatacaggca
acagggtactgggaataattcctacctgttagttcaaatcttcatacaat
gttaaacgttcaggattccacacatttcctccatgtcattgctgatcttc
ctcattatgcaatttcagttctcttactttattttataatttaataattc
tgatagtgatgttgttatttcggttgaagtatttctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8392583_8393706
seq2: B6Ng01-286J14.b_44_1202 (reverse)

seq1  TGTGTGGAT-GAGTAA--GATAATGGATGAAAGCA--CAGGTAGGTGG-A  44
      |||| |||| ||||||   ||||||||||||||||  |||  || ||| |
seq2  TGTG-GGATGGAGTAAAGAATAATGGATGAAAGCAACCAGTAAGTTGGAA  49

seq1  TGAG-CTCGTC--TAGAAGTTACAA-GGGCAGATGGA-GCT--AACCATT  87
      |||| ||||||   ||||| ||||| || |||||||| |||  |||||||
seq2  TGAGCCTCGTCCTAAGAAGGTACAACGGCCAGATGGAGGCTTAAACCATT  99

seq1  A-GCCT-GAC-AAAGCTG-CCTGTCTC-TACCTGTT--GTTCCTGA-CTC  129
      | |||| ||| ||||||| |||||||| ||||||||   ||||||| |||
seq2  AGGCCTGGACAAAAGCTGCCCTGTCTCATACCTGTTTGTTTCCTGACCTC  149

seq1  TGG-AAGTC-ACTGGCCTC-TTCCTA-TTGGTCCTTATGGAG-CCCCTTT  174
      ||| ||||| ||||||||| |||||| |||||||||||| || |||||||
seq2  TGGAAAGTCAACTGGCCTCTTTCCTATTTGGTCCTTATGAAGCCCCCTTT  199

seq1  AAGTCCCAC-AAGTACTGC-AGCACCAGTG-CCTCATCTT-CCAGCACTT  220
      ||||||||| ||||||||| |||||||||| ||||||||| |||||||||
seq2  AAGTCCCACAAAGTACTGCAAGCACCAGTGCCCTCATCTTCCCAGCACTT  249

seq1  TCTTATT-CCTGTGCCTCCTCAG-CATGTGTACCTTCTTCTTCAGCTGAT  268
      ||||||| ||||| |||||||||  |||| ||||||||||||||||||||
seq2  TCTTATTCCCTGTACCTCCTCAGAAATGTCTACCTTCTTCTTCAGCTGAT  299

seq1  TCAGTT-CCATCAG-AAGGTGGCTCTGCAGGTTTCTGC-AAACA-CCCAA  314
      |||||| ||||||| ||||||||||||||||||||||| ||||| |||||
seq2  TCAGTTCCCATCAGAAAGGTGGCTCTGCAGGTTTCTGCAAAACACCCCAA  349

seq1  TGCATAC-AAAGCCCCTGCTATCCTTTTCCTATTAACTTGT-AAGAAACA  362
      ||||||| ||||||||||||||||||||||||||||||| | ||||||||
seq2  TGCATACAAAAGCCCCTGCTATCCTTTTCCTATTAACTTATAAAGAAACA  399

seq1  CCATCAACCCCACCAGACCCTGGTTCTCAGGAAGACCTAGATAAGAACTC  412
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAACCCCACCAGACCCTGGTTCTCAGGAAGACCTAGATAAGAACTC  449

seq1  AGGACATCTAGGTGAGCTGCACTCAGAAAGCAAAAATTAGAGAACAGCAA  462
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATCTAGGTGAGCTGCACTCAGAAAGCAAAAATTAGAGAACAGCAA  499

seq1  ATTCCAGAAACACTCATGCTACTTCCAAAAGTCCCAACACTAAGAGGGAT  512
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAAACACTCATGCTACTTCCAAAAGTCCCAACACTAAGAGGGAT  549

seq1  CCATGTTTCCTAAAAAGAAGAAGTGGACTACAGTTGTCCCTACCTGTCCA  562
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTTCCTAAAAAGAAGAAGTGGACTACAGTTGTCCCTACCTGTCCA  599

seq1  TCCTAATGGAGAAACATCACGAAGGAATGGGCAAAGGCACTATGAATTGG  612
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATGGAGAAACATCACGAAGGAATGGGCAAAGGCACTATGAATTGG  649

seq1  AAAGGAGAAACAAGGGGAATACTTGCTACATATGGGTCTGCTGGTAACTA  662
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  AAAGGAGAAACAAGGGGAATACTTGCTATATATGTGTCTGCTGGTAACTA  699

seq1  GCTCTCTACAGATCCTGACTCAGCCCCGGGGGTCAAGAAGACCTCACATG  712
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTACAGATCCTGACTCAGCCCCGGGGGTCAAGAAGACCTCACATG  749

seq1  ATACAAATAGTTCTTCTGTCAAGACCAGGGTTTCTCAATTTACCAAATGC  762
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATAGTTCTTCTGTCAAGACCAGGGTTTCTCAATTTACCAAATGC  799

seq1  TGTGGATGCTTTAATGCAGTGACCTCCCAAACTTAAGATTATTTTCATTG  812
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATGCTTTAATGCAGTGACCTCCCAAACTTAAGATTATTTTCATTG  849

seq1  CTACTTGGGTACTATAATTTTTGTACTGTTATAAGCCATAATAGAAGTGT  862
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGGGTACTATAATTTTTGTACTGTTATAAGCCATAATAGAAGTGT  899

seq1  CTGAGATAAAGGATTGTCTGATACACAACCTCTGTGAAAGGGTCCTTTGA  912
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATAAAGGATTGTCTGATACACAACCTCTGTGAAAGGGTCCTTTGA  949

seq1  CCTTTTTTTTTTTTTACCCCAAAAAGTGTTTCAACCCACAGGTTTACAAC  962
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CC--TTTTTTTTTTTACCCCAAAAAGTGTTTCAACCCACAGGTTTACAAC  997

seq1  AGAAAAATCTAAAGGCTCCTGTGTGAAGTGGCAGAAAGCAAGAACCAGAG  1012
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATCTAAAGGCTCCTGTGTGAAGTGGCAGAAAGCAAGAACCAGAG  1047

seq1  CTCGAGAGTCTCCTGTGCAGGATCAAAAGCAGAGATGGCAATTCTACAGC  1062
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAGAGTCTCCTGTGCAGGATCAAAAGCAGAGATGGCAATTCTACAGC  1097

seq1  TCATGTGCTCCCAAGCAAGACAGACAGTTACCTATAGCAGCCTTTCTCTT  1112
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCTCCCAAGCAAGACAGACAGTTACCTATAGCAGCCTTTCTCTT  1147

seq1  TGCCAGGAATTC  1124
      ||||||||||||
seq2  TGCCAGGAATTC  1159

seq1: chr14_8162865_8163994
seq2: B6Ng01-286J14.g_69_1207

seq1  GAATTCAGTGTTCATCCTGTGTTAAGGCATGGCCCAAGAAGCAAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTCATCCTGTGTTAAGGCATGGCCCAAGAAGCAAATAATG  50

seq1  TGCTGAATTGAGGATTCAATAATCATGTGCAAACAGGCTGTATCATGGAC  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCTGAATTGAGGATTCAATAATGATGTGCAAACAGGCTGTATCATGGAC  100

seq1  TACCCAAACCAATTGCATGCCAAATCCTAGTTCCTTAAAACTGGGTCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAACCAATTGCATGCCAAATCCTAGTTCCTTAAAACTGGGTCCCC  150

seq1  TTGGTGCTAATTAAACTTACTATCCTGGGCAGAGATCAGCAGAGCCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTAATTAAACTTACTATCCTGGGCAGAGATCAGCAGAGCCAGGG  200

seq1  GACCAAATGGAGCTAGCTGATCTTCAAGAGCTTCCTGGGCAAGCATGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAATGGAGCTAGCTGATCTTCAAGAGCTTCCTGGGCAAGCATGTAG  250

seq1  GAATAGACTACTTCTATGACAATTTTCCAATACACTGTGCCACAGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACTACTTCTATGACAATTTTCCAATACACTGTGCCACAGGCATG  300

seq1  GGTCCAATAGGTATCTGTAATGACTTTCCTCTTATTTTTAAGGCAGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAATAGGTATCTGTAATGACTTTCCTCTTATTTTTAAGGCAGGGAT  350

seq1  TCTCATTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCTTGGTTCCTGTTGTTATGTGAATTCCCAGAGGACACAACTA  400

seq1  GTATTTACAGGAGAATGGCTTTATCACACCTCCTCCCCCAGGAGATTCCC  450
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTATTTACAGGAGAAAGGCTTTATCACACCTCCTCCCCCAGGAGATTCCC  450

seq1  ATGTGACACCAAGGAAACACCAGGAAGAAACTTCCCTGGTGATCACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACACCAAGGAAACACCAGGAAGAAACTTCCCTGGTGATCACTTTG  500

seq1  GACCTCTATGGACTCACACTAACAGGAAATGCAAACTGTGCATCACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTATGGACTCACACTAACAGGAAATGCAAACTGTGCATCACACAA  550

seq1  ATCCTCAGACCCCATCAAAGGTCCCAGAGTCTCAGTCCTGAACAAAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGACCCCATCAAAGGTCCCAGAGTCTCAGTCCTGAACAAAACAC  600

seq1  ACACAGCTAAGTTCACACACATAGACACAATTAGAATGCCAAATAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTAAGTTCACACACATAGACACAATTAGAATGCCAAATAAATCC  650

seq1  AGGGAGGTTCCATCTCTCAGAATATAATGAACAATATCAGAGTAAACGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGTTCCATCTCTCAGAATATAATGAACAATATCAGAGTAAACGTG  700

seq1  TGTTAGCCTGCAGGCATTGCATACACACAGAGAGACAGTAAGTATGAGCA  750
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCCTGCAGGCATTGCATACACACAGAGAGACAGTAAGTATGAGCA  750

seq1  GGTCCTTCCAGCTGTTGACAGCAACAATCAGA-TTGCAAGCACCCCAAGG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTCCTTCCAGCTGTTGACAGCAACAATCAGATTTGCAAGCACCCCAAGG  800

seq1  TCAAGTACATAAGAAGATGATAATAAACACAGAGCAC-TTTGTTTATCCA  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAAGTACATAAGAAGATGATAATAAACACAGAGCACTTTTGTTTATCCA  850

seq1  ACAATTAAACACCTGTCAGGGCTACTTAATTGAATGATGGG-AGA-TGAC  896
      |||||||||||||||||| |||||||||||||||||||||| ||| ||||
seq2  ACAATTAAACACCTGTCAAGGCTACTTAATTGAATGATGGGAAGATTGAC  900

seq1  ACACTCCATTCATGGAAGGAAATTGGGTTAACAGATGGCACAATACAGGC  946
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACACTCCATTCATGGAAGGAAATTGGGTTAACAGATGGCAC-ATACAGGC  949

seq1  AACAGGGTACTGGGAATAATTCCTACCTG-TAGTTCAAATCCTCATAC-A  994
      ||||||||||||||||||||||||||||| ||||||||||| |||||| |
seq2  AACAGGGTACTGGGAATAATTCCTACCTGTTAGTTCAAATCTTCATACAA  999

seq1  TG-TAAACGTTCAGGATTCCACACATTTCCTCCATGTCATTGCTGATCTT  1043
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAACGTTCAGGATTCCACACATTTCCTCCATGTCATTGCTGATCTT  1049

seq1  CCTCA-TATGCAATTTCAGTTCTCTAACTTTA-TTTAT-ATTTAATA--T  1088
      ||||| ||||||||||||||||||| |||||| ||||| ||||||||  |
seq2  CCTCATTATGCAATTTCAGTTCTCTTACTTTATTTTATAATTTAATAATT  1099

seq1  CTGATTAGTGATGTTGTAATTTTGGGTTGAAGTATTTCTAGC  1130
      |||| |||||||||||| | ||| ||||||||||||||||||
seq2  CTGA-TAGTGATGTTGTTA-TTTCGGTTGAAGTATTTCTAGC  1139