BAC Information

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BAC

Clone NameB6Ng01-286L10
Chromosome14 (Build37)
Map Location 105,659,140 - 105,776,662
singlet/doubletdoublet
Overlap geneNdfip2
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466
Downstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286L10.bB6Ng01-286L10.g
ACCGA084835GA084836
length1,1981,116
definitionB6Ng01-286L10.b B6Ng01-286L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,775,469 - 105,776,662)(105,659,140 - 105,660,236)
sequence
gaattccagttgctgtcaggggttaagagggcccctggaacatatgccat
tagcttcacactgagggaaacgtgggcctctctgctaggctggttacgct
tctccatagtcaaatggtcactgccccagaaagccatgttgcttcagttc
cagagaaaacacacagctggcatgcagctgtggtatagcgtacctccata
tgcctaaggtgaaaggttctggtgaccccagccctagtacctagatgagt
ggtgatggccttgtcacctgcagatcccaaggggatctaacctgtagtat
ccatccatatccagccactgtcctcaaactctccagacccaggcctacaa
agaatccctctgagactgtcatcccacccaaaaaaccgactgcttccttt
tttttaactagtgcgtcattcaactctcttcttgtttattcctttggaag
tgtcttttctataggatctggagagatttacttattctattttaaactat
tttcttatataacattggctctaaaattatgcttttttaattattattat
tataaagagcttttctaacatcacggagattgctcagggggtaaagacac
ttggtgacctgcagaggaacctctgaactatgtaaagatgggaattgaat
tccacaactttttccctgacctcccatgccctacttaaacatacacacgt
gtacacacgcaataattaacttttacgcctttatttgtataaatgtattt
cttaacacaatactaaataacacctaatgtttatgttaactatcctttaa
aatggataaaagacccgtgtgtggtcatgaatagataaaggagaagcaat
gaatttggaaaagaacaagtattgtgcattctgtctcatgtgtggaaaca
acaacaattcactgtgaatgtacaagagtaaaagaccagagagtagaaag
aaaaagagggaaaagggaggcggggctggattccatcagagcgcattgca
tacatgtgttgagaataccaccactcaacctcattaataagtacaagtaa
gaacatccctaatcaaatttcatgtaattatcaggcagtccagctattta
ttatgattctgaaggagaaagaaagcctaggactgaagaagtcctcatta
aattagcggtctgagtactggctccatcttggccaatgttgcttcttt
gaattctctgtcatttgtgtctatttgctatagcatggccaggtgattta
gattatgaactttctgaaaattatcaacattttcagaatggcttaggaaa
tagaaatcttgccagtttattgaaggtgcttttcaagttgtcagctttgg
gtaactttatattttttaaaagacattgttccctttctaagtgtttgcaa
aaaaaaaaaaagccacgtaattttatcattgatacttgttttacttctca
aatcttacccacttctgtttgtgtctctaagtgatataatttgatttgaa
ttctttctttgggttgcttttccttattgggctcaaccatggatgatact
taaaatagtgttaatagttttaatttattatattgtctcttttgcttttg
atggaggtaactagttgagactatttttttctctcaaaatctcttcagat
aatgttggagtttacttttgtctaaactttgaaagaaggtataaaatact
acatttttttcccttcaaaactgaagctgtgtcctataaagactttgagt
gggtggagccactctgtaagggcagagggcagaaatcagtcattctaaat
aaattatttcttttagatagaatattattttttatggggagaagcattgg
agaattttattatagtctaaatttgtattttcattcttttacttttgtgg
ttacatagtaagtttcgtgtgtttaggatgataaactgccctcctccctt
tttttttttgcgagtagctttgtctgggaaaacggcatagatacaactga
gtttgagttttgcgtagactcggtagctggggttcagtctggaagcttag
cttatgtaatgggcatgcctgttttatggctacctttaggtcaggcctta
tttttgaaactctagaatgattaataaactggaagcagtaaaacaacttt
tgttagcgatgatgaagtcaagaagatagggaactgtacaatagggggtg
aaaaaacacacttgtgcctgtgtggaatttatctcttaatttaaagaagc
taaaacctcagctctgcaatactggtgatgccttggtgatcgaatgctac
tgtccttaaatccacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105775469_105776662
seq2: B6Ng01-286L10.b_46_1243 (reverse)

seq1  AAAGAAGC-ACA-TGGCCAAGGATGGAGCAGGTACTCAGGGACCTTATTT  48
      |||||||| ||| ||||||| ||||||||  ||||||||    || ||||
seq2  AAAGAAGCAACATTGGCCAA-GATGGAGCCAGTACTCAGACCGCTAATTT  49

seq1  TAAATGAGGAC-TCTTCAGGTCTTAGGCTTTCTTTCT-CTTCAG-ATCAT  95
        ||||||||| |||||| ||| |||||||||||||| |||||| |||||
seq2  --AATGAGGACTTCTTCA-GTCCTAGGCTTTCTTTCTCCTTCAGAATCAT  96

seq1  AATAAATAGCTGGAACTGCTTGATAATTACATGAAATTTTGATTA-GGAT  144
      ||||||||||||| ||||| |||||||||||||||| |||||||| ||||
seq2  AATAAATAGCTGG-ACTGCCTGATAATTACATGAAA-TTTGATTAGGGAT  144

seq1  G-TCTTACTTGTACTTATTAATGAGGTTGAGT-GTGGTA-TCTCAACACA  191
      | |||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  GTTCTTACTTGTACTTATTAATGAGGTTGAGTGGTGGTATTCTCAACACA  194

seq1  TGTATGCAATGCGCTCTGATGGAATCCAGCCCCGCCT-CCTTTTCCCTCT  240
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTATGCAATGCGCTCTGATGGAATCCAGCCCCGCCTCCCTTTTCCCTCT  244

seq1  TTTTCTTTCTACTCTCTGGTCTTTTACTCTTGTACATTCACAGTGAATTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTACTCTCTGGTCTTTTACTCTTGTACATTCACAGTGAATTG  294

seq1  TTGTTGTTTCCACACATGAGACAGAATGCACAATACTTGTTCTTTTCCAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTCCACACATGAGACAGAATGCACAATACTTGTTCTTTTCCAA  344

seq1  ATTCATTGCTTCTCCTTTATCTATTCATGACCACACACGGGTCTTTTATC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGCTTCTCCTTTATCTATTCATGACCACACACGGGTCTTTTATC  394

seq1  CATTTTAAAGGATAGTTAACATAAACATTAGGTGTTATTTAGTATTGTGT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAGGATAGTTAACATAAACATTAGGTGTTATTTAGTATTGTGT  444

seq1  TAAGAAATACATTTATACAAATAAAGGCGTAAAAGTTAATTATTGCGTGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATACATTTATACAAATAAAGGCGTAAAAGTTAATTATTGCGTGT  494

seq1  GTACACGTGTGTATGTTTAAGTAGGGCATGGGAGGTCAGGGAAAAAGTTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACGTGTGTATGTTTAAGTAGGGCATGGGAGGTCAGGGAAAAAGTTG  544

seq1  TGGAATTCAATTCCCATCTTTACATAGTTCAGAGGTTCCTCTGCAGGTCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCAATTCCCATCTTTACATAGTTCAGAGGTTCCTCTGCAGGTCA  594

seq1  CCAAGTGTCTTTACCCCCTGAGCAATCTCCGTGATGTTAGAAAAGCTCTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTCTTTACCCCCTGAGCAATCTCCGTGATGTTAGAAAAGCTCTT  644

seq1  TATAATAATAATAATTAAAAAAGCATAATTTTAGAGCCAATGTTATATAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATAATAATTAAAAAAGCATAATTTTAGAGCCAATGTTATATAA  694

seq1  GAAAATAGTTTAAAATAGAATAAGTAAATCTCTCCAGATCCTATAGAAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGTTTAAAATAGAATAAGTAAATCTCTCCAGATCCTATAGAAAA  744

seq1  GACACTTCCAAAGGAATAAACAAGAAGAGAGTTGAATGACGCACTAGTTA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCCAAAGGAATAAACAAGAAGAGAGTTGAATGACGCACTAGTTA  794

seq1  AAAAAAAGGAAGCAGTCGGTTTTTTGGGTGGGATGACAGTCTCAGAGGGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGAAGCAGTCGGTTTTTTGGGTGGGATGACAGTCTCAGAGGGA  844

seq1  TTCTTTGTAGGCCTGGGTCTGGAGAGTTTGAGGACAGTGGCTGGATATGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTAGGCCTGGGTCTGGAGAGTTTGAGGACAGTGGCTGGATATGG  894

seq1  ATGGATACTACAGGTTAGATCCCCTTGGGATCTGCAGGTGACAAGGCCAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACTACAGGTTAGATCCCCTTGGGATCTGCAGGTGACAAGGCCAT  944

seq1  CACCACTCATCTAGGTACTAGGGCTGGGGTCACCAGAACCTTTCACCTTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTCATCTAGGTACTAGGGCTGGGGTCACCAGAACCTTTCACCTTA  994

seq1  GGCATATGGAGGTACGCTATACCACAGCTGCATGCCAGCTGTGTGTTTTC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGGAGGTACGCTATACCACAGCTGCATGCCAGCTGTGTGTTTTC  1044

seq1  TCTGGAACTGAAGCAACATGGCTTTCTGGGGCAGTGACCATTTGACTATG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAACTGAAGCAACATGGCTTTCTGGGGCAGTGACCATTTGACTATG  1094

seq1  GAGAAGCGTAACCAGCCTAGCAGAGAGGCCCACGTTTCCCTCAGTGTGAA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCGTAACCAGCCTAGCAGAGAGGCCCACGTTTCCCTCAGTGTGAA  1144

seq1  GCTAATGGCATATGTTCCAGGGGCCCTCTTAACCCCTGACAGCAACTGGA  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGGCATATGTTCCAGGGGCCCTCTTAACCCCTGACAGCAACTGGA  1194

seq1  ATTC  1194
      ||||
seq2  ATTC  1198

seq1: chr14_105659140_105660236
seq2: B6Ng01-286L10.g_72_1187

seq1  GAATTCTCTGTCATTTGTGTCTATTTGCTATAGCATGGCCAGGTGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCATTTGTGTCTATTTGCTATAGCATGGCCAGGTGATTTA  50

seq1  GATTATGAACTTTCTGAAAATTATCAACATTTTCAGAATGGCTTAGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGAACTTTCTGAAAATTATCAACATTTTCAGAATGGCTTAGGAAA  100

seq1  TAGAAATCTTGCCAGTTTATTGAAGGTGCTTTTCAAGTTGTCAGCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTTGCCAGTTTATTGAAGGTGCTTTTCAAGTTGTCAGCTTTGG  150

seq1  GTAACTTTATATTTTTTAAAAGACATTGTTCCCTTTCTAAGTGTTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTTATATTTTTTAAAAGACATTGTTCCCTTTCTAAGTGTTTGCAA  200

seq1  AAAAAAAAAAAGCCACGTAATTTTATCATTGATACTTGTTTTACTTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGCCACGTAATTTTATCATTGATACTTGTTTTACTTCTCA  250

seq1  AATCTTACCCACTTCTGTTTGTGTCTCTAAGTGATATAATTTGATTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACCCACTTCTGTTTGTGTCTCTAAGTGATATAATTTGATTTGAA  300

seq1  TTCTTTCTTTGGGTTGCTTTTCCTTATTGGGCTCAACCATGGATGATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTGGGTTGCTTTTCCTTATTGGGCTCAACCATGGATGATACT  350

seq1  TAAAATAGTGTTAATAGTTTTAATTTATTATATTGTCTCTTTTGCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGTGTTAATAGTTTTAATTTATTATATTGTCTCTTTTGCTTTTG  400

seq1  ATGGAGGTAACTAGTTGAGACTATTTTTTTCTCTCAAAATCTCTTCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTAACTAGTTGAGACTATTTTTTTCTCTCAAAATCTCTTCAGAT  450

seq1  AATGTTGGAGTTTACTTTTGTCTAAACTTTGAAAGAAGGTATAAAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGAGTTTACTTTTGTCTAAACTTTGAAAGAAGGTATAAAATACT  500

seq1  ACATTTTTTTCCCTTCAAAACTGAAGCTGTGTCCTATAAAGACTTTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTTCCCTTCAAAACTGAAGCTGTGTCCTATAAAGACTTTGAGT  550

seq1  GGGTGGAGCCACTCTGTAAGGGCAGAGGGCAGAAATCAGTCATTCTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGAGCCACTCTGTAAGGGCAGAGGGCAGAAATCAGTCATTCTAAAT  600

seq1  AAATTATTTCTTTTAGATAGAATATTATTTTTTATGGGGAGAAGCATTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTCTTTTAGATAGAATATTATTTTTTATGGGGAGAAGCATTGG  650

seq1  AGAATTTTATTATAGTCTAAATTTGTATTTTCATTCTTTTACTTTTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTATTATAGTCTAAATTTGTATTTTCATTCTTTTACTTTTGTGG  700

seq1  TTACATAGTAAG-TTCGTGTGTTTAGGATGATAAACTGCCCTCCTCCC-T  748
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TTACATAGTAAGTTTCGTGTGTTTAGGATGATAAACTGCCCTCCTCCCTT  750

seq1  TTTTTTTTTGCGAGTAGCTTTGTCTGGGAAAACGGCATAGATACAACTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGCGAGTAGCTTTGTCTGGGAAAACGGCATAGATACAACTGA  800

seq1  GTTTGAGTTTTGCGTAGACTCGGTAGCTGGGGTTCAGTCTGGAAGCTTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTTTTGCGTAGACTCGGTAGCTGGGGTTCAGTCTGGAAGCTTAG  850

seq1  CTTATGTAATGGGCATGCCTGTTTTATGGCTACCTTTAGGTCAGGCCTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTAATGGGCATGCCTGTTTTATGGCTACCTTTAGGTCAGGCCTTA  900

seq1  -TTTTGAAACTCTAGAATGATTAATAAACTGG-AGCAGT-AAACAAC-TT  944
       ||||||||||||||||||||||||||||||| |||||| ||||||| ||
seq2  TTTTTGAAACTCTAGAATGATTAATAAACTGGAAGCAGTAAAACAACTTT  950

seq1  TGTTAGCGATGATGAGGTC-AGGAGATAGGGAACTGTAC-ATA-GGGGTG  991
      ||||||||||||||| ||| || |||||||||||||||| ||| ||||||
seq2  TGTTAGCGATGATGAAGTCAAGAAGATAGGGAACTGTACAATAGGGGGTG  1000

seq1  AGAA---ACAC-TGTG-CTGTGTGG-ATTTA-CTCTT-ATTTAAAG-AGC  1032
      | ||   |||| |||| |||||||| ||||| ||||| |||||||| |||
seq2  AAAAAACACACTTGTGCCTGTGTGGAATTTATCTCTTAATTTAAAGAAGC  1050

seq1  TAAAA-CTCAGCTCTGC-ATACTGGTGATGCC-TGGTGATCAGAATGGCT  1079
      ||||| ||||||||||| |||||||||||||| |||||||| |||||   
seq2  TAAAACCTCAGCTCTGCAATACTGGTGATGCCTTGGTGATC-GAATG--C  1097

seq1  TACTGT-CTTTAATCCACG  1097
      |||||| ||| ||||||||
seq2  TACTGTCCTTAAATCCACG  1116