BAC Information

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BAC

Clone NameB6Ng01-287O10
Chromosome14 (Build37)
Map Location 85,372,328 - 85,373,445
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287O10.bB6Ng01-287O10.g
ACCGA085703GA085704
length1,2221,093
definitionB6Ng01-287O10.b B6Ng01-287O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgctcacatcattgcagagggcaaactctgctatatgactc
cacctgtggacatcaagtggtagagagaaaaaggaagagactatgtattt
tatttctttcactgcgtgaagtttcctttttctctccttttattttcaca
gagtgaattgcacaggatagccttaaaattacaatcttcttgactcatca
tcccgagtagctgggattagaaatgggtaaccaccatgaattttaataag
aaaggcataatgaattcttcaacttctctcttctacagtcagtatctgtc
actttgtcacactgctttatgccccatatgctactacagactcctctttc
ccaaaagctactaggtaaaatattagtctattgttatcttactatgtgtt
catttgtaataatttccacattgatatacatttactgtactgatattgtg
catgtccattccagaaatattagattgttaatctcctttttgaatgaaaa
attaatccttatatctttgtcatttttaatttgttattttatttatttac
aattcaaacggtatccaccttcctggtttcccctctgcaaaccccctatc
acattcccctttcccatacttctgtgaggaagctctaacacctacccatc
ctctcacagccctagtgcttctctacactggggcattgagccttcacagg
accaagggcctcccctcccattaatgctagacaaggcaatcctttactaa
acaagcagtgagagccatgggccacttcatgtgtactctttggttagtgc
ttttgttcctggaagctcttggggtctggtttttttatattattgttctt
cgtaaagggttgcaaaccccttcagctccttcagtcctttctctagctcc
tccattggggtcccaatgttcagtcttatagttgactgtgagcagcatct
gtattggtcaagatctggcaaagcctctaaggaaaataggcatactgggc
tcctgtcagcaagctgttcttgaacatcagcatagtgtctgggtttgggt
ctgcagatgtaatagaatctaaggtggggcagtctcggaatggccttttc
ttcagaaatctgctccacactctttgtcctgtattcccaatggacgaaac
caattcgggaatccaatcctgacctcagcggtactaactgagcaaaatat
accatagaacagacgcacgtga

gaattctttttcctaactgggatgccttgtctagtctcggtaaacgttgc
acgtactcccatttcaatgcaaatgtgggttaatatttgtaggaaggctt
catttctctgaagagcaaaggagaggggagaaaagagtaaggggcagggt
gtcggggacagaggaaaaagatgtaaagtgaattaactaaaggaaaatac
tgtgaacaagaataggctaatattaattatttaaatatacaaataaacac
acacacacacatatatattacaaattgtagttgtgctttgtatacaaaca
tgtttagacagatgtcaaattgttcctcttttcaactaaatgtacaacat
aattctgaagctgtatttataactttataagccgtagtaaatggttgagt
attttatactgaatattgcctgtaaagttgtttgttaatttattagttga
agaacaatatagcaactttcataaaaaaaaaacattattgtgtactaatg
attttttttattttgttgtcattctgaaggaaatatggaacattgtccct
ttcaatcaaaagagaaaggtcagttagttctgtataatttacacaattac
tctttcatcgagttattctccacagcttagacagaatatgctttgctcct
cttgcacacagttgcactctacaacttacactatgtcagacagtgaagtg
gtgagtttattaaagtactaaacaagactgacaaggccctgccatgttgg
agcttgcattttggagagagtgacagataatacaataagcaagtgattca
atcacacttaatggagcaaaggctttagattcaacagaaccaccctggac
ctccataaccctgccaagctaaagccagaggggaatgttctagtcctggt
gaaaggacaggcatagctcctaaggcactgagtcatctcttagcagtgat
gtctgaattttcagatacatacatacacagcaaacttgataaaaaaaaaa
caaacaacttgtagtacagagatttatacattgcattcttgataagtttc
atgtagtaaggctatagcctgaaagtgtgccaatagaacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85372328_85373445
seq2: B6Ng01-287O10.g_67_1159

seq1  GAATTCTTTTTCCTAACTGGGATGCCTTGTCTAGTCTCGGTAAACGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCCTAACTGGGATGCCTTGTCTAGTCTCGGTAAACGTTGC  50

seq1  ACGTACTCCCATTTCAATGCAAATGTGGGTTAATATTTGTAGGAAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTCCCATTTCAATGCAAATGTGGGTTAATATTTGTAGGAAGGCTT  100

seq1  CATTTCTCTGAAGAGCAAAGGAGAGGGGAGAAAAGAGTAAGGGGCAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCTGAAGAGCAAAGGAGAGGGGAGAAAAGAGTAAGGGGCAGGGT  150

seq1  GTCGGGGACAGAGGAAAAAGATGTAAAGTGAATTAACTAAAGGAAAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGGGACAGAGGAAAAAGATGTAAAGTGAATTAACTAAAGGAAAATAC  200

seq1  TGTGAACAAGAATAGGCTAATATTAATTATTTAAATATACAAATAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACAAGAATAGGCTAATATTAATTATTTAAATATACAAATAAACAC  250

seq1  ACACACACACATATATATTACAAATTGTAGTTGTGCTTTGTATACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATATATATTACAAATTGTAGTTGTGCTTTGTATACAAACA  300

seq1  TGTTTAGACAGATGTCAAATTGTTCCTCTTTTCAACTAAATGTACAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGACAGATGTCAAATTGTTCCTCTTTTCAACTAAATGTACAACAT  350

seq1  AATTCTGAAGCTGTATTTATAACTTTATAAGCCGTAGTAAATGGTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAAGCTGTATTTATAACTTTATAAGCCGTAGTAAATGGTTGAGT  400

seq1  ATTTTATACTGAATATTGCCTGTAAAGTTGTTTGTTAATTTATTAGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACTGAATATTGCCTGTAAAGTTGTTTGTTAATTTATTAGTTGA  450

seq1  AGAACAATATAGCAACTTTCATAAAAAAAAAACATTATTGTGTACTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATATAGCAACTTTCATAAAAAAAAAACATTATTGTGTACTAATG  500

seq1  ATTTTTTTTATTTTGTTGTCATTCTGAAGGAAATATGGAACATTGTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTATTTTGTTGTCATTCTGAAGGAAATATGGAACATTGTCCCT  550

seq1  TTCAATCAAAAGAGAAAGGTCAGTTAGTTCTGTATAATTTACACAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCAAAAGAGAAAGGTCAGTTAGTTCTGTATAATTTACACAATTAC  600

seq1  TCTTTCATCGAGTTATTCTCCACAGCTTAGACAGAATATGCTTTGCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATCGAGTTATTCTCCACAGCTTAGACAGAATATGCTTTGCTCCT  650

seq1  CTTGCACACAGTTGCACTCTACAACTTACACTATGTCAGACAGTGAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACACAGTTGCACTCTACAACTTACACTATGTCAGACAGTGAAGTG  700

seq1  GTGAGTTTATTAAAGTACTAAACAAGACTGACAAGGCCCTGCCATGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTATTAAAGTACTAAACAAGACTGACAAGGCCCTGCCATGTTGG  750

seq1  AGCTTGCATTTTGGAGAGAGTGACAGATAATACAATAAGCAAGTGATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCATTTTGGAGAGAGTGACAGATAATACAATAAGCAAGTGATTCA  800

seq1  ATCACACTTAATGGGAGCAAAGGCTTTAGATTCAACAGAACCACCCTGGA  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCACACTTAAT-GGAGCAAAGGCTTTAGATTCAACAGAACCACCCTGGA  849

seq1  CCTCCATAACCCTGCCAAGCTAAAGCCAGAGGGGAATGTTCTAGTCCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATAACCCTGCCAAGCTAAAGCCAGAGGGGAATGTTCTAGTCCTGG  899

seq1  TGAAAGGACAGGCATAGCTCCTAAGGCACTGAGGTCATCTCTTAGCAGTG  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAAAGGACAGGCATAGCTCCTAAGGCACTGA-GTCATCTCTTAGCAGTG  948

seq1  ATGTCTGAATTTTCAGATACATACCATACACAAGGCAAACTTGATTAAAA  1000
      ||||||||||||||||||||||| ||||||||  |||||||||| |||||
seq2  ATGTCTGAATTTTCAGATACATA-CATACACA--GCAAACTTGA-TAAAA  994

seq1  AAAAAACAAAAACAACTTGTTAGTTACAGAGAAATTTAATACATTTGCAT  1050
      |||||||  |||||||||| ||| ||||||||   || ||||| ||||| 
seq2  AAAAAAC--AAACAACTTG-TAG-TACAGAGA---TTTATACA-TTGCA-  1035

seq1  TTCTTGGATAAAGTTTCCAATGTTAGTTTAGGGGCTATAGCTTGAAAGTT  1100
      ||||| ||| |||||||  ||| ||||     ||||||||| ||||||| 
seq2  TTCTT-GAT-AAGTTTC--ATG-TAGT---AAGGCTATAGCCTGAAAGT-  1076

seq1  GGTG-CAATAGAACCAAAA  1118
       ||| ||||||||| ||| 
seq2  -GTGCCAATAGAACAAAA-  1093


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