BAC Information

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BAC

Clone NameB6Ng01-288E01
Chromosome14 (Build37)
Map Location 46,009,762 - 46,010,934
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1
Downstream genePlekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288E01.bB6Ng01-288E01.g
ACCGA085965GA085966
length1,1761,209
definitionB6Ng01-288E01.b B6Ng01-288E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagaccaaggtcttgctaaggacgaactaggactgttggaaca
ctggtggaaggcttaagccatgtcagaattcaattttaaaaagcacttat
aataggaaaatactgaaagagagcacgtggatccatacactagactaacg
caggaatggaacgcgggaatgaaaaattactgtatgggtagggaatgcta
gactccaggagaagagcttccttgaaactcttttgcctcatgagtgactt
ttaagcctttcggcttgtccagttgactcgaccggagagcgtagcacctt
agcaaatatgttatcccaacactacaacgcttgatatgcagagggcacaa
cacgtggtcagcgggtgaatggctgcactgatgtggggagatatccacca
tataaattcagaatacagttcacatgtattgtgctgccctgagtgaaagg
agagacaggggattgtaaaagacgtagcggtgctcactaactatgccctg
ttccagttagctagcagttttaggcaaggctgtgtttactaattggccag
tcattgtgagtggaacatcagcctgagttaatcggtaaaggtctacctgt
gattttctagtctcttttcattaaagatatgatttatttcagagtatagt
atttttgtgacagggtggtctgggcccctatgagattgcatcgagtaatt
acgctgccatttctgagtaagacatgcagttaactaacaggttttgttgc
actggaatttgggtagatgttcctcatttcaccatactgtagtttattcc
ttctacacacacatacatgtacacaaactagcatcttaagcacatattac
aggccaggatacatgttgaatgtttatttgtattgctttattagaccgtc
acagtgtcagattaggtaccagataccaccaaagattaggaagctgtgtc
acaaatgttcaaagccacaagtaaaatgggaagcacagcaaaggaaattc
cacataatccgaagaacatttctatgagctgttaacattattgtatctac
aggcgaagccatggggacacatgacttttttattctgtattctcggatgg
ctgcaagtttaaaataaggcaaaaataatgtaagtagacactttaaaaaa
caaaatatcttggctggcgaatggct
gaattctgggtcagaaattctaacagtgggttggtaaccccatccctcta
cctgatgccctgtctatctcctagaggtagactcttctggttccctttcc
ccaatgttgagcatttcatcaaagatcactcccattgagtcctgcaagtc
tctcacctcccaggtctctggtactttctagagtgtccccccaccctacc
cccaaggctgcatatttccatttattctgctggccctctgggcttctcac
attgcccctcatgcttgatcctgttctccttttcccctctccttcccctc
tcccacccaggttcctccatccctctgcctcccatgattatttttgtccc
ccttctaagtgggattgaagcatccttacttgggcacttctgctttttaa
acttcttaaattctgtgagttgtagcctaggtgttctgtactttttggct
aatatccacttgttaatgaatacatactatatatgtacttttgggtctgg
gttacctcaatcaggatgatattttctagttccatccatttgcctgcaaa
aaaaaacatgatatcctcgttcttaataggtaaatagtattccattgtgt
aaatgaaccacatttttctgtattcattctttggttgaaggacatctggg
tttccaggttctggctattacaaataaagtcgctatgaacatagtggaac
atagtccctctggcatggtggaacatatttttgggtatatgctcaggagt
ggtatagctgggtcttcaagtagatctatttccagtcttctaaagaactg
ccagattggtttccagagtggttgtacagggtttgaaatctcctaccagc
aacgaaagagtgttctttctttcaccagatccttgccagcatgtttctgt
cacctgaaggttttgatcttagcccttctgatgggtgtaaggtggaatct
catgggttgttttgatttgtgtttccctgatgacgaaagacttttgacat
tttctttaaaaagctttttgccattcaggacctccttctcttggtaattc
tctgtttggctctctaatggtctatttagtcttttcggaaggttaagtgg
tcttgaagtctctattaattttggaattataggccccctgtccaagtgaa
gcctgagtgactactgtttgagttattttatgtctgctcctctcttgaca
tggtagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_46009762_46010934
seq2: B6Ng01-288E01.b_47_1222 (reverse)

seq1  AGCCATCCCGCCAGCCAAAATA-TTTGTTTTTTAA--TGTCTTACTACAT  47
      ||||||  |||||||||| ||| ||||||||||||  |||||   |||||
seq2  AGCCAT-TCGCCAGCCAAGATATTTTGTTTTTTAAAGTGTCTACTTACAT  49

seq1  TATTTT--GCTTATTTTAAAACTTGCAG-CATCAGAGAAATACAGAAT-A  93
      ||||||   |||||||| |||||||||| |||| ||| |||||||||| |
seq2  TATTTTTGCCTTATTTT-AAACTTGCAGCCATCCGAG-AATACAGAATAA  97

seq1  AAAAGTCATGTGTCCCCATGGCTTCGCCTGTAGAATTAACATTATGTTAA  143
      ||||||||||||||||||||||||||||||||||  ||  || |||||||
seq2  AAAAGTCATGTGTCCCCATGGCTTCGCCTGTAGA--TACAATAATGTTAA  145

seq1  CAGCTTGGTAGAAATG-TCTTCGGATTATGT-GAATTTCCTTTGCTGTGC  191
      |||| |  |||||||| |||||||||||||| ||||||||||||||||||
seq2  CAGC-TCATAGAAATGTTCTTCGGATTATGTGGAATTTCCTTTGCTGTGC  194

seq1  TT-CCATTTTACTTGTGGCTTTGAACATTTGTGACACAGCTTCCTAATCT  240
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTTTACTTGTGGCTTTGAACATTTGTGACACAGCTTCCTAATCT  244

seq1  TTGGTGGTATCTGGTACCTAATCTGACACTGTGACGGTCTAATAAAGCAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTATCTGGTACCTAATCTGACACTGTGACGGTCTAATAAAGCAA  294

seq1  TACAAATAAAACATTCAACATGTATCCTGGCCTGTAATATGTGCTTAAGA  340
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAT-AAACATTCAACATGTATCCTGGCCTGTAATATGTGCTTAAGA  343

seq1  TGCTAGTTTGTGTACATGTATGTGTGTGTAGAAGGAATAAACTACAGTAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTTTGTGTACATGTATGTGTGTGTAGAAGGAATAAACTACAGTAT  393

seq1  GGTGAAATGAGGAACATCTACCCAAATTCCAGTGCAACAAAACCTGTTAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAATGAGGAACATCTACCCAAATTCCAGTGCAACAAAACCTGTTAG  443

seq1  TTAACTGCATGTCTTACTCAGAAATGGCAGCGTAATTACTCGATGCAATC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGCATGTCTTACTCAGAAATGGCAGCGTAATTACTCGATGCAATC  493

seq1  TCATAGGGGCCCAGACCACCCTGTCACAAAAATACTATACTCTGAAATAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGGGCCCAGACCACCCTGTCACAAAAATACTATACTCTGAAATAA  543

seq1  ATCATATCTTTAATGAAAAGAGACTAGAAAATCACAGGTAGACCTTTACC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCTTTAATGAAAAGAGACTAGAAAATCACAGGTAGACCTTTACC  593

seq1  GATTAACTCAGGCTGATGTTCCACTCACAATGACTGGCCAATTAGTAAAC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACTCAGGCTGATGTTCCACTCACAATGACTGGCCAATTAGTAAAC  643

seq1  ACAGCCTTGCCTAAAACTGCTAGCTAACTGGAACAGGGCATAGTTAGTGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTGCCTAAAACTGCTAGCTAACTGGAACAGGGCATAGTTAGTGA  693

seq1  GCACCGCTACGTCTTTTACAATCCCCTGTCTCTCCTTTCACTCAGGGCAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCGCTACGTCTTTTACAATCCCCTGTCTCTCCTTTCACTCAGGGCAG  743

seq1  CACAATACATGTGAACTGTATTCTGAATTTATATGGTGGATATCTCCCCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATACATGTGAACTGTATTCTGAATTTATATGGTGGATATCTCCCCA  793

seq1  CATCAGTGCAGCCATTCACCCGCTGACCACGTGTTGTGCCCTCTGCATAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGCAGCCATTCACCCGCTGACCACGTGTTGTGCCCTCTGCATAT  843

seq1  CAAGCGTTGTAGTGTTGGGATAACATATTTGCTAAGGTGCTACGCTCTCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGTTGTAGTGTTGGGATAACATATTTGCTAAGGTGCTACGCTCTCC  893

seq1  GGTCGAGTCAACTGGACAAGCCGAAAGGCTTAAAAGTCACTCATGAGGCA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGAGTCAACTGGACAAGCCGAAAGGCTTAAAAGTCACTCATGAGGCA  943

seq1  AAAGAGTTTCAAGGAAGCTCTTCTCCTGGAGTCTAGCATTCCCTACCCAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTCAAGGAAGCTCTTCTCCTGGAGTCTAGCATTCCCTACCCAT  993

seq1  ACAGTAATTTTTCATTCCCGCGTTCCATTCCTGCGTTAGTCTAGTGTATG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAATTTTTCATTCCCGCGTTCCATTCCTGCGTTAGTCTAGTGTATG  1043

seq1  GATCCACGTGCTCTCTTTCAGTATTTTCCTATTATAAGTGCTTTTTAAAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCACGTGCTCTCTTTCAGTATTTTCCTATTATAAGTGCTTTTTAAAA  1093

seq1  TTGAATTCTGACATGGCTTAAGCCTTCCACCAGTGTTCCAACAGTCCTAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCTGACATGGCTTAAGCCTTCCACCAGTGTTCCAACAGTCCTAG  1143

seq1  TTCGTCCTTAGCAAGACCTTGGTCTTGGAATTC  1173
      |||||||||||||||||||||||||||||||||
seq2  TTCGTCCTTAGCAAGACCTTGGTCTTGGAATTC  1176