BAC Information

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BAC

Clone NameB6Ng01-291H17
Chromosome14 (Build37)
Map Location 67,626,235 - 67,838,313
singlet/doubletdoublet
Overlap geneBnip3l, Ppp2r2a
Upstream geneGulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614
Downstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291H17.bB6Ng01-291H17.g
ACCGA088353GA088354
length9341,129
definitionB6Ng01-291H17.b B6Ng01-291H17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,837,378 - 67,838,313)(67,626,235 - 67,627,370)
sequence
gaattctttctcttcagtgtggacatcagcatgtcaggagcaaagtgggt
gagagagggcagcagtgcccttggccttgggcagggcattggaacacacc
gcagcgccatccaggggcagccatggagggtcccacggtgagctttgggg
cctcactcttcttaagtctgtcagcttcctgttacagacacagaacttcc
gggcaagttccttttcctctcagagcaacaggagtccgttcttttcctcc
tttcgttgcttcttcttatttctctttccttcctctttcttgttcttctt
cctcattccttcttccctctgttcttcctatatcgtttgcagcactgggt
tctgaaccccggacctcaagcatgctgggaaagtgctactccactgagct
acatccctagccagagccagtttctgatgcgtgaagctgaagtatcctgg
cccacacagcaggaaagcttttcacttacagctagatctacacccttaag
atgtgcttattaaactaggtgtggtgatgaacacctttaatcccagcaca
caggaggcagaaacaggaggaccactgtgaattcaaggctagcctggtct
acgtagtaagtttcagaacagccaaggcttcgtagcaattttctttgtaa
agaaaattatgtgtgcaaaatttcatgttgtatgaatttatgtgcattgt
atgtgtaccagtgccagctaaggcccaaagagggctaatgagggcaaact
tacaggtggttttgagctcccatgtgggtactaagagccagggtcttctg
aaagagtagtatatactcttgaatactaagctatttttccagacccaata
aaaacacatgattttatttatgtgtttttgtctgtgtatatgtttgtata
tgtatatgtatctatgtgtatgtatggggggtgt
gaattctttgttccttattttttggttttgttgttttctgacacaaagtt
ttattctggggaccacgcttactacacttccctagtgcttgaatgacagg
caagtggcaccacacctggctaaaatacccaaacgctcctgccactatcc
tctagactcagtaacagctcttccctaaaccgttctggccaccctggaag
ccatccctcttatgaaagacactgcctgacctttaagcatacaaatggct
tttaaagaacttcatctggccctgtgacaactaccaccacccactacctc
tttcattaagacatgaaatccaaacagaaaggttgggcaagaaggtccgg
cgatctcacaacaacagcggacactctggggacaagatgtctgtttgact
gcaactggatcctgaccatcaactttcaattgctagtacctgtggcctgc
gtctgttgtgttgtttactgtatttcctgaagttcactgcagatttggct
gaaatggacgtgatcctagggcatgtgctgggcacccaatccatttaaca
taagaaacagcacttgaaaagttactagtatggtggctgccgcctgtcac
ccaagaacttgggaaagtggaaagtaggagggatcaggtcactcagcaac
acaacgagtgaggccagcctgggctacatgagaagctctctcaaaaaaaa
aaaaaaagaaagaaaaagaaaagaaaaagcagtaaaatatgaattcaagg
ttaacagcaacaaaaaactcacttgagaaacttgggaattttcagactaa
aaaaaaaaaaaagataaatgtcaggggcggagcaagcaccctgcacgaaa
ctccgatgaccccctggaccggcgtgtggtaagaggcgagctccgcaagc
acacctgcgcggccgcacgtccaccccgccacgcccgaccggtcgcgtcc
atcccccggtgtccccgccgcacgtcccatgctccccttcgctgggccag
cctcggcttgccaccccgaagttggcgtgcgcctcggctccggacgccca
cgcgaaccctacttcggcgcccagcgcagctggagtcagcgtcgagcgcc
tgctctaaccggaggcgccgctgtcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67837378_67838313
seq2: B6Ng01-291H17.b_51_984 (reverse)

seq1  ACACACCCCCATACATACACATAGATACATATACAATATACAAACATATA  50
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAC-CCCCCATACATACACATAGATACATATAC-ATATACAAACATATA  48

seq1  CACAGACAAAAACACATAAATAAAATCATGTGTTTTTATTGGGTCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAAAAACACATAAATAAAATCATGTGTTTTTATTGGGTCTGGAA  98

seq1  AAATAGCTTAGTATTCAAGAGTATATACTACTCTTTCAGAAGACCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCTTAGTATTCAAGAGTATATACTACTCTTTCAGAAGACCCTGGC  148

seq1  TCTTAGTACCCACATGGGAGCTCAAAACCACCTGTAAGTTTGCCCTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTACCCACATGGGAGCTCAAAACCACCTGTAAGTTTGCCCTCATT  198

seq1  AGCCCTCTTTGGGCCTTAGCTGGCACTGGTACACATACAATGCACATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTTTGGGCCTTAGCTGGCACTGGTACACATACAATGCACATAAA  248

seq1  TTCATACAACATGAAATTTTGCACACATAATTTTCTTTACAAAGAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACAACATGAAATTTTGCACACATAATTTTCTTTACAAAGAAAATT  298

seq1  GCTACGAAGCCTTGGCTGTTCTGAAACTTACTACGTAGACCAGGCTAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGAAGCCTTGGCTGTTCTGAAACTTACTACGTAGACCAGGCTAGCC  348

seq1  TTGAATTCACAGTGGTCCTCCTGTTTCTGCCTCCTGTGTGCTGGGATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCACAGTGGTCCTCCTGTTTCTGCCTCCTGTGTGCTGGGATTAA  398

seq1  AGGTGTTCATCACCACACCTAGTTTAATAAGCACATCTTAAGGGTGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTCATCACCACACCTAGTTTAATAAGCACATCTTAAGGGTGTAGA  448

seq1  TCTAGCTGTAAGTGAAAAGCTTTCCTGCTGTGTGGGCCAGGATACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGTAAGTGAAAAGCTTTCCTGCTGTGTGGGCCAGGATACTTCAG  498

seq1  CTTCACGCATCAGAAACTGGCTCTGGCTAGGGATGTAGCTCAGTGGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACGCATCAGAAACTGGCTCTGGCTAGGGATGTAGCTCAGTGGAGTA  548

seq1  GCACTTTCCCAGCATGCTTGAGGTCCGGGGTTCAGAACCCAGTGCTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTCCCAGCATGCTTGAGGTCCGGGGTTCAGAACCCAGTGCTGCAA  598

seq1  ACGATATAGGAAGAACAGAGGGAAGAAGGAATGAGGAAGAAGAACAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATATAGGAAGAACAGAGGGAAGAAGGAATGAGGAAGAAGAACAAGAA  648

seq1  AGAGGAAGGAAAGAGAAATAAGAAGAAGCAACGAAAGGAGGAAAAGAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGAAAGAGAAATAAGAAGAAGCAACGAAAGGAGGAAAAGAACG  698

seq1  GACTCCTGTTGCTCTGAGAGGAAAAGGAACTTGCCCGGAAGTTCTGTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGTTGCTCTGAGAGGAAAAGGAACTTGCCCGGAAGTTCTGTGTC  748

seq1  TGTAACAGGAAGCTGACAGACTTAAGAAGAGTGAGGCCCCAAAGCTCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGGAAGCTGACAGACTTAAGAAGAGTGAGGCCCCAAAGCTCACC  798

seq1  GTGGGACCCTCCATGGCTGCCCCTGGATGGCGCTGCGGTGTGTTCCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACCCTCCATGGCTGCCCCTGGATGGCGCTGCGGTGTGTTCCAATG  848

seq1  CCCTGCCCAAGGCCAAGGGCACTGCTGCCCTCTCTCACCCACTTTGCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCAAGGCCAAGGGCACTGCTGCCCTCTCTCACCCACTTTGCTCC  898

seq1  TGACATGCTGATGTCCACACTGAAGAGAAAGAATTC  936
      ||||||||||||||||||||||||||||||||||||
seq2  TGACATGCTGATGTCCACACTGAAGAGAAAGAATTC  934

seq1: chr14_67626235_67627370
seq2: B6Ng01-291H17.g_67_1195

seq1  GAATTCTTTGTTCCTTATTTTTTGGTTTTGTTGTTTTCTGACACAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCCTTATTTTTTGGTTTTGTTGTTTTCTGACACAAAGTT  50

seq1  TTATTCTGGGGACCACGCTTACTACACTTCCCTAGTGCTTGAATGACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGGGGACCACGCTTACTACACTTCCCTAGTGCTTGAATGACAGG  100

seq1  CAAGTGGCACCACACCTGGCTAAAATACCCAAACGCTCCTGCCACTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGCACCACACCTGGCTAAAATACCCAAACGCTCCTGCCACTATCC  150

seq1  TCTAGACTCAGTAACAGCTCTTCCCTAAACCGTTCTGGCCACCCTGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTCAGTAACAGCTCTTCCCTAAACCGTTCTGGCCACCCTGGAAG  200

seq1  CCATCCCTCTTATGAAAGACACTGCCTGACCTTTAAGCATACAAATGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTCTTATGAAAGACACTGCCTGACCTTTAAGCATACAAATGGCT  250

seq1  TTTAAAGAACTTCATCTGGCCCTGTGACAACTACCACCACCCACTACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAACTTCATCTGGCCCTGTGACAACTACCACCACCCACTACCTC  300

seq1  TTTCATTAAGACATGAAATCCAAACAGAAAGGTTGGGCAAGAAGGTCCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAAGACATGAAATCCAAACAGAAAGGTTGGGCAAGAAGGTCCGG  350

seq1  CGATCTCACAACAACAGCGGACACTCTGGGGACAAGATGTCTGTTTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTCACAACAACAGCGGACACTCTGGGGACAAGATGTCTGTTTGACT  400

seq1  GCAACTGGATCCTGACCATCAACTTTCAATTGCTAGTACCTGTGGCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGGATCCTGACCATCAACTTTCAATTGCTAGTACCTGTGGCCTGC  450

seq1  GTCTGTTGTGTTGTTTACTGTATTTCCTGAAGTTCACTGCAGATTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTGTGTTGTTTACTGTATTTCCTGAAGTTCACTGCAGATTTGGCT  500

seq1  GAAATGGACGTGATCCTAGGGCATGTGCTGGGCACCCAATCCATTTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGACGTGATCCTAGGGCATGTGCTGGGCACCCAATCCATTTAACA  550

seq1  TAAGAAACAGCACTTGAAAAGTTACTAGTATGGTGGCTGCCGCCTGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACAGCACTTGAAAAGTTACTAGTATGGTGGCTGCCGCCTGTCAC  600

seq1  CCAAGAACTTGGGAAAGTGGAAAGTAGGAGGGATCAGGTCACTCAGCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACTTGGGAAAGTGGAAAGTAGGAGGGATCAGGTCACTCAGCAAC  650

seq1  ACAACGAGTGAGGCCAGCCTGGGCTACATGAGAAGCTCTCTCAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGAGTGAGGCCAGCCTGGGCTACATGAGAAGCTCTCTCAAAAAAAA  700

seq1  AAAAAAAGAAAGAAAAAGAAAAGAAAAAGCAGTAAAATATGAATTCAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAGAAAAAGAAAAGAAAAAGCAGTAAAATATGAATTCAAGG  750

seq1  TTAACAGCAACAAAAAACTCACTTGAGAAACTTGGGAATTTTCAGACTAA  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTAACAGCAACAAAAAACTCACTTGAGAAACTTGGGAATTTTCAGACT-A  799

seq1  AAAAAAAAAAAAAGATAAATGTCAGGGGCGGAGCAAGCACCCTGCACGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGATAAATGTCAGGGGCGGAGCAAGCACCCTGCACGAA  849

seq1  ACTCCGATGACCCCCTGGACCGGCGTGTGGTAGGAGGCGAGCTCCGCAAG  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTCCGATGACCCCCTGGACCGGCGTGTGGTAAGAGGCGAGCTCCGCAAG  899

seq1  CACACCTGCGCGGCCGCACGTCCA-CCCGCCACGCCCGACCGGTCGCGTC  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACACCTGCGCGGCCGCACGTCCACCCCGCCACGCCCGACCGGTCGCGTC  949

seq1  CATCCCCCGGTGTCCCCGCCGCACGTCCCATGCTCCCCCTCCGCT-GGCC  998
      |||||||||||||||||||||||||||||||||| ||||| |||| ||||
seq2  CATCCCCCGGTGTCCCCGCCGCACGTCCCATGCT-CCCCTTCGCTGGGCC  998

seq1  AGCCTCCGCTTGCCACCCCG-AGTT-GCGTGCGCCTCCGGCTCCCGACGC  1046
      |||||| ||||||||||||| |||| |||||||||| ||||||| |||||
seq2  AGCCTCGGCTTGCCACCCCGAAGTTGGCGTGCGCCT-CGGCTCCGGACGC  1047

seq1  CCACCGCG-ACCCTAAACCTCGGCGCCCAAGGCGCAGGCCGCGAGCCAGC  1095
      ||| |||| |||||  || ||||||||||  ||||||  |  ||| ||||
seq2  CCA-CGCGAACCCT--ACTTCGGCGCCCA--GCGCAG--CTGGAGTCAGC  1090

seq1  GCCGAGCGCCTGCTCCTAACCGGAGCGCGCCGCTGTCAGTC  1136
      | |||||||||||| |||||||||| |||||||||||||||
seq2  GTCGAGCGCCTGCT-CTAACCGGAG-GCGCCGCTGTCAGTC  1129